RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 CTAGE5O15320 804 aa13.79□□□□□ -0.2
NUDCD3-211ENST00000497978 SNHG28P0DPA3 235 aa13.79□□□□□ -0.2
NUDCD3-211ENST00000497978 SMPD1P17405 629 aa13.79□□□□□ -0.2
NUDCD3-211ENST00000497978 ALDH5A1P51649 535 aaPredicted RBP13.79□□□□□ -0.2
NUDCD3-211ENST00000497978 IMMTQ16891 758 aaKnown RBP13.79□□□□□ -0.2
NUDCD3-211ENST00000497978 TAPT1Q6NXT6 567 aa13.79□□□□□ -0.2
NUDCD3-211ENST00000497978 RNF207Q6ZRF8 634 aa13.79□□□□□ -0.2
NUDCD3-211ENST00000497978 KIAA1211Q6ZU35 1233 aa13.79□□□□□ -0.2
NUDCD3-211ENST00000497978 RASEFQ8IZ41 740 aa13.79□□□□□ -0.2
NUDCD3-211ENST00000497978 MORC4Q8TE76 937 aa13.79□□□□□ -0.2
NUDCD3-211ENST00000497978 ZKSCAN3Q9BRR0 538 aa13.79□□□□□ -0.2
NUDCD3-211ENST00000497978 DSCC1Q9BVC3 393 aa13.79□□□□□ -0.2
NUDCD3-211ENST00000497978 SEZ6LQ9BYH1 1024 aa13.79□□□□□ -0.2
NUDCD3-211ENST00000497978 PDGFCQ9NRA1 345 aa13.79□□□□□ -0.2
NUDCD3-211ENST00000497978 TBX21Q9UL17 535 aa13.79□□□□□ -0.2
NUDCD3-211ENST00000497978 ASTN1O14525 1302 aa13.79□□□□□ -0.2
NUDCD3-211ENST00000497978 NEDD4P46934 1319 aa13.79□□□□□ -0.2
NUDCD3-211ENST00000497978 B4DLN1 442 aa13.78□□□□□ -0.2
NUDCD3-211ENST00000497978 KDM4AO75164 1064 aa13.78□□□□□ -0.2
NUDCD3-211ENST00000497978 CALML3P27482 149 aa13.78□□□□□ -0.2
NUDCD3-211ENST00000497978 MRPL12P52815 198 aaKnown RBP13.78□□□□□ -0.2
NUDCD3-211ENST00000497978 EPHB4P54760 987 aa13.78□□□□□ -0.2
NUDCD3-211ENST00000497978 PPIGQ13427 754 aaKnown RBP eCLIP13.78□□□□□ -0.21e-9■■□□□ 12.9
NUDCD3-211ENST00000497978 MFSD5Q6N075 450 aa13.78□□□□□ -0.2
NUDCD3-211ENST00000497978 CXCL17Q6UXB2 119 aa13.78□□□□□ -0.2
NUDCD3-211ENST00000497978 FAM126BQ8IXS8 530 aa13.78□□□□□ -0.2
NUDCD3-211ENST00000497978 TMEM199Q8N511 208 aa13.78□□□□□ -0.2
NUDCD3-211ENST00000497978 GUCD1Q96NT3 240 aa13.78□□□□□ -0.2
NUDCD3-211ENST00000497978 PURBQ96QR8 312 aaKnown RBP13.78□□□□□ -0.2
NUDCD3-211ENST00000497978 KAT14Q9H8E8 782 aa13.78□□□□□ -0.2
NUDCD3-211ENST00000497978 FARP1Q9Y4F1 1045 aaPredicted RBP13.78□□□□□ -0.2
NUDCD3-211ENST00000497978 DDX49Q9Y6V7 483 aaKnown RBP13.78□□□□□ -0.2
NUDCD3-211ENST00000497978 WDR19Q8NEZ3 1342 aa13.78□□□□□ -0.2
NUDCD3-211ENST00000497978 LRRC37A2A6NM11 1700 aa13.77□□□□□ -0.21
NUDCD3-211ENST00000497978 PDE4DQ08499 809 aa13.77□□□□□ -0.21
NUDCD3-211ENST00000497978 ITGA7Q13683 1181 aa13.77□□□□□ -0.21
NUDCD3-211ENST00000497978 LAMA4Q16363 1823 aa13.77□□□□□ -0.21
NUDCD3-211ENST00000497978 DUSP28Q4G0W2 176 aa13.77□□□□□ -0.21
NUDCD3-211ENST00000497978 PNMA1Q8ND90 353 aa13.77□□□□□ -0.21
NUDCD3-211ENST00000497978 CLEC4DQ8WXI8 215 aa13.77□□□□□ -0.21
NUDCD3-211ENST00000497978 ZSCAN10Q96SZ4 725 aaPredicted RBP13.77□□□□□ -0.21
NUDCD3-211ENST00000497978 KRT23Q9C075 422 aa13.77□□□□□ -0.21
NUDCD3-211ENST00000497978 SEMA6BQ9H3T3 888 aa13.77□□□□□ -0.21
NUDCD3-211ENST00000497978 CNNM2Q9H8M5 875 aa13.77□□□□□ -0.21
NUDCD3-211ENST00000497978 LCTP09848 1927 aa13.76□□□□□ -0.21
NUDCD3-211ENST00000497978 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.76□□□□□ -0.21
NUDCD3-211ENST00000497978 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.76□□□□□ -0.21
NUDCD3-211ENST00000497978 B4E1Z4 1266 aa13.76□□□□□ -0.21
NUDCD3-211ENST00000497978 GOLGA8HP0CJ92 632 aa13.76□□□□□ -0.21
NUDCD3-211ENST00000497978 RPS6P62753 249 aaKnown RBP13.76□□□□□ -0.21
NUDCD3-211ENST00000497978 USH1GQ495M9 461 aa13.76□□□□□ -0.21
NUDCD3-211ENST00000497978 ASPRV1Q53RT3 343 aa13.76□□□□□ -0.21
NUDCD3-211ENST00000497978 SLC30A10Q6XR72 485 aa13.76□□□□□ -0.21
NUDCD3-211ENST00000497978 PIP4P2Q8N4L2 257 aa13.76□□□□□ -0.21
NUDCD3-211ENST00000497978 SLC43A3Q8NBI5 491 aa13.76□□□□□ -0.21
NUDCD3-211ENST00000497978 DNERQ8NFT8 737 aa13.76□□□□□ -0.21
NUDCD3-211ENST00000497978 ANKS1AQ92625 1134 aa13.76□□□□□ -0.21
NUDCD3-211ENST00000497978 UBAC1Q9BSL1 405 aa13.76□□□□□ -0.21
NUDCD3-211ENST00000497978 WDR11Q9BZH6 1224 aa13.76□□□□□ -0.21
NUDCD3-211ENST00000497978 PPP1R12CQ9BZL4 782 aa13.76□□□□□ -0.21
NUDCD3-211ENST00000497978 RAD50Q92878 1312 aa13.75□□□□□ -0.21
NUDCD3-211ENST00000497978 TMEM265A0A087WTH1 108 aa13.75□□□□□ -0.21
NUDCD3-211ENST00000497978 DLL1O00548 723 aa13.75□□□□□ -0.21
NUDCD3-211ENST00000497978 NKRFO15226 690 aaKnown RBP eCLIP13.75□□□□□ -0.21
NUDCD3-211ENST00000497978 CD4P01730 458 aa13.75□□□□□ -0.21
NUDCD3-211ENST00000497978 CPT1AP50416 773 aa13.75□□□□□ -0.21
NUDCD3-211ENST00000497978 CDC37Q16543 378 aaPredicted RBP13.75□□□□□ -0.21
NUDCD3-211ENST00000497978 BRDTQ58F21 947 aaPredicted RBP13.75□□□□□ -0.21
NUDCD3-211ENST00000497978 RGS22Q8NE09 1264 aa13.75□□□□□ -0.21
NUDCD3-211ENST00000497978 CDX2Q99626 313 aaPredicted RBP13.75□□□□□ -0.21
NUDCD3-211ENST00000497978 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.75□□□□□ -0.213e-6■■□□□ 12.1
NUDCD3-211ENST00000497978 UBA5Q9GZZ9 404 aa13.75□□□□□ -0.21
NUDCD3-211ENST00000497978 MAF1Q9H063 256 aa13.75□□□□□ -0.21
NUDCD3-211ENST00000497978 GPHNQ9NQX3 736 aaPredicted RBP13.75□□□□□ -0.21
NUDCD3-211ENST00000497978 POLR3EQ9NVU0 708 aa13.75□□□□□ -0.21
NUDCD3-211ENST00000497978 ZSWIM5Q9P217 1185 aa13.75□□□□□ -0.21
NUDCD3-211ENST00000497978 SUPT16HQ9Y5B9 1047 aaKnown RBP13.75□□□□□ -0.21
NUDCD3-211ENST00000497978 TNKSO95271 1327 aa13.74□□□□□ -0.21
NUDCD3-211ENST00000497978 ABCB11O95342 1321 aa13.74□□□□□ -0.21
NUDCD3-211ENST00000497978 RBM47A0AV96 593 aaKnown RBP13.74□□□□□ -0.21
NUDCD3-211ENST00000497978 DHX16O60231 1041 aaKnown RBP13.74□□□□□ -0.21
NUDCD3-211ENST00000497978 PARP1P09874 1014 aaKnown RBP13.74□□□□□ -0.21
NUDCD3-211ENST00000497978 CSF2RAP15509 400 aa13.74□□□□□ -0.21
NUDCD3-211ENST00000497978 PTGS1P23219 599 aa13.74□□□□□ -0.21
NUDCD3-211ENST00000497978 PPP2R5BQ15173 497 aa13.74□□□□□ -0.21
NUDCD3-211ENST00000497978 PSRC1Q6PGN9 363 aaPredicted RBP13.74□□□□□ -0.21
NUDCD3-211ENST00000497978 ADGRF4Q8IZF3 695 aa13.74□□□□□ -0.21
NUDCD3-211ENST00000497978 ENAHQ8N8S7 591 aaPredicted RBP13.74□□□□□ -0.21
NUDCD3-211ENST00000497978 OR6J1Q8NGC5 347 aa13.74□□□□□ -0.21
NUDCD3-211ENST00000497978 SCFD2Q8WU76 684 aa13.74□□□□□ -0.21
NUDCD3-211ENST00000497978 RUFY2Q8WXA3 655 aa13.74□□□□□ -0.21
NUDCD3-211ENST00000497978 HIPK3Q9H422 1215 aa13.74□□□□□ -0.21
NUDCD3-211ENST00000497978 MYL3P08590 195 aa13.73□□□□□ -0.21
NUDCD3-211ENST00000497978 EDNRBP24530 442 aa13.73□□□□□ -0.21
NUDCD3-211ENST00000497978 CYP2C18P33260 490 aa13.73□□□□□ -0.21
NUDCD3-211ENST00000497978 PSMC6P62333 389 aa13.73□□□□□ -0.21
NUDCD3-211ENST00000497978 TRDNQ13061 729 aa13.73□□□□□ -0.21
NUDCD3-211ENST00000497978 TMEM240Q5SV17 173 aa13.73□□□□□ -0.21
NUDCD3-211ENST00000497978 TMEM63BQ5T3F8 832 aa13.73□□□□□ -0.21
NUDCD3-211ENST00000497978 IFIT1BQ5T764 474 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms