RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 ADD3Q9UEY8 706 aaKnown RBP18.54■□□□□ 0.56
CTDSP1-214ENST00000497677 MRPL11Q9Y3B7 192 aaKnown RBP18.54■□□□□ 0.56
CTDSP1-214ENST00000497677 SNX14Q9Y5W7 946 aa18.54■□□□□ 0.56
CTDSP1-214ENST00000497677 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.53■□□□□ 0.56
CTDSP1-214ENST00000497677 CCDC69A6NI79 296 aa18.53■□□□□ 0.56
CTDSP1-214ENST00000497677 SMARCA1P28370 1054 aa18.53■□□□□ 0.56
CTDSP1-214ENST00000497677 RBM25P49756 843 aaKnown RBP18.53■□□□□ 0.56
CTDSP1-214ENST00000497677 IRX5P78411 483 aaPredicted RBP18.53■□□□□ 0.56
CTDSP1-214ENST00000497677 GHRHRQ02643 423 aa18.53■□□□□ 0.56
CTDSP1-214ENST00000497677 CCSAPQ6IQ19 270 aaPredicted RBP18.53■□□□□ 0.56
CTDSP1-214ENST00000497677 NFXL1Q6ZNB6 911 aa18.53■□□□□ 0.56
CTDSP1-214ENST00000497677 KLHDC9Q8NEP7 349 aa18.53■□□□□ 0.56
CTDSP1-214ENST00000497677 DNERQ8NFT8 737 aa18.53■□□□□ 0.56
CTDSP1-214ENST00000497677 PDGFCQ9NRA1 345 aa18.53■□□□□ 0.56
CTDSP1-214ENST00000497677 PCDHA1Q9Y5I3 950 aa18.53■□□□□ 0.56
CTDSP1-214ENST00000497677 NR2E3Q9Y5X4 410 aa18.53■□□□□ 0.56
CTDSP1-214ENST00000497677 SYNRGQ9UMZ2 1314 aa18.52■□□□□ 0.56
CTDSP1-214ENST00000497677 PNMA6FA0A0J9YX94 578 aa18.52■□□□□ 0.56
CTDSP1-214ENST00000497677 RXRAP19793 462 aa18.52■□□□□ 0.56
CTDSP1-214ENST00000497677 KIF5BP33176 963 aa18.52■□□□□ 0.56
CTDSP1-214ENST00000497677 ADCYAP1R1P41586 468 aa18.52■□□□□ 0.56
CTDSP1-214ENST00000497677 NKX3-2P78367 333 aa18.52■□□□□ 0.56
CTDSP1-214ENST00000497677 EEPD1Q7L9B9 569 aa18.52■□□□□ 0.56
CTDSP1-214ENST00000497677 HOMER1Q86YM7 354 aa18.52■□□□□ 0.56
CTDSP1-214ENST00000497677 MCF2L2Q86YR7 1114 aa18.52■□□□□ 0.56
CTDSP1-214ENST00000497677 SRBD1Q8N5C6 995 aaKnown RBP18.52■□□□□ 0.56
CTDSP1-214ENST00000497677 CTCFLQ8NI51 663 aaPredicted RBP18.52■□□□□ 0.56
CTDSP1-214ENST00000497677 SPZ1Q9BXG8 430 aa18.52■□□□□ 0.56
CTDSP1-214ENST00000497677 USP26Q9BXU7 913 aa18.52■□□□□ 0.56
CTDSP1-214ENST00000497677 UPF3AQ9H1J1 476 aaKnown RBP18.52■□□□□ 0.56
CTDSP1-214ENST00000497677 PHF24Q9UPV7 400 aa18.52■□□□□ 0.56
CTDSP1-214ENST00000497677 GNEQ9Y223 722 aaKnown RBP18.52■□□□□ 0.56
CTDSP1-214ENST00000497677 SLC12A7Q9Y666 1083 aa18.52■□□□□ 0.56
CTDSP1-214ENST00000497677 PLXNA1Q9UIW2 1896 aa18.52■□□□□ 0.55
CTDSP1-214ENST00000497677 MYADML2A6NDP7 307 aa18.51■□□□□ 0.55
CTDSP1-214ENST00000497677 KBTBD13C9JR72 458 aa18.51■□□□□ 0.55
CTDSP1-214ENST00000497677 CTAGE5O15320 804 aa18.51■□□□□ 0.55
CTDSP1-214ENST00000497677 PLEKHA8P1O95397 391 aa18.51■□□□□ 0.55
CTDSP1-214ENST00000497677 MYCNP04198 464 aaPredicted RBP18.51■□□□□ 0.55
CTDSP1-214ENST00000497677 TMEM63BQ5T3F8 832 aa18.51■□□□□ 0.55
CTDSP1-214ENST00000497677 RNF180Q86T96 592 aa18.51■□□□□ 0.55
CTDSP1-214ENST00000497677 RAB11FIP4Q86YS3 637 aa18.51■□□□□ 0.55
CTDSP1-214ENST00000497677 FBXO16Q8IX29 292 aaPredicted RBP18.51■□□□□ 0.55
CTDSP1-214ENST00000497677 FANCBQ8NB91 859 aa18.51■□□□□ 0.55
CTDSP1-214ENST00000497677 TAAR1Q96RJ0 339 aa18.51■□□□□ 0.55
CTDSP1-214ENST00000497677 LZTS2Q9BRK4 669 aa18.51■□□□□ 0.55
CTDSP1-214ENST00000497677 VTA1Q9NP79 307 aa18.51■□□□□ 0.55
CTDSP1-214ENST00000497677 BRPF3Q9ULD4 1205 aa18.51■□□□□ 0.55
CTDSP1-214ENST00000497677 HMGB1P09429 215 aaKnown RBP18.5■□□□□ 0.55
CTDSP1-214ENST00000497677 CALM1P0DP23 149 aa18.5■□□□□ 0.55
CTDSP1-214ENST00000497677 CALM2P0DP24 149 aa18.5■□□□□ 0.55
CTDSP1-214ENST00000497677 CALM3P0DP25 149 aa18.5■□□□□ 0.55
CTDSP1-214ENST00000497677 CPA1P15085 419 aa18.5■□□□□ 0.55
CTDSP1-214ENST00000497677 SMPD1P17405 629 aa18.5■□□□□ 0.55
CTDSP1-214ENST00000497677 PTGS1P23219 599 aa18.5■□□□□ 0.55
CTDSP1-214ENST00000497677 CST5P28325 142 aaPredicted RBP18.5■□□□□ 0.55
CTDSP1-214ENST00000497677 GNAQP50148 359 aa18.5■□□□□ 0.55
CTDSP1-214ENST00000497677 HSD17B4P51659 736 aa18.5■□□□□ 0.55
CTDSP1-214ENST00000497677 ATN1P54259 1190 aaPredicted RBP18.5■□□□□ 0.55
CTDSP1-214ENST00000497677 GJA9P57773 515 aa18.5■□□□□ 0.55
CTDSP1-214ENST00000497677 TNFAIP2Q03169 654 aa18.5■□□□□ 0.55
CTDSP1-214ENST00000497677 IQSEC1Q6DN90 963 aa18.5■□□□□ 0.55
CTDSP1-214ENST00000497677 APOA5Q6Q788 366 aa18.5■□□□□ 0.55
CTDSP1-214ENST00000497677 IL27Q8NEV9 243 aa18.5■□□□□ 0.55
CTDSP1-214ENST00000497677 IPO9Q96P70 1041 aaKnown RBP18.5■□□□□ 0.55
CTDSP1-214ENST00000497677 TSEN34Q9BSV6 310 aaKnown RBP18.5■□□□□ 0.55
CTDSP1-214ENST00000497677 RBM47A0AV96 593 aaKnown RBP18.49■□□□□ 0.55
CTDSP1-214ENST00000497677 SNX17Q15036 470 aa18.49■□□□□ 0.55
CTDSP1-214ENST00000497677 SLC39A5Q6ZMH5 540 aa18.49■□□□□ 0.55
CTDSP1-214ENST00000497677 C7orf61Q8IZ16 206 aa18.49■□□□□ 0.55
CTDSP1-214ENST00000497677 CMTR1Q8N1G2 835 aaKnown RBP18.49■□□□□ 0.55
CTDSP1-214ENST00000497677 FERMT2Q96AC1 680 aa18.49■□□□□ 0.55
CTDSP1-214ENST00000497677 JAKMIP1Q96N16 626 aaKnown RBP18.49■□□□□ 0.55
CTDSP1-214ENST00000497677 CFBP00751 764 aa18.48■□□□□ 0.55
CTDSP1-214ENST00000497677 TRAF1Q13077 416 aa18.48■□□□□ 0.55
CTDSP1-214ENST00000497677 KCNA10Q16322 511 aa18.48■□□□□ 0.55
CTDSP1-214ENST00000497677 TMTC3Q6ZXV5 915 aa18.48■□□□□ 0.55
CTDSP1-214ENST00000497677 MICU3Q86XE3 530 aa18.48■□□□□ 0.55
CTDSP1-214ENST00000497677 FBXL16Q8N461 479 aa18.48■□□□□ 0.55
CTDSP1-214ENST00000497677 SAMD3Q8N6K7 520 aa18.48■□□□□ 0.55
CTDSP1-214ENST00000497677 NSUN6Q8TEA1 469 aaKnown RBP18.48■□□□□ 0.55
CTDSP1-214ENST00000497677 PIBF1Q8WXW3 757 aa18.48■□□□□ 0.55
CTDSP1-214ENST00000497677 FAM217BQ9NTX9 383 aaPredicted RBP18.48■□□□□ 0.55
CTDSP1-214ENST00000497677 MAP3K20Q9NYL2 800 aaKnown RBP18.48■□□□□ 0.55
CTDSP1-214ENST00000497677 C6orf222P0C671 652 aaPredicted RBP18.47■□□□□ 0.55
CTDSP1-214ENST00000497677 ACLYP53396 1101 aa18.47■□□□□ 0.55
CTDSP1-214ENST00000497677 PDE4DQ08499 809 aa18.47■□□□□ 0.55
CTDSP1-214ENST00000497677 FUT2Q10981 343 aa18.47■□□□□ 0.55
CTDSP1-214ENST00000497677 C1orf53Q5VUE5 145 aa18.47■□□□□ 0.55
CTDSP1-214ENST00000497677 RRP36Q96EU6 259 aaKnown RBP18.47■□□□□ 0.55
CTDSP1-214ENST00000497677 RMDN3Q96TC7 470 aa18.47■□□□□ 0.55
CTDSP1-214ENST00000497677 PRO3102Q9H379 93 aa18.47■□□□□ 0.55
CTDSP1-214ENST00000497677 ZMYND8Q9ULU4 1186 aaPredicted RBP18.47■□□□□ 0.55
CTDSP1-214ENST00000497677 Q9Y3F1 56 aa18.47■□□□□ 0.55
CTDSP1-214ENST00000497677 CEP290O15078 2479 aa18.47■□□□□ 0.55
CTDSP1-214ENST00000497677 LCTP09848 1927 aa18.47■□□□□ 0.55
CTDSP1-214ENST00000497677 A0A1W2PQ45 241 aaPredicted RBP18.46■□□□□ 0.55
CTDSP1-214ENST00000497677 A0A1W2PQY0 241 aa18.46■□□□□ 0.55
CTDSP1-214ENST00000497677 RPS6KB1P23443 525 aa18.46■□□□□ 0.55
CTDSP1-214ENST00000497677 HOXA13P31271 388 aaPredicted RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms