RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 CALML3P27482 149 aa18.64■□□□□ 0.57
LMNA-217ENST00000498722 RTN1Q16799 776 aa18.64■□□□□ 0.57
LMNA-217ENST00000498722 MAP3K21Q5TCX8 1036 aa18.64■□□□□ 0.57
LMNA-217ENST00000498722 RNF207Q6ZRF8 634 aa18.64■□□□□ 0.57
LMNA-217ENST00000498722 TNPO1Q92973 898 aaKnown RBP18.64■□□□□ 0.57
LMNA-217ENST00000498722 RRP36Q96EU6 259 aaKnown RBP18.64■□□□□ 0.57
LMNA-217ENST00000498722 ZNF274Q96GC6 653 aaPredicted RBP18.64■□□□□ 0.57
LMNA-217ENST00000498722 LZTS2Q9BRK4 669 aa18.64■□□□□ 0.57
LMNA-217ENST00000498722 TINF2Q9BSI4 451 aa18.64■□□□□ 0.57
LMNA-217ENST00000498722 RIOX1Q9H6W3 641 aa18.64■□□□□ 0.57
LMNA-217ENST00000498722 CYP39A1Q9NYL5 469 aa18.64■□□□□ 0.57
LMNA-217ENST00000498722 CYTH3O43739 400 aa18.63■□□□□ 0.57
LMNA-217ENST00000498722 TFRCP02786 760 aaKnown RBP18.63■□□□□ 0.57
LMNA-217ENST00000498722 BAATQ14032 418 aaPredicted RBP18.63■□□□□ 0.57
LMNA-217ENST00000498722 SLC35G1Q2M3R5 365 aa18.63■□□□□ 0.57
LMNA-217ENST00000498722 PRAMEF19Q5SWL8 479 aa18.63■□□□□ 0.57
LMNA-217ENST00000498722 U2AF1L4Q8WU68 220 aaKnown RBP18.63■□□□□ 0.57
LMNA-217ENST00000498722 CLEC4DQ8WXI8 215 aa18.63■□□□□ 0.57
LMNA-217ENST00000498722 SPZ1Q9BXG8 430 aa18.63■□□□□ 0.57
LMNA-217ENST00000498722 PAK6Q9NQU5 681 aaPredicted RBP18.63■□□□□ 0.57
LMNA-217ENST00000498722 RBM28Q9NW13 759 aaKnown RBP18.63■□□□□ 0.57
LMNA-217ENST00000498722 CNPY2Q9Y2B0 182 aa18.63■□□□□ 0.57
LMNA-217ENST00000498722 MRPL11Q9Y3B7 192 aaKnown RBP18.63■□□□□ 0.57
LMNA-217ENST00000498722 PCDHA1Q9Y5I3 950 aa18.63■□□□□ 0.57
LMNA-217ENST00000498722 LRRC37A2A6NM11 1700 aa18.63■□□□□ 0.57
LMNA-217ENST00000498722 BRCA2P51587 3418 aa18.62■□□□□ 0.57
LMNA-217ENST00000498722 PNMA6FA0A0J9YX94 578 aa18.62■□□□□ 0.57
LMNA-217ENST00000498722 PFKFB2O60825 505 aa18.62■□□□□ 0.57
LMNA-217ENST00000498722 PTMSP20962 102 aa18.62■□□□□ 0.57
LMNA-217ENST00000498722 METAP2P50579 478 aaKnown RBP eCLIP18.62■□□□□ 0.57
LMNA-217ENST00000498722 EVCP57679 992 aa18.62■□□□□ 0.57
LMNA-217ENST00000498722 TRAF1Q13077 416 aa18.62■□□□□ 0.57
LMNA-217ENST00000498722 SLC30A10Q6XR72 485 aa18.62■□□□□ 0.57
LMNA-217ENST00000498722 SRBD1Q8N5C6 995 aaKnown RBP18.62■□□□□ 0.57
LMNA-217ENST00000498722 FAM133AQ8N9E0 248 aa18.62■□□□□ 0.57
LMNA-217ENST00000498722 GTF3C6Q969F1 213 aa18.62■□□□□ 0.57
LMNA-217ENST00000498722 MTMR8Q96EF0 704 aa18.62■□□□□ 0.57
LMNA-217ENST00000498722 KIAA1217Q5T5P2 1943 aa18.61■□□□□ 0.57
LMNA-217ENST00000498722 PPP1R11O60927 126 aaPredicted RBP18.61■□□□□ 0.57
LMNA-217ENST00000498722 SGPL1O95470 568 aa18.61■□□□□ 0.57
LMNA-217ENST00000498722 CYBAP13498 195 aa18.61■□□□□ 0.57
LMNA-217ENST00000498722 GJA8P48165 433 aa18.61■□□□□ 0.57
LMNA-217ENST00000498722 CLEC17AQ6ZS10 378 aa18.61■□□□□ 0.57
LMNA-217ENST00000498722 TMTC3Q6ZXV5 915 aa18.61■□□□□ 0.57
LMNA-217ENST00000498722 ZNF467Q7Z7K2 595 aaPredicted RBP18.61■□□□□ 0.57
LMNA-217ENST00000498722 MCF2L2Q86YR7 1114 aa18.61■□□□□ 0.57
LMNA-217ENST00000498722 NECAB1Q8N987 351 aa18.61■□□□□ 0.57
LMNA-217ENST00000498722 PURBQ96QR8 312 aaKnown RBP18.61■□□□□ 0.57
LMNA-217ENST00000498722 LLPHQ9BRT6 129 aaKnown RBP18.61■□□□□ 0.57
LMNA-217ENST00000498722 SYNGAP1Q96PV0 1343 aa18.6■□□□□ 0.57
LMNA-217ENST00000498722 DDX11L8A8MPP1 907 aa18.6■□□□□ 0.57
LMNA-217ENST00000498722 CFBP00751 764 aa18.6■□□□□ 0.57
LMNA-217ENST00000498722 SMARCA1P28370 1054 aa18.6■□□□□ 0.57
LMNA-217ENST00000498722 GJB2P29033 226 aa18.6■□□□□ 0.57
LMNA-217ENST00000498722 RPS6P62753 249 aaKnown RBP18.6■□□□□ 0.57
LMNA-217ENST00000498722 ST3GAL1Q11201 340 aa18.6■□□□□ 0.57
LMNA-217ENST00000498722 ARMCX2Q7L311 632 aa18.6■□□□□ 0.57
LMNA-217ENST00000498722 MSL3Q8N5Y2 521 aaKnown RBP18.6■□□□□ 0.57
LMNA-217ENST00000498722 TRPV1Q8NER1 839 aa18.6■□□□□ 0.57
LMNA-217ENST00000498722 ADD3Q9UEY8 706 aaKnown RBP18.6■□□□□ 0.57
LMNA-217ENST00000498722 ZHX1Q9UKY1 873 aaPredicted RBP18.6■□□□□ 0.57
LMNA-217ENST00000498722 hCG_1642624A0A1W2PR95 340 aa18.59■□□□□ 0.57
LMNA-217ENST00000498722 SOWAHBA6NEL2 793 aa18.59■□□□□ 0.57
LMNA-217ENST00000498722 ASB14A6NK59 587 aa18.59■□□□□ 0.57
LMNA-217ENST00000498722 BRD1O95696 1058 aa18.59■□□□□ 0.57
LMNA-217ENST00000498722 MCM4P33991 863 aa18.59■□□□□ 0.57
LMNA-217ENST00000498722 STK3Q13188 491 aa18.59■□□□□ 0.57
LMNA-217ENST00000498722 ANO1Q5XXA6 986 aa18.59■□□□□ 0.57
LMNA-217ENST00000498722 FGD4Q96M96 766 aa18.59■□□□□ 0.57
LMNA-217ENST00000498722 CCDC196A0A1B0GTZ2 297 aa18.58■□□□□ 0.57
LMNA-217ENST00000498722 GOLGA6L22H0YM25 854 aa18.58■□□□□ 0.57
LMNA-217ENST00000498722 IGHA2P01877 340 aa18.58■□□□□ 0.57
LMNA-217ENST00000498722 MYCNP04198 464 aaPredicted RBP18.58■□□□□ 0.57
LMNA-217ENST00000498722 PDCP20941 246 aa18.58■□□□□ 0.57
LMNA-217ENST00000498722 RCAN1P53805 252 aa18.58■□□□□ 0.57
LMNA-217ENST00000498722 MAMDC4Q6UXC1 1216 aa18.58■□□□□ 0.57
LMNA-217ENST00000498722 TBC1D5Q92609 795 aa18.58■□□□□ 0.57
LMNA-217ENST00000498722 SHISA4Q96DD7 197 aa18.58■□□□□ 0.57
LMNA-217ENST00000498722 MPHOSPH6Q99547 160 aaKnown RBP18.58■□□□□ 0.57
LMNA-217ENST00000498722 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.58■□□□□ 0.57
LMNA-217ENST00000498722 DDX20Q9UHI6 824 aaKnown RBP18.58■□□□□ 0.57
LMNA-217ENST00000498722 KIF3AQ9Y496 699 aa18.58■□□□□ 0.57
LMNA-217ENST00000498722 MYH7BA7E2Y1 1941 aa18.57■□□□□ 0.56
LMNA-217ENST00000498722 SEPT4O43236 478 aa18.57■□□□□ 0.56
LMNA-217ENST00000498722 MSCO60682 206 aa18.57■□□□□ 0.56
LMNA-217ENST00000498722 SNAI1O95863 264 aaPredicted RBP18.57■□□□□ 0.56
LMNA-217ENST00000498722 PDIA3P30101 505 aaKnown RBP18.57■□□□□ 0.56
LMNA-217ENST00000498722 CDC27P30260 824 aa18.57■□□□□ 0.56
LMNA-217ENST00000498722 ALDH5A1P51649 535 aaPredicted RBP18.57■□□□□ 0.56
LMNA-217ENST00000498722 MLLT1Q03111 559 aaPredicted RBP18.57■□□□□ 0.56
LMNA-217ENST00000498722 EEPD1Q7L9B9 569 aa18.57■□□□□ 0.56
LMNA-217ENST00000498722 NRBP1Q9UHY1 535 aa18.57■□□□□ 0.56
LMNA-217ENST00000498722 DDX49Q9Y6V7 483 aaKnown RBP18.57■□□□□ 0.56
LMNA-217ENST00000498722 ASTN1O14525 1302 aa18.57■□□□□ 0.56
LMNA-217ENST00000498722 CNTNAP5Q8WYK1 1306 aa18.57■□□□□ 0.56
LMNA-217ENST00000498722 STX6O43752 255 aa18.56■□□□□ 0.56
LMNA-217ENST00000498722 FARP2O94887 1054 aaPredicted RBP18.56■□□□□ 0.56
LMNA-217ENST00000498722 HOXA13P31271 388 aaPredicted RBP18.56■□□□□ 0.56
LMNA-217ENST00000498722 CCT2P78371 535 aaKnown RBP18.56■□□□□ 0.56
LMNA-217ENST00000498722 HMGN5P82970 282 aaKnown RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms