RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 VWCEQ96DN2 955 aa16.55■□□□□ 0.24
CCDC58-207ENST00000498466 NACAP1Q9BZK3 213 aa16.55■□□□□ 0.24
CCDC58-207ENST00000498466 VTA1Q9NP79 307 aa16.55■□□□□ 0.24
CCDC58-207ENST00000498466 TRMT13Q9NUP7 481 aaKnown RBP16.55■□□□□ 0.24
CCDC58-207ENST00000498466 MTCH2Q9Y6C9 303 aa16.55■□□□□ 0.24
CCDC58-207ENST00000498466 MYO9BQ13459 2157 aa16.54■□□□□ 0.24
CCDC58-207ENST00000498466 TNKSO95271 1327 aa16.54■□□□□ 0.24
CCDC58-207ENST00000498466 SLC3A2P08195 630 aaKnown RBP16.54■□□□□ 0.24
CCDC58-207ENST00000498466 ACTN1P12814 892 aa16.54■□□□□ 0.24
CCDC58-207ENST00000498466 GPATCH3Q96I76 525 aa16.54■□□□□ 0.24
CCDC58-207ENST00000498466 PURBQ96QR8 312 aaKnown RBP16.54■□□□□ 0.24
CCDC58-207ENST00000498466 POLR3EQ9NVU0 708 aa16.54■□□□□ 0.24
CCDC58-207ENST00000498466 CCPG1Q9ULG6 757 aa16.54■□□□□ 0.24
CCDC58-207ENST00000498466 STX8Q9UNK0 236 aa16.54■□□□□ 0.24
CCDC58-207ENST00000498466 PLA2G6O60733 806 aa16.53■□□□□ 0.24
CCDC58-207ENST00000498466 MYL3P08590 195 aa16.53■□□□□ 0.24
CCDC58-207ENST00000498466 DUSP28Q4G0W2 176 aa16.53■□□□□ 0.24
CCDC58-207ENST00000498466 TSHZ3Q63HK5 1081 aa16.53■□□□□ 0.24
CCDC58-207ENST00000498466 GPHNQ9NQX3 736 aaPredicted RBP16.53■□□□□ 0.24
CCDC58-207ENST00000498466 PRR12Q9ULL5 1215 aa16.53■□□□□ 0.24
CCDC58-207ENST00000498466 LRRC37A2A6NM11 1700 aa16.53■□□□□ 0.24
CCDC58-207ENST00000498466 POU3F3P20264 500 aaPredicted RBP16.52■□□□□ 0.24
CCDC58-207ENST00000498466 CPT1AP50416 773 aa16.52■□□□□ 0.24
CCDC58-207ENST00000498466 LRRFIP1Q32MZ4 808 aaKnown RBP16.52■□□□□ 0.24
CCDC58-207ENST00000498466 FAM47CQ5HY64 1035 aa16.52■□□□□ 0.24
CCDC58-207ENST00000498466 PPP4R3BQ5MIZ7 849 aa16.52■□□□□ 0.24
CCDC58-207ENST00000498466 RCSD1Q6JBY9 416 aa16.52■□□□□ 0.24
CCDC58-207ENST00000498466 ARNTL2Q8WYA1 636 aa16.52■□□□□ 0.24
CCDC58-207ENST00000498466 SLC9A7Q96T83 725 aa16.52■□□□□ 0.24
CCDC58-207ENST00000498466 WDR11Q9BZH6 1224 aa16.52■□□□□ 0.24
CCDC58-207ENST00000498466 NAPBQ9H115 298 aa16.52■□□□□ 0.24
CCDC58-207ENST00000498466 MTMR7Q9Y216 660 aa16.52■□□□□ 0.24
CCDC58-207ENST00000498466 EPOPA6NHQ4 379 aa16.51■□□□□ 0.23
CCDC58-207ENST00000498466 TSPY2A6NKD2 308 aa16.51■□□□□ 0.23
CCDC58-207ENST00000498466 PURAQ00577 322 aaKnown RBP16.51■□□□□ 0.23
CCDC58-207ENST00000498466 PPARAQ07869 468 aa16.51■□□□□ 0.23
CCDC58-207ENST00000498466 KRT40Q6A162 431 aa16.51■□□□□ 0.23
CCDC58-207ENST00000498466 OR6J1Q8NGC5 347 aa16.51■□□□□ 0.23
CCDC58-207ENST00000498466 MORC4Q8TE76 937 aa16.51■□□□□ 0.23
CCDC58-207ENST00000498466 MTG1Q9BT17 334 aaPredicted RBP16.51■□□□□ 0.23
CCDC58-207ENST00000498466 FTOQ9C0B1 505 aaKnown RBP eCLIP16.51■□□□□ 0.23
CCDC58-207ENST00000498466 ADD3Q9UEY8 706 aaKnown RBP16.51■□□□□ 0.23
CCDC58-207ENST00000498466 COG5Q9UP83 839 aa16.51■□□□□ 0.23
CCDC58-207ENST00000498466 TCF20Q9UGU0 1960 aaKnown RBP16.51■□□□□ 0.23
CCDC58-207ENST00000498466 KIF28PB7ZC32 967 aa16.5■□□□□ 0.23
CCDC58-207ENST00000498466 ICAM1P05362 532 aa16.5■□□□□ 0.23
CCDC58-207ENST00000498466 RFC2P35250 354 aa16.5■□□□□ 0.23
CCDC58-207ENST00000498466 ALDH5A1P51649 535 aaPredicted RBP16.5■□□□□ 0.23
CCDC58-207ENST00000498466 BAATQ14032 418 aaPredicted RBP16.5■□□□□ 0.23
CCDC58-207ENST00000498466 CCDC96Q2M329 555 aa16.5■□□□□ 0.23
CCDC58-207ENST00000498466 BRDTQ58F21 947 aaPredicted RBP16.5■□□□□ 0.23
CCDC58-207ENST00000498466 RASGRP2Q7LDG7 609 aa16.5■□□□□ 0.23
CCDC58-207ENST00000498466 RETREG2Q8NC44 543 aa16.5■□□□□ 0.23
CCDC58-207ENST00000498466 PHOSPHO2Q8TCD6 241 aa16.5■□□□□ 0.23
CCDC58-207ENST00000498466 SEC62Q99442 399 aaKnown RBP16.5■□□□□ 0.23
CCDC58-207ENST00000498466 EPHX3Q9H6B9 360 aa16.5■□□□□ 0.23
CCDC58-207ENST00000498466 HCN4Q9Y3Q4 1203 aa16.5■□□□□ 0.23
CCDC58-207ENST00000498466 TAP1Q03518 808 aa16.49■□□□□ 0.23
CCDC58-207ENST00000498466 NBPF20Q3BBV1 942 aa16.49■□□□□ 0.23
CCDC58-207ENST00000498466 HERC6Q8IVU3 1022 aa16.49■□□□□ 0.23
CCDC58-207ENST00000498466 PPP1R13LQ8WUF5 828 aa16.49■□□□□ 0.23
CCDC58-207ENST00000498466 HLA-CQ95604 372 aa16.49■□□□□ 0.23
CCDC58-207ENST00000498466 LRFN3Q9BTN0 628 aa16.49■□□□□ 0.23
CCDC58-207ENST00000498466 RAD50Q92878 1312 aa16.48■□□□□ 0.23
CCDC58-207ENST00000498466 PTPDC1A2A3K4 754 aa16.48■□□□□ 0.23
CCDC58-207ENST00000498466 PITPNM1O00562 1244 aa16.48■□□□□ 0.23
CCDC58-207ENST00000498466 TLL1O43897 1013 aa16.48■□□□□ 0.23
CCDC58-207ENST00000498466 NMT2O60551 498 aa16.48■□□□□ 0.23
CCDC58-207ENST00000498466 ARHGEF15O94989 841 aa16.48■□□□□ 0.23
CCDC58-207ENST00000498466 IQCF3P0C7M6 154 aa16.48■□□□□ 0.23
CCDC58-207ENST00000498466 RANBP17Q9H2T7 1088 aaKnown RBP16.48■□□□□ 0.23
CCDC58-207ENST00000498466 IL17RBQ9NRM6 502 aa16.48■□□□□ 0.23
CCDC58-207ENST00000498466 NOD1Q9Y239 953 aa16.48■□□□□ 0.23
CCDC58-207ENST00000498466 NCOR1O75376 2440 aa16.48■□□□□ 0.23
CCDC58-207ENST00000498466 LOC102724159A0A0B4J2E5 919 aa16.47■□□□□ 0.23
CCDC58-207ENST00000498466 RBM47A0AV96 593 aaKnown RBP16.47■□□□□ 0.23
CCDC58-207ENST00000498466 NFIBO00712 420 aa16.47■□□□□ 0.23
CCDC58-207ENST00000498466 CALML3P27482 149 aa16.47■□□□□ 0.23
CCDC58-207ENST00000498466 SLC16A2P36021 539 aa16.47■□□□□ 0.23
CCDC58-207ENST00000498466 CTDSPL2Q05D32 466 aa16.47■□□□□ 0.23
CCDC58-207ENST00000498466 BFSP2Q13515 415 aa16.47■□□□□ 0.23
CCDC58-207ENST00000498466 PPP2R5BQ15173 497 aa16.47■□□□□ 0.23
CCDC58-207ENST00000498466 PWP2Q15269 919 aaKnown RBP16.47■□□□□ 0.23
CCDC58-207ENST00000498466 TMEM31Q5JXX7 168 aa16.47■□□□□ 0.23
CCDC58-207ENST00000498466 NFRKBQ6P4R8 1299 aa16.47■□□□□ 0.23
CCDC58-207ENST00000498466 INCENPQ9NQS7 918 aa16.47■□□□□ 0.23
CCDC58-207ENST00000498466 RANBP6O60518 1105 aaKnown RBP16.46■□□□□ 0.23
CCDC58-207ENST00000498466 KPNA6O60684 536 aa16.46■□□□□ 0.23
CCDC58-207ENST00000498466 CHMP4BP1P59074 171 aa16.46■□□□□ 0.23
CCDC58-207ENST00000498466 PDE4DQ08499 809 aa16.46■□□□□ 0.23
CCDC58-207ENST00000498466 GRB10Q13322 594 aa16.46■□□□□ 0.23
CCDC58-207ENST00000498466 TTBK2Q6IQ55 1244 aa16.46■□□□□ 0.23
CCDC58-207ENST00000498466 DCAF4Q8WV16 495 aa16.46■□□□□ 0.23
CCDC58-207ENST00000498466 MPHOSPH6Q99547 160 aaKnown RBP16.46■□□□□ 0.23
CCDC58-207ENST00000498466 FSD1Q9BTV5 496 aa16.46■□□□□ 0.23
CCDC58-207ENST00000498466 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.46■□□□□ 0.23
CCDC58-207ENST00000498466 ARIH1Q9Y4X5 557 aaPredicted RBP16.46■□□□□ 0.23
CCDC58-207ENST00000498466 NKRFO15226 690 aaKnown RBP eCLIP16.45■□□□□ 0.22
CCDC58-207ENST00000498466 BAIAP3O94812 1187 aa16.45■□□□□ 0.22
CCDC58-207ENST00000498466 KCNJ6P48051 423 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms