RNA–Protein interactions for RNA: ENST00000498160.5

CTDSP1-215, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-215ENST00000498160 KRT40Q6A162 431 aa20.15■□□□□ 0.82
CTDSP1-215ENST00000498160 NSMFQ6X4W1 530 aa20.15■□□□□ 0.82
CTDSP1-215ENST00000498160 GPR142Q7Z601 462 aa20.15■□□□□ 0.82
CTDSP1-215ENST00000498160 REXO1Q8N1G1 1221 aaKnown RBP20.15■□□□□ 0.82
CTDSP1-215ENST00000498160 IPO9Q96P70 1041 aaKnown RBP20.15■□□□□ 0.82
CTDSP1-215ENST00000498160 PORCNQ9H237 461 aa20.15■□□□□ 0.82
CTDSP1-215ENST00000498160 EFCC1Q9HA90 598 aa20.15■□□□□ 0.82
CTDSP1-215ENST00000498160 CFBP00751 764 aa20.14■□□□□ 0.81
CTDSP1-215ENST00000498160 PTPREP23469 700 aa20.14■□□□□ 0.81
CTDSP1-215ENST00000498160 KRT2P35908 639 aa20.14■□□□□ 0.81
CTDSP1-215ENST00000498160 MUM1L1Q5H9M0 696 aa20.14■□□□□ 0.81
CTDSP1-215ENST00000498160 BLIDQ8IZY5 108 aa20.14■□□□□ 0.81
CTDSP1-215ENST00000498160 DNERQ8NFT8 737 aa20.14■□□□□ 0.81
CTDSP1-215ENST00000498160 A1CFQ9NQ94 594 aaKnown RBP20.14■□□□□ 0.81
CTDSP1-215ENST00000498160 ADD3Q9UEY8 706 aaKnown RBP20.14■□□□□ 0.81
CTDSP1-215ENST00000498160 SPDYE3A6NKU9 549 aa20.13■□□□□ 0.81
CTDSP1-215ENST00000498160 NFIBO00712 420 aa20.13■□□□□ 0.81
CTDSP1-215ENST00000498160 PRMT2P55345 433 aa20.13■□□□□ 0.81
CTDSP1-215ENST00000498160 GNL2Q13823 731 aaKnown RBP20.13■□□□□ 0.81
CTDSP1-215ENST00000498160 GRB14Q14449 540 aa20.13■□□□□ 0.81
CTDSP1-215ENST00000498160 TYW1BQ6NUM6 668 aa20.13■□□□□ 0.81
CTDSP1-215ENST00000498160 AIFM3Q96NN9 605 aa20.13■□□□□ 0.81
CTDSP1-215ENST00000498160 NUDT12Q9BQG2 462 aa20.13■□□□□ 0.81
CTDSP1-215ENST00000498160 CYP39A1Q9NYL5 469 aa20.13■□□□□ 0.81
CTDSP1-215ENST00000498160 DIS3Q9Y2L1 958 aaKnown RBP20.13■□□□□ 0.81
CTDSP1-215ENST00000498160 MGAMO43451 1857 aa20.12■□□□□ 0.81
CTDSP1-215ENST00000498160 PLXNB2O15031 1838 aa20.12■□□□□ 0.81
CTDSP1-215ENST00000498160 PSMC4P43686 418 aa20.12■□□□□ 0.81
CTDSP1-215ENST00000498160 RPS6P62753 249 aaKnown RBP20.12■□□□□ 0.81
CTDSP1-215ENST00000498160 KRT25Q7Z3Z0 450 aa20.12■□□□□ 0.81
CTDSP1-215ENST00000498160 FOXP1Q9H334 677 aaPredicted RBP20.12■□□□□ 0.81
CTDSP1-215ENST00000498160 R3HDMLQ9H3Y0 253 aa20.12■□□□□ 0.81
CTDSP1-215ENST00000498160 FOXD4L1Q9NU39 408 aa20.12■□□□□ 0.81
CTDSP1-215ENST00000498160 POTEB2H3BUK9 544 aa20.11■□□□□ 0.81
CTDSP1-215ENST00000498160 OPLAHO14841 1288 aa20.11■□□□□ 0.81
CTDSP1-215ENST00000498160 STX6O43752 255 aa20.11■□□□□ 0.81
CTDSP1-215ENST00000498160 SYT1P21579 422 aa20.11■□□□□ 0.81
CTDSP1-215ENST00000498160 RGS2P41220 211 aa20.11■□□□□ 0.81
CTDSP1-215ENST00000498160 TRMT44Q8IYL2 757 aaKnown RBP20.11■□□□□ 0.81
CTDSP1-215ENST00000498160 MSL3Q8N5Y2 521 aaKnown RBP20.11■□□□□ 0.81
CTDSP1-215ENST00000498160 MEIS2O14770 477 aa20.1■□□□□ 0.81
CTDSP1-215ENST00000498160 PEX10O60683 326 aa20.1■□□□□ 0.81
CTDSP1-215ENST00000498160 HOXC6P09630 235 aa20.1■□□□□ 0.81
CTDSP1-215ENST00000498160 ADORA2AP29274 412 aa20.1■□□□□ 0.81
CTDSP1-215ENST00000498160 CTCFP49711 727 aaPredicted RBP20.1■□□□□ 0.81
CTDSP1-215ENST00000498160 CLK2P49760 499 aaKnown RBP20.1■□□□□ 0.81
CTDSP1-215ENST00000498160 MAP2K5Q13163 448 aa20.1■□□□□ 0.81
CTDSP1-215ENST00000498160 BAATQ14032 418 aaPredicted RBP20.1■□□□□ 0.81
CTDSP1-215ENST00000498160 MORN1Q5T089 497 aa20.1■□□□□ 0.81
CTDSP1-215ENST00000498160 ZNF467Q7Z7K2 595 aaPredicted RBP20.1■□□□□ 0.81
CTDSP1-215ENST00000498160 DIS3L2Q8IYB7 885 aaKnown RBP20.1■□□□□ 0.81
CTDSP1-215ENST00000498160 SYTL5Q8TDW5 730 aaPredicted RBP20.1■□□□□ 0.81
CTDSP1-215ENST00000498160 NSUN6Q8TEA1 469 aaKnown RBP20.1■□□□□ 0.81
CTDSP1-215ENST00000498160 ZNF296Q8WUU4 475 aaPredicted RBP20.1■□□□□ 0.81
CTDSP1-215ENST00000498160 NAP1L4Q99733 375 aaKnown RBP20.1■□□□□ 0.81
CTDSP1-215ENST00000498160 CIZ1Q9ULV3 898 aaPredicted RBP20.1■□□□□ 0.81
CTDSP1-215ENST00000498160 KCNJ14Q9UNX9 436 aa20.1■□□□□ 0.81
CTDSP1-215ENST00000498160 DNAJC25-GNG10A0A024R161 153 aa20.09■□□□□ 0.81
CTDSP1-215ENST00000498160 CCDC194A0A1B0GVG4 234 aa20.09■□□□□ 0.81
CTDSP1-215ENST00000498160 NUCB2P80303 420 aa20.09■□□□□ 0.81
CTDSP1-215ENST00000498160 XRRA1Q6P2D8 792 aa20.09■□□□□ 0.81
CTDSP1-215ENST00000498160 BRAPQ7Z569 592 aa20.09■□□□□ 0.81
CTDSP1-215ENST00000498160 DPP9Q86TI2 863 aa20.09■□□□□ 0.81
CTDSP1-215ENST00000498160 SPRYD3Q8NCJ5 442 aa20.09■□□□□ 0.81
CTDSP1-215ENST00000498160 IWS1Q96ST2 819 aa20.09■□□□□ 0.81
CTDSP1-215ENST00000498160 ZSCAN16Q9H4T2 348 aaPredicted RBP20.09■□□□□ 0.81
CTDSP1-215ENST00000498160 SMCHD1A6NHR9 2005 aa20.09■□□□□ 0.81
CTDSP1-215ENST00000498160 VPS37CA5D8V6 355 aaPredicted RBP20.08■□□□□ 0.81
CTDSP1-215ENST00000498160 ASB14A6NK59 587 aa20.08■□□□□ 0.81
CTDSP1-215ENST00000498160 XRCC5P13010 732 aaKnown RBP20.08■□□□□ 0.81
CTDSP1-215ENST00000498160 U2AF2P26368 475 aaKnown RBP eCLIP20.08■□□□□ 0.81
CTDSP1-215ENST00000498160 USP17L6PQ6QN14 398 aa20.08■□□□□ 0.81
CTDSP1-215ENST00000498160 SLC30A10Q6XR72 485 aa20.08■□□□□ 0.81
CTDSP1-215ENST00000498160 FAM133AQ8N9E0 248 aa20.08■□□□□ 0.81
CTDSP1-215ENST00000498160 APBA2Q99767 749 aa20.08■□□□□ 0.81
CTDSP1-215ENST00000498160 FRMPD4Q14CM0 1322 aa20.07■□□□□ 0.8
CTDSP1-215ENST00000498160 CASP8AP2Q9UKL3 1982 aa20.07■□□□□ 0.8
CTDSP1-215ENST00000498160 M0R2N6 131 aa20.07■□□□□ 0.8
CTDSP1-215ENST00000498160 STAM2O75886 525 aa20.07■□□□□ 0.8
CTDSP1-215ENST00000498160 TAL1P17542 331 aaPredicted RBP20.07■□□□□ 0.8
CTDSP1-215ENST00000498160 NONOQ15233 471 aaKnown RBP eCLIP20.07■□□□□ 0.82e-6■■■■□ 25.2
CTDSP1-215ENST00000498160 NPY5RQ15761 445 aa20.07■□□□□ 0.8
CTDSP1-215ENST00000498160 CD99L2Q8TCZ2 262 aa20.07■□□□□ 0.8
CTDSP1-215ENST00000498160 TRIM47Q96LD4 638 aa20.07■□□□□ 0.8
CTDSP1-215ENST00000498160 RMDN3Q96TC7 470 aa20.07■□□□□ 0.8
CTDSP1-215ENST00000498160 ANO3Q9BYT9 981 aa20.07■□□□□ 0.8
CTDSP1-215ENST00000498160 PCDHA6Q9UN73 950 aa20.07■□□□□ 0.8
CTDSP1-215ENST00000498160 PCDHA8Q9Y5H6 950 aa20.07■□□□□ 0.8
CTDSP1-215ENST00000498160 HSPA1AP0DMV8 641 aaKnown RBP20.06■□□□□ 0.8
CTDSP1-215ENST00000498160 HSPA1BP0DMV9 641 aaKnown RBP20.06■□□□□ 0.8
CTDSP1-215ENST00000498160 HOXA13P31271 388 aaPredicted RBP20.06■□□□□ 0.8
CTDSP1-215ENST00000498160 TRAPPC10P48553 1259 aa20.06■□□□□ 0.8
CTDSP1-215ENST00000498160 FOSBP53539 338 aa20.06■□□□□ 0.8
CTDSP1-215ENST00000498160 GUCY1B3Q02153 619 aa20.06■□□□□ 0.8
CTDSP1-215ENST00000498160 IRF5Q13568 498 aa20.06■□□□□ 0.8
CTDSP1-215ENST00000498160 UBE2SQ16763 222 aa20.06■□□□□ 0.8
CTDSP1-215ENST00000498160 ZNF792Q3KQV3 632 aa20.06■□□□□ 0.8
CTDSP1-215ENST00000498160 ARHGEF16Q5VV41 709 aa20.06■□□□□ 0.8
CTDSP1-215ENST00000498160 MCTP1Q6DN14 999 aa20.06■□□□□ 0.8
CTDSP1-215ENST00000498160 FCHSD1Q86WN1 690 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms