RNA–Protein interactions for RNA: ENST00000498037.1

ALK-204, Transcript of ALK receptor tyrosine kinase, humanhuman

TSL 4

Gene ALK, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-204ENST00000498037 PPP1R11O60927 126 aaPredicted RBP13.16□□□□□ -0.3
ALK-204ENST00000498037 PGK1P00558 417 aa13.16□□□□□ -0.3
ALK-204ENST00000498037 CAPN2P17655 700 aa13.16□□□□□ -0.3
ALK-204ENST00000498037 GNAQP50148 359 aa13.16□□□□□ -0.3
ALK-204ENST00000498037 EXOSC10Q01780 885 aaKnown RBP13.16□□□□□ -0.3
ALK-204ENST00000498037 PDE4DQ08499 809 aa13.16□□□□□ -0.3
ALK-204ENST00000498037 SLC35G1Q2M3R5 365 aa13.16□□□□□ -0.3
ALK-204ENST00000498037 TSGA10IPQ3SY00 556 aa13.16□□□□□ -0.3
ALK-204ENST00000498037 APOA5Q6Q788 366 aa13.16□□□□□ -0.3
ALK-204ENST00000498037 MCF2L2Q86YR7 1114 aa13.16□□□□□ -0.3
ALK-204ENST00000498037 ARRDC4Q8NCT1 418 aa13.16□□□□□ -0.3
ALK-204ENST00000498037 TBC1D5Q92609 795 aa13.16□□□□□ -0.3
ALK-204ENST00000498037 MPHOSPH6Q99547 160 aaKnown RBP13.16□□□□□ -0.3
ALK-204ENST00000498037 SENP6Q9GZR1 1112 aaPredicted RBP13.16□□□□□ -0.3
ALK-204ENST00000498037 RIOX1Q9H6W3 641 aa13.16□□□□□ -0.3
ALK-204ENST00000498037 ASTN1O14525 1302 aa13.15□□□□□ -0.3
ALK-204ENST00000498037 PNMA6FA0A0J9YX94 578 aa13.15□□□□□ -0.3
ALK-204ENST00000498037 EVI5O60447 810 aa13.15□□□□□ -0.3
ALK-204ENST00000498037 RPS6KB1P23443 525 aa13.15□□□□□ -0.3
ALK-204ENST00000498037 ATN1P54259 1190 aaPredicted RBP13.15□□□□□ -0.3
ALK-204ENST00000498037 APOBRQ0VD83 1088 aa13.15□□□□□ -0.3
ALK-204ENST00000498037 RTN1Q16799 776 aa13.15□□□□□ -0.3
ALK-204ENST00000498037 CCDC144BQ3MJ40 725 aa13.15□□□□□ -0.3
ALK-204ENST00000498037 UBE2Q1Q7Z7E8 422 aa13.15□□□□□ -0.3
ALK-204ENST00000498037 FANCBQ8NB91 859 aa13.15□□□□□ -0.3
ALK-204ENST00000498037 BRF1Q92994 677 aa13.15□□□□□ -0.3
ALK-204ENST00000498037 FERMT2Q96AC1 680 aa13.15□□□□□ -0.3
ALK-204ENST00000498037 MAP3K14Q99558 947 aa13.15□□□□□ -0.3
ALK-204ENST00000498037 LZTS2Q9BRK4 669 aa13.15□□□□□ -0.3
ALK-204ENST00000498037 USP26Q9BXU7 913 aa13.15□□□□□ -0.3
ALK-204ENST00000498037 BRPF3Q9ULD4 1205 aa13.15□□□□□ -0.3
ALK-204ENST00000498037 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.14□□□□□ -0.31
ALK-204ENST00000498037 DNM1LO00429 736 aa13.14□□□□□ -0.31
ALK-204ENST00000498037 EIF2AK2P19525 551 aaKnown RBP13.14□□□□□ -0.31
ALK-204ENST00000498037 HOXA13P31271 388 aaPredicted RBP13.14□□□□□ -0.31
ALK-204ENST00000498037 ADCYAP1R1P41586 468 aa13.14□□□□□ -0.31
ALK-204ENST00000498037 MNX1P50219 401 aaPredicted RBP13.14□□□□□ -0.31
ALK-204ENST00000498037 TRAF1Q13077 416 aa13.14□□□□□ -0.31
ALK-204ENST00000498037 LRRC41Q15345 812 aa13.14□□□□□ -0.31
ALK-204ENST00000498037 ARHGEF16Q5VV41 709 aa13.14□□□□□ -0.31
ALK-204ENST00000498037 TMTC3Q6ZXV5 915 aa13.14□□□□□ -0.31
ALK-204ENST00000498037 RNF180Q86T96 592 aa13.14□□□□□ -0.31
ALK-204ENST00000498037 SGMS1Q86VZ5 419 aa13.14□□□□□ -0.31
ALK-204ENST00000498037 C7orf61Q8IZ16 206 aa13.14□□□□□ -0.31
ALK-204ENST00000498037 SRBD1Q8N5C6 995 aaKnown RBP13.14□□□□□ -0.31
ALK-204ENST00000498037 KCNB2Q92953 911 aa13.14□□□□□ -0.31
ALK-204ENST00000498037 MTMR8Q96EF0 704 aa13.14□□□□□ -0.31
ALK-204ENST00000498037 TAAR1Q96RJ0 339 aa13.14□□□□□ -0.31
ALK-204ENST00000498037 SPZ1Q9BXG8 430 aa13.14□□□□□ -0.31
ALK-204ENST00000498037 SPC25Q9HBM1 224 aa13.14□□□□□ -0.31
ALK-204ENST00000498037 RBM28Q9NW13 759 aaKnown RBP13.14□□□□□ -0.31
ALK-204ENST00000498037 SYNRGQ9UMZ2 1314 aa13.13□□□□□ -0.31
ALK-204ENST00000498037 CEP290O15078 2479 aa13.13□□□□□ -0.31
ALK-204ENST00000498037 B4DLN1 442 aa13.13□□□□□ -0.31
ALK-204ENST00000498037 C6orf222P0C671 652 aaPredicted RBP13.13□□□□□ -0.31
ALK-204ENST00000498037 METAP2P50579 478 aaKnown RBP eCLIP13.13□□□□□ -0.31
ALK-204ENST00000498037 MRPL12P52815 198 aaKnown RBP13.13□□□□□ -0.31
ALK-204ENST00000498037 TNFAIP2Q03169 654 aa13.13□□□□□ -0.31
ALK-204ENST00000498037 FCHSD1Q86WN1 690 aa13.13□□□□□ -0.31
ALK-204ENST00000498037 SYTL5Q8TDW5 730 aaPredicted RBP13.13□□□□□ -0.31
ALK-204ENST00000498037 RMDN3Q96TC7 470 aa13.13□□□□□ -0.31
ALK-204ENST00000498037 UPF3BQ9BZI7 483 aaKnown RBP13.13□□□□□ -0.31
ALK-204ENST00000498037 VTA1Q9NP79 307 aa13.13□□□□□ -0.31
ALK-204ENST00000498037 PDGFCQ9NRA1 345 aa13.13□□□□□ -0.31
ALK-204ENST00000498037 COL20A1Q9P218 1284 aa13.13□□□□□ -0.31
ALK-204ENST00000498037 CYP46A1Q9Y6A2 500 aa13.13□□□□□ -0.31
ALK-204ENST00000498037 GCOM1H8Y6P7 765 aaPredicted RBP13.12□□□□□ -0.31
ALK-204ENST00000498037 ADCY6O43306 1168 aa13.12□□□□□ -0.31
ALK-204ENST00000498037 EPB41L2O43491 1005 aaKnown RBP13.12□□□□□ -0.31
ALK-204ENST00000498037 POLR2MP0CAP2 368 aa13.12□□□□□ -0.31
ALK-204ENST00000498037 PTGS1P23219 599 aa13.12□□□□□ -0.31
ALK-204ENST00000498037 PRPF38BQ5VTL8 546 aaKnown RBP13.12□□□□□ -0.31
ALK-204ENST00000498037 RUFY3Q7L099 469 aa13.12□□□□□ -0.31
ALK-204ENST00000498037 HEATR3Q7Z4Q2 680 aa13.12□□□□□ -0.31
ALK-204ENST00000498037 RGS22Q8NE09 1264 aa13.12□□□□□ -0.31
ALK-204ENST00000498037 DNERQ8NFT8 737 aa13.12□□□□□ -0.31
ALK-204ENST00000498037 KATNBL1Q9H079 304 aa13.12□□□□□ -0.31
ALK-204ENST00000498037 NR2E3Q9Y5X4 410 aa13.12□□□□□ -0.31
ALK-204ENST00000498037 CNTNAP5Q8WYK1 1306 aa13.12□□□□□ -0.31
ALK-204ENST00000498037 MYADML2A6NDP7 307 aa13.11□□□□□ -0.31
ALK-204ENST00000498037 OPLAHO14841 1288 aa13.11□□□□□ -0.31
ALK-204ENST00000498037 DUSP11O75319 330 aaKnown RBP13.11□□□□□ -0.31
ALK-204ENST00000498037 MYCLP12524 364 aaPredicted RBP13.11□□□□□ -0.31
ALK-204ENST00000498037 IRX5P78411 483 aaPredicted RBP13.11□□□□□ -0.31
ALK-204ENST00000498037 BEX3Q00994 111 aa13.11□□□□□ -0.31
ALK-204ENST00000498037 LRRC26Q2I0M4 334 aa13.11□□□□□ -0.31
ALK-204ENST00000498037 SEPT14Q6ZU15 432 aa13.11□□□□□ -0.31
ALK-204ENST00000498037 TLK2Q86UE8 772 aa13.11□□□□□ -0.31
ALK-204ENST00000498037 SMARCC2Q8TAQ2 1214 aa13.11□□□□□ -0.31
ALK-204ENST00000498037 NSUN6Q8TEA1 469 aaKnown RBP13.11□□□□□ -0.31
ALK-204ENST00000498037 GPKOWQ92917 476 aaPredicted RBP eCLIP13.11□□□□□ -0.31
ALK-204ENST00000498037 CUL5Q93034 780 aa13.11□□□□□ -0.31
ALK-204ENST00000498037 VTI1AQ96AJ9 217 aa13.11□□□□□ -0.31
ALK-204ENST00000498037 LARP6Q9BRS8 491 aaKnown RBP13.11□□□□□ -0.31
ALK-204ENST00000498037 AP5M1Q9H0R1 490 aa13.11□□□□□ -0.31
ALK-204ENST00000498037 ZMYND8Q9ULU4 1186 aaPredicted RBP13.11□□□□□ -0.31
ALK-204ENST00000498037 ATP11BQ9Y2G3 1177 aa13.11□□□□□ -0.31
ALK-204ENST00000498037 H0YGN5 161 aa13.1□□□□□ -0.31
ALK-204ENST00000498037 DYNC1LI2O43237 492 aaPredicted RBP13.1□□□□□ -0.31
ALK-204ENST00000498037 PPFIA3O75145 1194 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms