RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH11X-208	ENST00000504220	KRI1	Q8N9T8	703 aa	Known RBP	4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	DNAAF4	Q8WXU2	420 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	ERO1A	Q96HE7	468 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	GDAP1L1	Q96MZ0	367 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	PLIN2	Q99541	437 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	SLC26A6	Q9BXS9	759 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	ARFGAP3	Q9NP61	516 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	ECHDC1	Q9NTX5	307 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	TMOD3	Q9NYL9	352 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	ZNF219	Q9P2Y4	722 aa	Predicted RBP	4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	DDX25	Q9UHL0	483 aa	Known RBP	4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	HEY1	Q9Y5J3	304 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	TLL2	Q9Y6L7	1015 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	WDR17	Q8IZU2	1322 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	COL3A1	P02461	1466 aa	Predicted RBP	4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	TMEM247	A6NEH6	219 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	GOLGA8A	A7E2F4	631 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	CAVIN2	O95810	425 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	MYC	P01106	439 aa	Predicted RBP	4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	IDO1	P14902	403 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	CA8	P35219	290 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	ZNF76	P36508	570 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	RNASE9	P60153	205 aa	Known RBP	4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	CCZ1B	P86790	482 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	CCZ1	P86791	482 aa	Predicted RBP	4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	PPID	Q08752	370 aa	Known RBP	4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	ANKRD39	Q53RE8	183 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	C6orf132	Q5T0Z8	1188 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	TRIM65	Q6PJ69	517 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	C6orf89	Q6UWU4	347 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	C3orf62	Q6ZUJ4	267 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	PLA2G4D	Q86XP0	818 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	ANKRD18A	Q8IVF6	992 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	SLAIN1	Q8ND83	568 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	FAM200A	Q8TCP9	573 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	TCF12	Q99081	682 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	IER2	Q9BTL4	223 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	PUS3	Q9BZE2	481 aa	Known RBP	4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	ODF2L	Q9ULJ1	636 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	GMEB1	Q9Y692	573 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	GJA3	Q9Y6H8	435 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	KLF18	A0A0U1RQI7	1052 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	TLDC2	A0PJX2	215 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	CDK2AP1	O14519	115 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	ATP8B1	O43520	1251 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	AKR1B10	O60218	316 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	YY1	P25490	414 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	IL13	P35225	146 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	IARS	P41252	1262 aa	Known RBP	4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	PEX5	P50542	639 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	PAPOLA	P51003	745 aa	Known RBP	4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	NLRP5	P59047	1200 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	TYRO3	Q06418	890 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220		Q4G0T1	1027 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	GJC2	Q5T442	439 aa	Predicted RBP	4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	DAB2IP	Q5VWQ8	1189 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	OTUD7B	Q6GQQ9	843 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	IFNL2	Q8IZJ0	200 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	NSUN7	Q8NE18	718 aa	Known RBP	4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	RHPN1	Q8TCX5	695 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	MKNK2	Q9HBH9	465 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	WDR6	Q9NNW5	1121 aa	Known RBP	4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	SH2B1	Q9NRF2	756 aa	Predicted RBP	4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	IFNK	Q9P0W0	207 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	VPS18	Q9P253	973 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	GABBR1	Q9UBS5	961 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	RBM8A	Q9Y5S9	174 aa	Known RBP	4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	SLC12A7	Q9Y666	1083 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	FLT4	P35916	1363 aa		4.07	□□□□□ -1.76
PCDH11X-208	ENST00000504220	OVOS2	A0A0G2JMS6	1433 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220		A0A1B0GVL5	298 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	SPDYE5	A6NIY4	337 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	KIF2A	O00139	706 aa	Predicted RBP	4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	GADD45B	O75293	160 aa	Predicted RBP	4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	DGKI	O75912	1065 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	SLC34A2	O95436	690 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	VIL1	P09327	827 aa	Known RBP	4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	CDK4	P11802	303 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	ALAS1	P13196	640 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	SYK	P43405	635 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	AK2	P54819	239 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	NUCB1	Q02818	461 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	STX1A	Q16623	288 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	KIAA1614	Q5VZ46	1190 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	CCDC102B	Q68D86	513 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	LVRN	Q6Q4G3	990 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	PCGF5	Q86SE9	256 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	KSR1	Q8IVT5	923 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	LINS1	Q8NG48	757 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	CACTIN	Q8WUQ7	758 aa	Known RBP	4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	BHMT	Q93088	406 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	ALS2CR12	Q96Q35	445 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	UTP14A	Q9BVJ6	771 aa	Known RBP	4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	GBP3	Q9H0R5	595 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	DCAF16	Q9NXF7	216 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	TSKS	Q9UJT2	592 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	MAP3K2	Q9Y2U5	619 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	PCDHB2	Q9Y5E7	798 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	COMMD10	Q9Y6G5	202 aa		4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms