RNA–Protein interactions for RNA: ENST00000498803.5

SPIRE1-211, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 4

Gene SPIRE1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-211ENST00000498803 CUEDC2Q9H467 287 aa9.57□□□□□ -0.88
SPIRE1-211ENST00000498803 RPAP3Q9H6T3 665 aaPredicted RBP9.57□□□□□ -0.88
SPIRE1-211ENST00000498803 MAGEF1Q9HAY2 307 aa9.57□□□□□ -0.88
SPIRE1-211ENST00000498803 SLC38A10Q9HBR0 1119 aa9.57□□□□□ -0.88
SPIRE1-211ENST00000498803 TMEM260Q9NX78 707 aa9.57□□□□□ -0.88
SPIRE1-211ENST00000498803 HOXC10Q9NYD6 342 aa9.57□□□□□ -0.88
SPIRE1-211ENST00000498803 KIAA1468Q9P260 1216 aa9.57□□□□□ -0.88
SPIRE1-211ENST00000498803 CCPG1Q9ULG6 757 aa9.57□□□□□ -0.88
SPIRE1-211ENST00000498803 AFG3L2Q9Y4W6 797 aa9.57□□□□□ -0.88
SPIRE1-211ENST00000498803 ADM5C9JUS6 153 aa9.56□□□□□ -0.88
SPIRE1-211ENST00000498803 TBX3O15119 743 aa9.56□□□□□ -0.88
SPIRE1-211ENST00000498803 POLR2DO15514 142 aaKnown RBP9.56□□□□□ -0.88
SPIRE1-211ENST00000498803 MYL1P05976 194 aa9.56□□□□□ -0.88
SPIRE1-211ENST00000498803 CYP3A4P08684 503 aa9.56□□□□□ -0.88
SPIRE1-211ENST00000498803 SLFN14P0C7P3 912 aa9.56□□□□□ -0.88
SPIRE1-211ENST00000498803 SREBF1P36956 1147 aa9.56□□□□□ -0.88
SPIRE1-211ENST00000498803 FXR2P51116 673 aaKnown RBP eCLIP9.56□□□□□ -0.88
SPIRE1-211ENST00000498803 FKBP1BP68106 108 aa9.56□□□□□ -0.88
SPIRE1-211ENST00000498803 GHRHRQ02643 423 aa9.56□□□□□ -0.88
SPIRE1-211ENST00000498803 SEMA3FQ13275 785 aa9.56□□□□□ -0.88
SPIRE1-211ENST00000498803 COG2Q14746 738 aa9.56□□□□□ -0.88
SPIRE1-211ENST00000498803 UBE2SQ16763 222 aa9.56□□□□□ -0.88
SPIRE1-211ENST00000498803 TKFCQ3LXA3 575 aa9.56□□□□□ -0.88
SPIRE1-211ENST00000498803 EAPPQ56P03 285 aaPredicted RBP9.56□□□□□ -0.88
SPIRE1-211ENST00000498803 CCDC174Q6PII3 467 aa9.56□□□□□ -0.88
SPIRE1-211ENST00000498803 USP17L6PQ6QN14 398 aa9.56□□□□□ -0.88
SPIRE1-211ENST00000498803 CCDC84Q86UT8 332 aaPredicted RBP9.56□□□□□ -0.88
SPIRE1-211ENST00000498803 CKAP2LQ8IYA6 745 aa9.56□□□□□ -0.88
SPIRE1-211ENST00000498803 SLFN12Q8IYM2 578 aa9.56□□□□□ -0.88
SPIRE1-211ENST00000498803 FAM200AQ8TCP9 573 aa9.56□□□□□ -0.88
SPIRE1-211ENST00000498803 SYMPKQ92797 1274 aaKnown RBP9.56□□□□□ -0.88
SPIRE1-211ENST00000498803 CCSER1Q9C0I3 900 aa9.56□□□□□ -0.88
SPIRE1-211ENST00000498803 DDX25Q9UHL0 483 aaKnown RBP9.56□□□□□ -0.88
SPIRE1-211ENST00000498803 SCN4AP35499 1836 aa9.56□□□□□ -0.88
SPIRE1-211ENST00000498803 DOCK1Q14185 1865 aa9.55□□□□□ -0.88
SPIRE1-211ENST00000498803 SSC5DA1L4H1 1573 aa9.55□□□□□ -0.88
SPIRE1-211ENST00000498803 WNT7AO00755 349 aa9.55□□□□□ -0.88
SPIRE1-211ENST00000498803 ATP2A1O14983 1001 aa9.55□□□□□ -0.88
SPIRE1-211ENST00000498803 ADAMTS3O15072 1205 aa9.55□□□□□ -0.88
SPIRE1-211ENST00000498803 XRCC6P12956 609 aaKnown RBP eCLIP9.55□□□□□ -0.88
SPIRE1-211ENST00000498803 DSG3P32926 999 aa9.55□□□□□ -0.88
SPIRE1-211ENST00000498803 CIITAP33076 1130 aa9.55□□□□□ -0.88
SPIRE1-211ENST00000498803 HMGCS2P54868 508 aa9.55□□□□□ -0.88
SPIRE1-211ENST00000498803 ARHGAP4P98171 946 aa9.55□□□□□ -0.88
SPIRE1-211ENST00000498803 PABPC4Q13310 644 aaKnown RBP eCLIP9.55□□□□□ -0.88
SPIRE1-211ENST00000498803 VGLL4Q14135 290 aa9.55□□□□□ -0.88
SPIRE1-211ENST00000498803 TTLL12Q14166 644 aaPredicted RBP9.55□□□□□ -0.88
SPIRE1-211ENST00000498803 LONRF3Q496Y0 759 aa9.55□□□□□ -0.88
SPIRE1-211ENST00000498803 CT47A1Q5JQC4 288 aaPredicted RBP9.55□□□□□ -0.88
SPIRE1-211ENST00000498803 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.55□□□□□ -0.88
SPIRE1-211ENST00000498803 MB21D1Q8N884 522 aa9.55□□□□□ -0.88
SPIRE1-211ENST00000498803 TRIML1Q8N9V2 468 aa9.55□□□□□ -0.88
SPIRE1-211ENST00000498803 PROCA1Q8NCQ7 364 aaPredicted RBP9.55□□□□□ -0.88
SPIRE1-211ENST00000498803 RASSF8Q8NHQ8 419 aa9.55□□□□□ -0.88
SPIRE1-211ENST00000498803 CALML4Q96GE6 196 aa9.55□□□□□ -0.88
SPIRE1-211ENST00000498803 MBOAT7Q96N66 472 aa9.55□□□□□ -0.88
SPIRE1-211ENST00000498803 MTMR9Q96QG7 549 aa9.55□□□□□ -0.88
SPIRE1-211ENST00000498803 GTPBP4Q9BZE4 634 aaKnown RBP9.55□□□□□ -0.88
SPIRE1-211ENST00000498803 RBSNQ9H1K0 784 aa9.55□□□□□ -0.88
SPIRE1-211ENST00000498803 FBXO28Q9NVF7 368 aa9.55□□□□□ -0.88
SPIRE1-211ENST00000498803 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.55□□□□□ -0.88
SPIRE1-211ENST00000498803 CLEC11AQ9Y240 323 aa9.55□□□□□ -0.88
SPIRE1-211ENST00000498803 SNCAIPQ9Y6H5 919 aa9.55□□□□□ -0.88
SPIRE1-211ENST00000498803 SPDYE5A6NIY4 337 aa9.54□□□□□ -0.88
SPIRE1-211ENST00000498803 VWA5AO00534 786 aa9.54□□□□□ -0.88
SPIRE1-211ENST00000498803 CFBP00751 764 aa9.54□□□□□ -0.88
SPIRE1-211ENST00000498803 ZNF76P36508 570 aa9.54□□□□□ -0.88
SPIRE1-211ENST00000498803 SNAP25P60880 206 aa9.54□□□□□ -0.88
SPIRE1-211ENST00000498803 GRIN1Q05586 938 aa9.54□□□□□ -0.88
SPIRE1-211ENST00000498803 PPIL2Q13356 520 aa9.54□□□□□ -0.88
SPIRE1-211ENST00000498803 POSTNQ15063 836 aa9.54□□□□□ -0.88
SPIRE1-211ENST00000498803 Q4G0T1 1027 aa9.54□□□□□ -0.88
SPIRE1-211ENST00000498803 SPECC1Q5M775 1068 aa9.54□□□□□ -0.88
SPIRE1-211ENST00000498803 RRAGBQ5VZM2 374 aa9.54□□□□□ -0.88
SPIRE1-211ENST00000498803 XRRA1Q6P2D8 792 aa9.54□□□□□ -0.88
SPIRE1-211ENST00000498803 CATSPERGQ6ZRH7 1159 aa9.54□□□□□ -0.88
SPIRE1-211ENST00000498803 FASTKD5Q7L8L6 764 aaKnown RBP9.54□□□□□ -0.88
SPIRE1-211ENST00000498803 KCTD17Q8N5Z5 321 aa9.54□□□□□ -0.88
SPIRE1-211ENST00000498803 IGSF22Q8N9C0 903 aa9.54□□□□□ -0.88
SPIRE1-211ENST00000498803 CRYGNQ8WXF5 182 aa9.54□□□□□ -0.88
SPIRE1-211ENST00000498803 EPSTI1Q96J88 318 aa9.54□□□□□ -0.88
SPIRE1-211ENST00000498803 FAM20AQ96MK3 541 aa9.54□□□□□ -0.88
SPIRE1-211ENST00000498803 LRRC27Q9C0I9 530 aa9.54□□□□□ -0.88
SPIRE1-211ENST00000498803 TMEM60Q9H2L4 133 aa9.54□□□□□ -0.88
SPIRE1-211ENST00000498803 DACH1Q9UI36 760 aa9.54□□□□□ -0.88
SPIRE1-211ENST00000498803 TUBE1Q9UJT0 475 aa9.54□□□□□ -0.88
SPIRE1-211ENST00000498803 ADAMTS5Q9UNA0 930 aa9.54□□□□□ -0.88
SPIRE1-211ENST00000498803 ATAD5Q96QE3 1844 aa9.54□□□□□ -0.88
SPIRE1-211ENST00000498803 GOLGA6L19H0YKK7 550 aa9.53□□□□□ -0.88
SPIRE1-211ENST00000498803 OPLAHO14841 1288 aa9.53□□□□□ -0.88
SPIRE1-211ENST00000498803 ACTN4O43707 911 aaKnown RBP9.53□□□□□ -0.88
SPIRE1-211ENST00000498803 TDP2O95551 362 aa9.53□□□□□ -0.88
SPIRE1-211ENST00000498803 HOXA7P31268 230 aaPredicted RBP9.53□□□□□ -0.88
SPIRE1-211ENST00000498803 COPB2P35606 906 aa9.53□□□□□ -0.88
SPIRE1-211ENST00000498803 STAT6P42226 847 aa9.53□□□□□ -0.88
SPIRE1-211ENST00000498803 ZNF165P49910 485 aa9.53□□□□□ -0.88
SPIRE1-211ENST00000498803 HSD17B4P51659 736 aa9.53□□□□□ -0.88
SPIRE1-211ENST00000498803 NLRP12P59046 1061 aa9.53□□□□□ -0.88
SPIRE1-211ENST00000498803 TPM4P67936 248 aa9.53□□□□□ -0.88
SPIRE1-211ENST00000498803 SETQ01105 290 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms