RNA–Protein interactions for RNA: ENST00000502299.5

CLDND1-206, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-206ENST00000502299 FAM133AQ8N9E0 248 aa16.7■□□□□ 0.26
CLDND1-206ENST00000502299 FANCBQ8NB91 859 aa16.7■□□□□ 0.26
CLDND1-206ENST00000502299 RGS22Q8NE09 1264 aa16.7■□□□□ 0.26
CLDND1-206ENST00000502299 CLEC4DQ8WXI8 215 aa16.7■□□□□ 0.26
CLDND1-206ENST00000502299 TCEANC2Q96MN5 208 aa16.7■□□□□ 0.26
CLDND1-206ENST00000502299 AMNQ9BXJ7 453 aa16.7■□□□□ 0.26
CLDND1-206ENST00000502299 COL25A1Q9BXS0 654 aaPredicted RBP16.7■□□□□ 0.26
CLDND1-206ENST00000502299 CYP39A1Q9NYL5 469 aa16.7■□□□□ 0.26
CLDND1-206ENST00000502299 ATP11BQ9Y2G3 1177 aa16.7■□□□□ 0.26
CLDND1-206ENST00000502299 SPTBN5Q9NRC6 3674 aaKnown RBP16.69■□□□□ 0.26
CLDND1-206ENST00000502299 BAATQ14032 418 aaPredicted RBP16.69■□□□□ 0.26
CLDND1-206ENST00000502299 RNF207Q6ZRF8 634 aa16.69■□□□□ 0.26
CLDND1-206ENST00000502299 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.69■□□□□ 0.26
CLDND1-206ENST00000502299 FBXL16Q8N461 479 aa16.69■□□□□ 0.26
CLDND1-206ENST00000502299 ARRDC4Q8NCT1 418 aa16.69■□□□□ 0.26
CLDND1-206ENST00000502299 CNPY2Q9Y2B0 182 aa16.69■□□□□ 0.26
CLDND1-206ENST00000502299 MRPL11Q9Y3B7 192 aaKnown RBP16.69■□□□□ 0.26
CLDND1-206ENST00000502299 SYNGAP1Q96PV0 1343 aa16.69■□□□□ 0.26
CLDND1-206ENST00000502299 PNMA6FA0A0J9YX94 578 aa16.68■□□□□ 0.26
CLDND1-206ENST00000502299 PTPDC1A2A3K4 754 aa16.68■□□□□ 0.26
CLDND1-206ENST00000502299 ASB14A6NK59 587 aa16.68■□□□□ 0.26
CLDND1-206ENST00000502299 NFIBO00712 420 aa16.68■□□□□ 0.26
CLDND1-206ENST00000502299 SEPT4O43236 478 aa16.68■□□□□ 0.26
CLDND1-206ENST00000502299 CYTH3O43739 400 aa16.68■□□□□ 0.26
CLDND1-206ENST00000502299 CPA1P15085 419 aa16.68■□□□□ 0.26
CLDND1-206ENST00000502299 TAL1P17542 331 aaPredicted RBP16.68■□□□□ 0.26
CLDND1-206ENST00000502299 CASTP20810 708 aaKnown RBP16.68■□□□□ 0.26
CLDND1-206ENST00000502299 RPS6KB1P23443 525 aa16.68■□□□□ 0.26
CLDND1-206ENST00000502299 CNTN2Q02246 1040 aa16.68■□□□□ 0.26
CLDND1-206ENST00000502299 SNX17Q15036 470 aa16.68■□□□□ 0.26
CLDND1-206ENST00000502299 SHHQ15465 462 aa16.68■□□□□ 0.26
CLDND1-206ENST00000502299 C9orf50Q5SZB4 431 aa16.68■□□□□ 0.26
CLDND1-206ENST00000502299 Q6ZUG5 572 aa16.68■□□□□ 0.26
CLDND1-206ENST00000502299 MCF2L2Q86YR7 1114 aa16.68■□□□□ 0.26
CLDND1-206ENST00000502299 PIGSQ96S52 555 aa16.68■□□□□ 0.26
CLDND1-206ENST00000502299 TM6SF1Q9BZW5 370 aa16.68■□□□□ 0.26
CLDND1-206ENST00000502299 ZSWIM6Q9HCJ5 1215 aa16.68■□□□□ 0.26
CLDND1-206ENST00000502299 ADD3Q9UEY8 706 aaKnown RBP16.68■□□□□ 0.26
CLDND1-206ENST00000502299 PRKAG2Q9UGJ0 569 aa16.68■□□□□ 0.26
CLDND1-206ENST00000502299 EYSQ5T1H1 3165 aa16.67■□□□□ 0.26
CLDND1-206ENST00000502299 SOWAHBA6NEL2 793 aa16.67■□□□□ 0.26
CLDND1-206ENST00000502299 ZBTB43O43298 467 aa16.67■□□□□ 0.26
CLDND1-206ENST00000502299 RXRAP19793 462 aa16.67■□□□□ 0.26
CLDND1-206ENST00000502299 SLC35G1Q2M3R5 365 aa16.67■□□□□ 0.26
CLDND1-206ENST00000502299 TRIM60Q495X7 471 aa16.67■□□□□ 0.26
CLDND1-206ENST00000502299 APOA5Q6Q788 366 aa16.67■□□□□ 0.26
CLDND1-206ENST00000502299 RUFY3Q7L099 469 aa16.67■□□□□ 0.26
CLDND1-206ENST00000502299 SH3RF1Q7Z6J0 888 aa16.67■□□□□ 0.26
CLDND1-206ENST00000502299 HOMER1Q86YM7 354 aa16.67■□□□□ 0.26
CLDND1-206ENST00000502299 CCDC144CPQ8IYA2 1237 aa16.67■□□□□ 0.26
CLDND1-206ENST00000502299 SPZ1Q9BXG8 430 aa16.67■□□□□ 0.26
CLDND1-206ENST00000502299 RBM28Q9NW13 759 aaKnown RBP16.67■□□□□ 0.26
CLDND1-206ENST00000502299 BRPF3Q9ULD4 1205 aa16.67■□□□□ 0.26
CLDND1-206ENST00000502299 PCDHA1Q9Y5I3 950 aa16.67■□□□□ 0.26
CLDND1-206ENST00000502299 LOC102724159A0A0B4J2E5 919 aa16.66■□□□□ 0.26
CLDND1-206ENST00000502299 KLF18A0A0U1RQI7 1052 aa16.66■□□□□ 0.26
CLDND1-206ENST00000502299 KBTBD13C9JR72 458 aa16.66■□□□□ 0.26
CLDND1-206ENST00000502299 SNAI1O95863 264 aaPredicted RBP16.66■□□□□ 0.26
CLDND1-206ENST00000502299 MYCNP04198 464 aaPredicted RBP16.66■□□□□ 0.26
CLDND1-206ENST00000502299 CALML3P27482 149 aa16.66■□□□□ 0.26
CLDND1-206ENST00000502299 ADCYAP1R1P41586 468 aa16.66■□□□□ 0.26
CLDND1-206ENST00000502299 RCAN1P53805 252 aa16.66■□□□□ 0.26
CLDND1-206ENST00000502299 RPS6P62753 249 aaKnown RBP16.66■□□□□ 0.26
CLDND1-206ENST00000502299 PPP2R5BQ15173 497 aa16.66■□□□□ 0.26
CLDND1-206ENST00000502299 PWP2Q15269 919 aaKnown RBP16.66■□□□□ 0.26
CLDND1-206ENST00000502299 ZNF697Q5TEC3 545 aa16.66■□□□□ 0.26
CLDND1-206ENST00000502299 ARMCX2Q7L311 632 aa16.66■□□□□ 0.26
CLDND1-206ENST00000502299 MICU3Q86XE3 530 aa16.66■□□□□ 0.26
CLDND1-206ENST00000502299 RAB11FIP4Q86YS3 637 aa16.66■□□□□ 0.26
CLDND1-206ENST00000502299 SRBD1Q8N5C6 995 aaKnown RBP16.66■□□□□ 0.26
CLDND1-206ENST00000502299 SAMD3Q8N6K7 520 aa16.66■□□□□ 0.26
CLDND1-206ENST00000502299 BADQ92934 168 aa16.66■□□□□ 0.26
CLDND1-206ENST00000502299 FERMT2Q96AC1 680 aa16.66■□□□□ 0.26
CLDND1-206ENST00000502299 RRP36Q96EU6 259 aaKnown RBP16.66■□□□□ 0.26
CLDND1-206ENST00000502299 FGD4Q96M96 766 aa16.66■□□□□ 0.26
CLDND1-206ENST00000502299 CDH23Q9H251 3354 aa16.66■□□□□ 0.26
CLDND1-206ENST00000502299 ABHD16BQ9H3Z7 469 aa16.66■□□□□ 0.26
CLDND1-206ENST00000502299 PRDM5Q9NQX1 630 aaPredicted RBP16.66■□□□□ 0.26
CLDND1-206ENST00000502299 PDLIM7Q9NR12 457 aa16.66■□□□□ 0.26
CLDND1-206ENST00000502299 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.66■□□□□ 0.26
CLDND1-206ENST00000502299 MAP3K20Q9NYL2 800 aaKnown RBP16.66■□□□□ 0.26
CLDND1-206ENST00000502299 CYP46A1Q9Y6A2 500 aa16.66■□□□□ 0.26
CLDND1-206ENST00000502299 PLXNA1Q9UIW2 1896 aa16.65■□□□□ 0.26
CLDND1-206ENST00000502299 TRIM43BA6NCK2 446 aa16.65■□□□□ 0.26
CLDND1-206ENST00000502299 B4DLN1 442 aa16.65■□□□□ 0.26
CLDND1-206ENST00000502299 ZNF865P0CJ78 1059 aaPredicted RBP16.65■□□□□ 0.26
CLDND1-206ENST00000502299 MRPL12P52815 198 aaKnown RBP16.65■□□□□ 0.26
CLDND1-206ENST00000502299 ANAPC15P60006 121 aa16.65■□□□□ 0.26
CLDND1-206ENST00000502299 LRRC41Q15345 812 aa16.65■□□□□ 0.26
CLDND1-206ENST00000502299 BRF1Q92994 677 aa16.65■□□□□ 0.26
CLDND1-206ENST00000502299 TRIM43Q96BQ3 446 aaPredicted RBP16.65■□□□□ 0.26
CLDND1-206ENST00000502299 MPHOSPH6Q99547 160 aaKnown RBP16.65■□□□□ 0.26
CLDND1-206ENST00000502299 CDX2Q99626 313 aaPredicted RBP16.65■□□□□ 0.26
CLDND1-206ENST00000502299 AGXT2Q9BYV1 514 aa16.65■□□□□ 0.26
CLDND1-206ENST00000502299 SEC63Q9UGP8 760 aaKnown RBP16.65■□□□□ 0.26
CLDND1-206ENST00000502299 LTBP2Q14767 1821 aa16.64■□□□□ 0.25
CLDND1-206ENST00000502299 SMCHD1A6NHR9 2005 aa16.64■□□□□ 0.25
CLDND1-206ENST00000502299 CCDC196A0A1B0GTZ2 297 aa16.64■□□□□ 0.25
CLDND1-206ENST00000502299 PPP1R11O60927 126 aaPredicted RBP16.64■□□□□ 0.25
CLDND1-206ENST00000502299 PLEKHA8P1O95397 391 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms