RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 EEF1GP26641 437 aaKnown RBP17.74■□□□□ 0.43
HMGXB3-202ENST00000503427 FAM26FQ5R3K3 315 aa17.74■□□□□ 0.43
HMGXB3-202ENST00000503427 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.74■□□□□ 0.43
HMGXB3-202ENST00000503427 COA1Q9GZY4 146 aa17.74■□□□□ 0.43
HMGXB3-202ENST00000503427 PPANQ9NQ55 473 aaKnown RBP17.74■□□□□ 0.43
HMGXB3-202ENST00000503427 PIH1D3Q9NQM4 214 aaKnown RBP17.74■□□□□ 0.43
HMGXB3-202ENST00000503427 NOD1Q9Y239 953 aa17.74■□□□□ 0.43
HMGXB3-202ENST00000503427 EPHA10Q5JZY3 1008 aa17.74■□□□□ 0.43
HMGXB3-202ENST00000503427 PCDHA4Q9UN74 947 aa17.74■□□□□ 0.43
HMGXB3-202ENST00000503427 AGLP35573 1532 aa17.74■□□□□ 0.43
HMGXB3-202ENST00000503427 PRKAB2O43741 272 aa17.74■□□□□ 0.43
HMGXB3-202ENST00000503427 CAPS2Q9BXY5 557 aa17.74■□□□□ 0.43
HMGXB3-202ENST00000503427 HOMER3Q9NSC5 361 aa17.74■□□□□ 0.43
HMGXB3-202ENST00000503427 CLTCQ00610 1675 aaKnown RBP17.73■□□□□ 0.43
HMGXB3-202ENST00000503427 BUB1O43683 1085 aa17.73■□□□□ 0.43
HMGXB3-202ENST00000503427 N4BP1O75113 896 aaKnown RBP17.73■□□□□ 0.43
HMGXB3-202ENST00000503427 H2AFZP0C0S5 128 aa17.73■□□□□ 0.43
HMGXB3-202ENST00000503427 HSPA1LP34931 641 aa17.73■□□□□ 0.43
HMGXB3-202ENST00000503427 ZNF131P52739 623 aa17.73■□□□□ 0.43
HMGXB3-202ENST00000503427 POLR2FP61218 127 aaKnown RBP17.73■□□□□ 0.43
HMGXB3-202ENST00000503427 GKAP1Q5VSY0 366 aaPredicted RBP17.73■□□□□ 0.43
HMGXB3-202ENST00000503427 H2AFVQ71UI9 128 aa17.73■□□□□ 0.43
HMGXB3-202ENST00000503427 SLC39A2Q9NP94 309 aa17.73■□□□□ 0.43
HMGXB3-202ENST00000503427 SLC5A4Q9NY91 659 aa17.73■□□□□ 0.43
HMGXB3-202ENST00000503427 ECM2O94769 699 aaPredicted RBP17.73■□□□□ 0.43
HMGXB3-202ENST00000503427 TSNAXIP1Q2TAA8 658 aa17.73■□□□□ 0.43
HMGXB3-202ENST00000503427 SULF1Q8IWU6 871 aa17.73■□□□□ 0.43
HMGXB3-202ENST00000503427 TUBGCP2Q9BSJ2 902 aa17.73■□□□□ 0.43
HMGXB3-202ENST00000503427 NRKQ7Z2Y5 1582 aa17.73■□□□□ 0.43
HMGXB3-202ENST00000503427 CRB1P82279 1406 aa17.73■□□□□ 0.43
HMGXB3-202ENST00000503427 PTPRUQ92729 1446 aa17.73■□□□□ 0.43
HMGXB3-202ENST00000503427 TESPA1A2RU30 521 aaPredicted RBP17.73■□□□□ 0.43
HMGXB3-202ENST00000503427 ABCB4P21439 1286 aa17.73■□□□□ 0.43
HMGXB3-202ENST00000503427 MRPS9P82933 396 aaKnown RBP17.73■□□□□ 0.43
HMGXB3-202ENST00000503427 CCDC93Q567U6 631 aa17.73■□□□□ 0.43
HMGXB3-202ENST00000503427 RDH13Q8NBN7 331 aa17.73■□□□□ 0.43
HMGXB3-202ENST00000503427 RETREG2Q8NC44 543 aa17.73■□□□□ 0.43
HMGXB3-202ENST00000503427 P3H4Q92791 437 aa17.73■□□□□ 0.43
HMGXB3-202ENST00000503427 TEKT3Q9BXF9 490 aa17.73■□□□□ 0.43
HMGXB3-202ENST00000503427 C1orf167Q5SNV9 1468 aa17.73■□□□□ 0.43
HMGXB3-202ENST00000503427 H0YCG3 227 aa17.72■□□□□ 0.43
HMGXB3-202ENST00000503427 CYP19A1P11511 503 aaPredicted RBP17.72■□□□□ 0.43
HMGXB3-202ENST00000503427 SMC1BQ8NDV3 1235 aa17.72■□□□□ 0.43
HMGXB3-202ENST00000503427 TTC16Q8NEE8 873 aa17.72■□□□□ 0.43
HMGXB3-202ENST00000503427 CYP2J2P51589 502 aa17.72■□□□□ 0.43
HMGXB3-202ENST00000503427 RESTQ13127 1097 aa17.72■□□□□ 0.43
HMGXB3-202ENST00000503427 ADAM9Q13443 819 aa17.72■□□□□ 0.43
HMGXB3-202ENST00000503427 PLA2G4DQ86XP0 818 aa17.72■□□□□ 0.43
HMGXB3-202ENST00000503427 VPS52Q8N1B4 723 aa17.72■□□□□ 0.43
HMGXB3-202ENST00000503427 DCPSQ96C86 337 aaKnown RBP17.72■□□□□ 0.43
HMGXB3-202ENST00000503427 DHTKD1Q96HY7 919 aaPredicted RBP17.72■□□□□ 0.43
HMGXB3-202ENST00000503427 AK8Q96MA6 479 aa17.72■□□□□ 0.43
HMGXB3-202ENST00000503427 PLEKHA4Q9H4M7 779 aa17.72■□□□□ 0.43
HMGXB3-202ENST00000503427 COL4A3BPQ9Y5P4 624 aa17.72■□□□□ 0.43
HMGXB3-202ENST00000503427 COL15A1P39059 1388 aa17.72■□□□□ 0.43
HMGXB3-202ENST00000503427 RFX7Q2KHR2 1363 aa17.72■□□□□ 0.43
HMGXB3-202ENST00000503427 MECOMQ03112 1051 aa17.72■□□□□ 0.43
HMGXB3-202ENST00000503427 RASA3Q14644 834 aa17.72■□□□□ 0.43
HMGXB3-202ENST00000503427 SLC35F6Q8N357 371 aa17.72■□□□□ 0.43
HMGXB3-202ENST00000503427 ARHGEF2Q92974 986 aaKnown RBP17.72■□□□□ 0.43
HMGXB3-202ENST00000503427 CNOT6LQ96LI5 555 aaKnown RBP17.72■□□□□ 0.43
HMGXB3-202ENST00000503427 DBNDD1Q9H9R9 158 aa17.72■□□□□ 0.43
HMGXB3-202ENST00000503427 NOL3O60936 208 aaKnown RBP17.72■□□□□ 0.43
HMGXB3-202ENST00000503427 CD19P15391 556 aa17.72■□□□□ 0.43
HMGXB3-202ENST00000503427 MCAMP43121 646 aa17.72■□□□□ 0.43
HMGXB3-202ENST00000503427 ARHGAP27Q6ZUM4 889 aa17.72■□□□□ 0.43
HMGXB3-202ENST00000503427 FNBP4Q8N3X1 1017 aaPredicted RBP17.72■□□□□ 0.43
HMGXB3-202ENST00000503427 BRIP1Q9BX63 1249 aa17.72■□□□□ 0.43
HMGXB3-202ENST00000503427 ZSWIM5Q9P217 1185 aa17.72■□□□□ 0.43
HMGXB3-202ENST00000503427 PTPRMP28827 1452 aa17.72■□□□□ 0.43
HMGXB3-202ENST00000503427 I3L4J1 428 aa17.71■□□□□ 0.43
HMGXB3-202ENST00000503427 GCFC2P16383 781 aaKnown RBP17.71■□□□□ 0.43
HMGXB3-202ENST00000503427 STX2P32856 288 aa17.71■□□□□ 0.43
HMGXB3-202ENST00000503427 GLG1Q92896 1179 aa17.71■□□□□ 0.43
HMGXB3-202ENST00000503427 ISCA1Q9BUE6 129 aa17.71■□□□□ 0.43
HMGXB3-202ENST00000503427 TRIM6Q9C030 488 aaPredicted RBP17.71■□□□□ 0.43
HMGXB3-202ENST00000503427 SLFN14P0C7P3 912 aa17.71■□□□□ 0.43
HMGXB3-202ENST00000503427 CLNS1AP54105 237 aaKnown RBP17.71■□□□□ 0.43
HMGXB3-202ENST00000503427 BCAS4Q8TDM0 211 aa17.71■□□□□ 0.43
HMGXB3-202ENST00000503427 GRK7Q8WTQ7 553 aa17.71■□□□□ 0.43
HMGXB3-202ENST00000503427 STRBPQ96SI9 672 aaKnown RBP17.71■□□□□ 0.43
HMGXB3-202ENST00000503427 PDE11AQ9HCR9 933 aa17.71■□□□□ 0.43
HMGXB3-202ENST00000503427 ENOX1Q8TC92 643 aaKnown RBP17.71■□□□□ 0.43
HMGXB3-202ENST00000503427 LARSQ9P2J5 1176 aaKnown RBP17.71■□□□□ 0.43
HMGXB3-202ENST00000503427 CCPG1Q9ULG6 757 aa17.71■□□□□ 0.43
HMGXB3-202ENST00000503427 RIMBP3CA6NJZ7 1639 aa17.71■□□□□ 0.43
HMGXB3-202ENST00000503427 RIMBP3BA6NNM3 1639 aa17.71■□□□□ 0.43
HMGXB3-202ENST00000503427 RIMBP3Q9UFD9 1639 aa17.71■□□□□ 0.43
HMGXB3-202ENST00000503427 TBC1D8O95759 1140 aa17.71■□□□□ 0.43
HMGXB3-202ENST00000503427 RASSF2P50749 326 aa17.71■□□□□ 0.43
HMGXB3-202ENST00000503427 TRIM28Q13263 835 aaKnown RBP17.71■□□□□ 0.43
HMGXB3-202ENST00000503427 GABPB2Q8TAK5 448 aaPredicted RBP17.71■□□□□ 0.43
HMGXB3-202ENST00000503427 BZW2Q9Y6E2 419 aaKnown RBP17.71■□□□□ 0.43
HMGXB3-202ENST00000503427 LARGE1O95461 756 aa17.71■□□□□ 0.42
HMGXB3-202ENST00000503427 TNNI1P19237 187 aa17.71■□□□□ 0.42
HMGXB3-202ENST00000503427 MASTLQ96GX5 879 aa17.71■□□□□ 0.42
HMGXB3-202ENST00000503427 VPS37BQ9H9H4 285 aa17.71■□□□□ 0.42
HMGXB3-202ENST00000503427 PI4KBQ9UBF8 816 aa17.71■□□□□ 0.42
HMGXB3-202ENST00000503427 ODF2LQ9ULJ1 636 aa17.71■□□□□ 0.42
HMGXB3-202ENST00000503427 HGSO14964 777 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms