RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 TTYH3Q9C0H2 523 aa11.04□□□□□ -0.64
CLIP1-204ENST00000501271 MTMR4Q9NYA4 1195 aa11.04□□□□□ -0.64
CLIP1-204ENST00000501271 CAPN11Q9UMQ6 739 aa11.04□□□□□ -0.64
CLIP1-204ENST00000501271 LUC7L2Q9Y383 392 aaKnown RBP11.04□□□□□ -0.64
CLIP1-204ENST00000501271 EPN1Q9Y6I3 576 aaPredicted RBP11.04□□□□□ -0.64
CLIP1-204ENST00000501271 MYH7BA7E2Y1 1941 aa11.04□□□□□ -0.64
CLIP1-204ENST00000501271 ANKRD31Q8N7Z5 1873 aa11.04□□□□□ -0.64
CLIP1-204ENST00000501271 RASSF10A6NK89 507 aa11.04□□□□□ -0.64
CLIP1-204ENST00000501271 SLC37A4O43826 429 aa11.04□□□□□ -0.64
CLIP1-204ENST00000501271 BBOX1O75936 387 aa11.04□□□□□ -0.64
CLIP1-204ENST00000501271 KIF20AO95235 890 aa11.04□□□□□ -0.64
CLIP1-204ENST00000501271 AKR1B1P15121 316 aa11.04□□□□□ -0.64
CLIP1-204ENST00000501271 TXKP42681 527 aa11.04□□□□□ -0.64
CLIP1-204ENST00000501271 DNM2P50570 870 aa11.04□□□□□ -0.64
CLIP1-204ENST00000501271 GTF2IP78347 998 aa11.04□□□□□ -0.64
CLIP1-204ENST00000501271 GABPAQ06546 454 aa11.04□□□□□ -0.64
CLIP1-204ENST00000501271 CEP112Q8N8E3 955 aa11.04□□□□□ -0.64
CLIP1-204ENST00000501271 NOC3LQ8WTT2 800 aaKnown RBP11.04□□□□□ -0.64
CLIP1-204ENST00000501271 GJD4Q96KN9 370 aaPredicted RBP11.04□□□□□ -0.64
CLIP1-204ENST00000501271 CNOT6LQ96LI5 555 aaKnown RBP11.04□□□□□ -0.64
CLIP1-204ENST00000501271 MTMR9Q96QG7 549 aa11.04□□□□□ -0.64
CLIP1-204ENST00000501271 ANKZF1Q9H8Y5 726 aa11.04□□□□□ -0.64
CLIP1-204ENST00000501271 AGPAT5Q9NUQ2 364 aa11.04□□□□□ -0.64
CLIP1-204ENST00000501271 TDP2O95551 362 aa11.03□□□□□ -0.64
CLIP1-204ENST00000501271 HOXA10P31260 410 aaPredicted RBP11.03□□□□□ -0.64
CLIP1-204ENST00000501271 GRB10Q13322 594 aa11.03□□□□□ -0.64
CLIP1-204ENST00000501271 DDX4Q9NQI0 724 aaKnown RBP11.03□□□□□ -0.64
CLIP1-204ENST00000501271 BLOC1S4Q9NUP1 217 aa11.03□□□□□ -0.64
CLIP1-204ENST00000501271 MYO1AQ9UBC5 1043 aa11.03□□□□□ -0.64
CLIP1-204ENST00000501271 TFR2Q9UP52 801 aa11.03□□□□□ -0.64
CLIP1-204ENST00000501271 ARFGEF1Q9Y6D6 1849 aa11.03□□□□□ -0.64
CLIP1-204ENST00000501271 IGKV6D-41A0A0C4DH26 115 aa11.03□□□□□ -0.64
CLIP1-204ENST00000501271 BICDL2A1A5D9 508 aa11.03□□□□□ -0.64
CLIP1-204ENST00000501271 F8W031 263 aaPredicted RBP11.03□□□□□ -0.64
CLIP1-204ENST00000501271 ATP8B1O43520 1251 aa11.03□□□□□ -0.64
CLIP1-204ENST00000501271 SNHG28P0DPA3 235 aa11.03□□□□□ -0.64
CLIP1-204ENST00000501271 ADCY7P51828 1080 aa11.03□□□□□ -0.64
CLIP1-204ENST00000501271 HERVK_113P62684 666 aa11.03□□□□□ -0.64
CLIP1-204ENST00000501271 AMPD2Q01433 879 aa11.03□□□□□ -0.64
CLIP1-204ENST00000501271 ORC2Q13416 577 aaPredicted RBP11.03□□□□□ -0.64
CLIP1-204ENST00000501271 CALCRLQ16602 461 aa11.03□□□□□ -0.64
CLIP1-204ENST00000501271 MIIPQ5JXC2 388 aa11.03□□□□□ -0.64
CLIP1-204ENST00000501271 DPP8Q6V1X1 898 aaPredicted RBP11.03□□□□□ -0.64
CLIP1-204ENST00000501271 CCDC47Q96A33 483 aaKnown RBP11.03□□□□□ -0.64
CLIP1-204ENST00000501271 PNMA5Q96PV4 448 aa11.03□□□□□ -0.64
CLIP1-204ENST00000501271 ARFGAP3Q9NP61 516 aa11.03□□□□□ -0.64
CLIP1-204ENST00000501271 GREB1LQ9C091 1923 aaPredicted RBP11.03□□□□□ -0.64
CLIP1-204ENST00000501271 POTEMA6NI47 508 aa11.02□□□□□ -0.65
CLIP1-204ENST00000501271 hCG_1984214I3L0E3 225 aa11.02□□□□□ -0.65
CLIP1-204ENST00000501271 RIMBP2O15034 1052 aa11.02□□□□□ -0.65
CLIP1-204ENST00000501271 MCM6Q14566 821 aa11.02□□□□□ -0.65
CLIP1-204ENST00000501271 MEA1Q16626 185 aa11.02□□□□□ -0.65
CLIP1-204ENST00000501271 ASPRV1Q53RT3 343 aa11.02□□□□□ -0.65
CLIP1-204ENST00000501271 CERS5Q8N5B7 392 aa11.02□□□□□ -0.65
CLIP1-204ENST00000501271 ZNF713Q8N859 430 aaPredicted RBP11.02□□□□□ -0.65
CLIP1-204ENST00000501271 CALML4Q96GE6 196 aa11.02□□□□□ -0.65
CLIP1-204ENST00000501271 PNKPQ96T60 521 aa11.02□□□□□ -0.65
CLIP1-204ENST00000501271 UBXN6Q9BZV1 441 aa11.02□□□□□ -0.65
CLIP1-204ENST00000501271 SEMA6BQ9H3T3 888 aa11.02□□□□□ -0.65
CLIP1-204ENST00000501271 SLC39A2Q9NP94 309 aa11.02□□□□□ -0.65
CLIP1-204ENST00000501271 GPCPD1Q9NPB8 672 aa11.02□□□□□ -0.65
CLIP1-204ENST00000501271 LRWD1Q9UFC0 647 aa11.02□□□□□ -0.65
CLIP1-204ENST00000501271 GUCA1BQ9UMX6 200 aa11.02□□□□□ -0.65
CLIP1-204ENST00000501271 CCDC151A5D8V7 595 aa11.01□□□□□ -0.65
CLIP1-204ENST00000501271 MYMKA6NI61 221 aa11.01□□□□□ -0.65
CLIP1-204ENST00000501271 POLRMTO00411 1230 aaKnown RBP11.01□□□□□ -0.65
CLIP1-204ENST00000501271 PPP1R11O60927 126 aaPredicted RBP11.01□□□□□ -0.65
CLIP1-204ENST00000501271 TRIM21P19474 475 aaKnown RBP11.01□□□□□ -0.65
CLIP1-204ENST00000501271 MTIF2P46199 727 aaKnown RBP11.01□□□□□ -0.65
CLIP1-204ENST00000501271 FXR2P51116 673 aaKnown RBP eCLIP11.01□□□□□ -0.65
CLIP1-204ENST00000501271 AMPD3Q01432 767 aa11.01□□□□□ -0.65
CLIP1-204ENST00000501271 TBC1D8BQ0IIM8 1120 aa11.01□□□□□ -0.65
CLIP1-204ENST00000501271 TUBB2AQ13885 445 aa11.01□□□□□ -0.65
CLIP1-204ENST00000501271 CNNM4Q6P4Q7 775 aa11.01□□□□□ -0.65
CLIP1-204ENST00000501271 CRAMP1Q96RY5 1269 aa11.01□□□□□ -0.65
CLIP1-204ENST00000501271 TUBB2BQ9BVA1 445 aa11.01□□□□□ -0.65
CLIP1-204ENST00000501271 FUT8Q9BYC5 575 aa11.01□□□□□ -0.65
CLIP1-204ENST00000501271 PPEF1O14829 653 aaPredicted RBP11.01□□□□□ -0.65
CLIP1-204ENST00000501271 UBE2SQ16763 222 aa11.01□□□□□ -0.65
CLIP1-204ENST00000501271 LONRF2Q1L5Z9 754 aa11.01□□□□□ -0.65
CLIP1-204ENST00000501271 COBLL1Q53SF7 1204 aa11.01□□□□□ -0.65
CLIP1-204ENST00000501271 SV2BQ7L1I2 683 aa11.01□□□□□ -0.65
CLIP1-204ENST00000501271 FAM114A1Q8IWE2 563 aa11.01□□□□□ -0.65
CLIP1-204ENST00000501271 ZSCAN29Q8IWY8 852 aaPredicted RBP11.01□□□□□ -0.65
CLIP1-204ENST00000501271 MSANTD4Q8NCY6 345 aa11.01□□□□□ -0.65
CLIP1-204ENST00000501271 NUDT12Q9BQG2 462 aa11.01□□□□□ -0.65
CLIP1-204ENST00000501271 NOC4LQ9BVI4 516 aaKnown RBP11.01□□□□□ -0.65
CLIP1-204ENST00000501271 MXD3Q9BW11 206 aa11.01□□□□□ -0.65
CLIP1-204ENST00000501271 TNNI2P48788 182 aa11□□□□□ -0.65
CLIP1-204ENST00000501271 BRD3Q15059 726 aa11□□□□□ -0.65
CLIP1-204ENST00000501271 WHAMMP3Q1A5X7 153 aa11□□□□□ -0.65
CLIP1-204ENST00000501271 NCAPH2Q6IBW4 605 aa11□□□□□ -0.65
CLIP1-204ENST00000501271 CENPPQ6IPU0 288 aa11□□□□□ -0.65
CLIP1-204ENST00000501271 DYMQ7RTS9 669 aa11□□□□□ -0.65
CLIP1-204ENST00000501271 KCNK18Q7Z418 384 aa11□□□□□ -0.65
CLIP1-204ENST00000501271 SEPT12Q8IYM1 358 aa11□□□□□ -0.65
CLIP1-204ENST00000501271 LARP4BQ92615 738 aaKnown RBP11□□□□□ -0.65
CLIP1-204ENST00000501271 HAUS4Q9H6D7 363 aa11□□□□□ -0.65
CLIP1-204ENST00000501271 JMJD4Q9H9V9 463 aa11□□□□□ -0.65
CLIP1-204ENST00000501271 STK17AQ9UEE5 414 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms