RNA–Protein interactions for RNA: ENST00000497448.1

TOM1-217, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-217ENST00000497448 NLRC5Q86WI3 1866 aa12.52□□□□□ -0.41
TOM1-217ENST00000497448 CACNA1AO00555 2505 aa12.52□□□□□ -0.41
TOM1-217ENST00000497448 C19orf67A6NJJ6 358 aa12.51□□□□□ -0.41
TOM1-217ENST00000497448 GOLIM4O00461 696 aa12.51□□□□□ -0.41
TOM1-217ENST00000497448 GJB5O95377 273 aa12.51□□□□□ -0.41
TOM1-217ENST00000497448 MYL3P08590 195 aa12.51□□□□□ -0.41
TOM1-217ENST00000497448 DUSP28Q4G0W2 176 aa12.51□□□□□ -0.41
TOM1-217ENST00000497448 MTG1Q9BT17 334 aaPredicted RBP12.51□□□□□ -0.41
TOM1-217ENST00000497448 VTA1Q9NP79 307 aa12.51□□□□□ -0.41
TOM1-217ENST00000497448 PRKAG3Q9UGI9 489 aa12.51□□□□□ -0.41
TOM1-217ENST00000497448 FEM1BQ9UK73 627 aa12.51□□□□□ -0.41
TOM1-217ENST00000497448 MYO15AQ9UKN7 3530 aa12.51□□□□□ -0.41
TOM1-217ENST00000497448 IRS1P35568 1242 aa12.5□□□□□ -0.41
TOM1-217ENST00000497448 CPT1AP50416 773 aa12.5□□□□□ -0.41
TOM1-217ENST00000497448 PTPN5P54829 565 aa12.5□□□□□ -0.41
TOM1-217ENST00000497448 BFSP2Q13515 415 aa12.5□□□□□ -0.41
TOM1-217ENST00000497448 GPNMBQ14956 572 aa12.5□□□□□ -0.41
TOM1-217ENST00000497448 TCTN1Q2MV58 587 aa12.5□□□□□ -0.41
TOM1-217ENST00000497448 LRRFIP1Q32MZ4 808 aaKnown RBP12.5□□□□□ -0.41
TOM1-217ENST00000497448 NBPF20Q3BBV1 942 aa12.5□□□□□ -0.41
TOM1-217ENST00000497448 CTR9Q6PD62 1173 aa12.5□□□□□ -0.41
TOM1-217ENST00000497448 KIAA1211Q6ZU35 1233 aa12.5□□□□□ -0.41
TOM1-217ENST00000497448 ADHFE1Q8IWW8 467 aa12.5□□□□□ -0.41
TOM1-217ENST00000497448 CLUAP1Q96AJ1 413 aa12.5□□□□□ -0.41
TOM1-217ENST00000497448 DNAJC2Q99543 621 aaKnown RBP12.5□□□□□ -0.41
TOM1-217ENST00000497448 MUTYHQ9UIF7 546 aa12.5□□□□□ -0.41
TOM1-217ENST00000497448 MICAL3Q7RTP6 2002 aa12.5□□□□□ -0.41
TOM1-217ENST00000497448 ZDBF2Q9HCK1 2354 aa12.5□□□□□ -0.41
TOM1-217ENST00000497448 RBAK-RBAKDNI3L0D1 243 aa12.49□□□□□ -0.41
TOM1-217ENST00000497448 CENPBP07199 599 aaPredicted RBP12.49□□□□□ -0.41
TOM1-217ENST00000497448 RASA1P20936 1047 aa12.49□□□□□ -0.41
TOM1-217ENST00000497448 ADD2P35612 726 aa12.49□□□□□ -0.41
TOM1-217ENST00000497448 FOXK2Q01167 660 aa12.49□□□□□ -0.41
TOM1-217ENST00000497448 TIGD5Q53EQ6 642 aa12.49□□□□□ -0.41
TOM1-217ENST00000497448 IER5LQ5T953 404 aa12.49□□□□□ -0.41
TOM1-217ENST00000497448 NFRKBQ6P4R8 1299 aa12.49□□□□□ -0.41
TOM1-217ENST00000497448 CNKSR3Q6P9H4 555 aa12.49□□□□□ -0.41
TOM1-217ENST00000497448 TMEM57Q8N5G2 664 aa12.49□□□□□ -0.41
TOM1-217ENST00000497448 FBXO22Q8NEZ5 403 aa12.49□□□□□ -0.41
TOM1-217ENST00000497448 MORC4Q8TE76 937 aa12.49□□□□□ -0.41
TOM1-217ENST00000497448 MRPL38Q96DV4 380 aaKnown RBP12.49□□□□□ -0.41
TOM1-217ENST00000497448 RAD9AQ99638 391 aa12.49□□□□□ -0.41
TOM1-217ENST00000497448 C17orf80Q9BSJ5 609 aa12.49□□□□□ -0.41
TOM1-217ENST00000497448 DCHS1Q96JQ0 3298 aa12.49□□□□□ -0.41
TOM1-217ENST00000497448 PLXNA3P51805 1871 aa12.48□□□□□ -0.41
TOM1-217ENST00000497448 RALGAPA2Q2PPJ7 1873 aa12.48□□□□□ -0.41
TOM1-217ENST00000497448 IGKV6D-41A0A0C4DH26 115 aa12.48□□□□□ -0.41
TOM1-217ENST00000497448 GFRA3O60609 400 aa12.48□□□□□ -0.41
TOM1-217ENST00000497448 CHGBP05060 677 aa12.48□□□□□ -0.41
TOM1-217ENST00000497448 PTPN11Q06124 597 aaPredicted RBP12.48□□□□□ -0.41
TOM1-217ENST00000497448 TCF15Q12870 199 aa12.48□□□□□ -0.41
TOM1-217ENST00000497448 COL19A1Q14993 1142 aa12.48□□□□□ -0.41
TOM1-217ENST00000497448 HERC4Q5GLZ8 1057 aaPredicted RBP12.48□□□□□ -0.41
TOM1-217ENST00000497448 LRRC47Q8N1G4 583 aaKnown RBP12.48□□□□□ -0.41
TOM1-217ENST00000497448 OR6J1Q8NGC5 347 aa12.48□□□□□ -0.41
TOM1-217ENST00000497448 CAGE1Q8TC20 777 aa12.48□□□□□ -0.41
TOM1-217ENST00000497448 AFAP1L1Q8TED9 768 aa12.48□□□□□ -0.41
TOM1-217ENST00000497448 PABPC5Q96DU9 382 aaKnown RBP12.48□□□□□ -0.41
TOM1-217ENST00000497448 TRERF1Q96PN7 1200 aa12.48□□□□□ -0.41
TOM1-217ENST00000497448 PURBQ96QR8 312 aaKnown RBP12.48□□□□□ -0.41
TOM1-217ENST00000497448 GPHNQ9NQX3 736 aaPredicted RBP12.48□□□□□ -0.41
TOM1-217ENST00000497448 CYP39A1Q9NYL5 469 aa12.48□□□□□ -0.41
TOM1-217ENST00000497448 ARPP21Q9UBL0 812 aaPredicted RBP12.48□□□□□ -0.41
TOM1-217ENST00000497448 CLIP2Q9UDT6 1046 aa12.48□□□□□ -0.41
TOM1-217ENST00000497448 NOD1Q9Y239 953 aa12.48□□□□□ -0.41
TOM1-217ENST00000497448 FAM50BQ9Y247 325 aa12.48□□□□□ -0.41
TOM1-217ENST00000497448 COL4A6Q14031 1691 aa12.48□□□□□ -0.41
TOM1-217ENST00000497448 CXCL10P02778 98 aa12.47□□□□□ -0.41
TOM1-217ENST00000497448 ALAS1P13196 640 aa12.47□□□□□ -0.41
TOM1-217ENST00000497448 TKFCQ3LXA3 575 aa12.47□□□□□ -0.41
TOM1-217ENST00000497448 TCEAL5Q5H9L2 206 aa12.47□□□□□ -0.41
TOM1-217ENST00000497448 MUM1L1Q5H9M0 696 aa12.47□□□□□ -0.41
TOM1-217ENST00000497448 FAM117BQ6P1L5 589 aa12.47□□□□□ -0.41
TOM1-217ENST00000497448 LRRC8DQ7L1W4 858 aa12.47□□□□□ -0.41
TOM1-217ENST00000497448 STK11IPQ8N1F8 1099 aa12.47□□□□□ -0.41
TOM1-217ENST00000497448 CCDC155Q8N6L0 562 aa12.47□□□□□ -0.41
TOM1-217ENST00000497448 GMCL1P1Q8NEA9 526 aa12.47□□□□□ -0.41
TOM1-217ENST00000497448 DDRGK1Q96HY6 314 aa12.47□□□□□ -0.41
TOM1-217ENST00000497448 CTAGE1Q96RT6 745 aa12.47□□□□□ -0.41
TOM1-217ENST00000497448 CRBNQ96SW2 442 aa12.47□□□□□ -0.41
TOM1-217ENST00000497448 WDR11Q9BZH6 1224 aa12.47□□□□□ -0.41
TOM1-217ENST00000497448 UPF3BQ9BZI7 483 aaKnown RBP12.47□□□□□ -0.41
TOM1-217ENST00000497448 IL1RAPL2Q9NP60 686 aa12.47□□□□□ -0.41
TOM1-217ENST00000497448 EXOC6BQ9Y2D4 811 aa12.47□□□□□ -0.41
TOM1-217ENST00000497448 SLC4A4Q9Y6R1 1079 aa12.47□□□□□ -0.41
TOM1-217ENST00000497448 IPO8O15397 1037 aaKnown RBP12.46□□□□□ -0.41
TOM1-217ENST00000497448 NBNO60934 754 aa12.46□□□□□ -0.41
TOM1-217ENST00000497448 FDX1P10109 184 aa12.46□□□□□ -0.41
TOM1-217ENST00000497448 BMP3P12645 472 aa12.46□□□□□ -0.41
TOM1-217ENST00000497448 SELPP16109 830 aa12.46□□□□□ -0.41
TOM1-217ENST00000497448 STAT2P52630 851 aa12.46□□□□□ -0.41
TOM1-217ENST00000497448 PTPROQ16827 1216 aa12.46□□□□□ -0.41
TOM1-217ENST00000497448 EP400NLQ6ZTU2 488 aa12.46□□□□□ -0.41
TOM1-217ENST00000497448 RPAP2Q8IXW5 612 aaPredicted RBP12.46□□□□□ -0.41
TOM1-217ENST00000497448 BANK1Q8NDB2 785 aa12.46□□□□□ -0.41
TOM1-217ENST00000497448 DHX38Q92620 1227 aaKnown RBP12.46□□□□□ -0.41
TOM1-217ENST00000497448 FRAT1Q92837 279 aaPredicted RBP12.46□□□□□ -0.41
TOM1-217ENST00000497448 CEP95Q96GE4 821 aa12.46□□□□□ -0.41
TOM1-217ENST00000497448 FAM86C1Q9NVL1 165 aa12.46□□□□□ -0.41
TOM1-217ENST00000497448 CTNNA3Q9UI47 895 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms