RNA–Protein interactions for RNA: ENST00000497107.1

ITGA6-211, Transcript of integrin subunit alpha 6, humanhuman

TSL 2

Gene ITGA6, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-211ENST00000497107 AKAP2Q9Y2D5 859 aa7.4□□□□□ -1.22
ITGA6-211ENST00000497107 SPATA31A5Q5VU36 1347 aa7.4□□□□□ -1.22
ITGA6-211ENST00000497107 SPATA31A7Q8IWB4 1347 aa7.4□□□□□ -1.22
ITGA6-211ENST00000497107 CDHR2Q9BYE9 1310 aa7.4□□□□□ -1.22
ITGA6-211ENST00000497107 RFX7Q2KHR2 1363 aa7.4□□□□□ -1.22
ITGA6-211ENST00000497107 WNK3Q9BYP7 1800 aa7.39□□□□□ -1.23
ITGA6-211ENST00000497107 CCDC171Q6TFL3 1326 aa7.39□□□□□ -1.23
ITGA6-211ENST00000497107 PAX4O43316 350 aa7.39□□□□□ -1.23
ITGA6-211ENST00000497107 COBLO75128 1261 aa7.39□□□□□ -1.23
ITGA6-211ENST00000497107 CSF1RP07333 972 aa7.39□□□□□ -1.23
ITGA6-211ENST00000497107 MAOBP27338 520 aa7.39□□□□□ -1.23
ITGA6-211ENST00000497107 GNA15P30679 374 aa7.39□□□□□ -1.23
ITGA6-211ENST00000497107 PTH1RQ03431 593 aa7.39□□□□□ -1.23
ITGA6-211ENST00000497107 TAF7LQ5H9L4 462 aa7.39□□□□□ -1.23
ITGA6-211ENST00000497107 EXOSC6Q5RKV6 272 aaKnown RBP7.39□□□□□ -1.23
ITGA6-211ENST00000497107 FBXO33Q7Z6M2 555 aa7.39□□□□□ -1.23
ITGA6-211ENST00000497107 SMG8Q8ND04 991 aaKnown RBP7.39□□□□□ -1.23
ITGA6-211ENST00000497107 C3orf58Q8NDZ4 430 aa7.39□□□□□ -1.23
ITGA6-211ENST00000497107 MAP4K1Q92918 833 aa7.39□□□□□ -1.23
ITGA6-211ENST00000497107 SMARCC1Q92922 1105 aaPredicted RBP7.39□□□□□ -1.23
ITGA6-211ENST00000497107 HAUS7Q99871 368 aa7.39□□□□□ -1.23
ITGA6-211ENST00000497107 TMPRSS13Q9BYE2 586 aa7.39□□□□□ -1.23
ITGA6-211ENST00000497107 TMEM39AQ9NV64 488 aa7.39□□□□□ -1.23
ITGA6-211ENST00000497107 GPN3Q9UHW5 284 aaPredicted RBP7.39□□□□□ -1.23
ITGA6-211ENST00000497107 TJP1Q07157 1748 aa7.38□□□□□ -1.23
ITGA6-211ENST00000497107 YBX3P16989 372 aaKnown RBP eCLIP7.38□□□□□ -1.23
ITGA6-211ENST00000497107 VAMP1P23763 118 aa7.38□□□□□ -1.23
ITGA6-211ENST00000497107 PSMA5P28066 241 aa7.38□□□□□ -1.23
ITGA6-211ENST00000497107 TXKP42681 527 aa7.38□□□□□ -1.23
ITGA6-211ENST00000497107 FAAP100Q0VG06 881 aa7.38□□□□□ -1.23
ITGA6-211ENST00000497107 IFIT5Q13325 482 aaKnown RBP7.38□□□□□ -1.23
ITGA6-211ENST00000497107 NECTIN1Q15223 517 aa7.38□□□□□ -1.23
ITGA6-211ENST00000497107 LRRFIP1Q32MZ4 808 aaKnown RBP7.38□□□□□ -1.23
ITGA6-211ENST00000497107 NLRP10Q86W26 655 aa7.38□□□□□ -1.23
ITGA6-211ENST00000497107 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.38□□□□□ -1.23
ITGA6-211ENST00000497107 UTP4Q969X6 686 aaKnown RBP7.38□□□□□ -1.23
ITGA6-211ENST00000497107 FAM89AQ96GI7 184 aa7.38□□□□□ -1.23
ITGA6-211ENST00000497107 FAM46AQ96IP4 442 aaKnown RBP7.38□□□□□ -1.23
ITGA6-211ENST00000497107 ZSCAN31Q96LW9 406 aaPredicted RBP7.38□□□□□ -1.23
ITGA6-211ENST00000497107 FAM227BQ96M60 508 aa7.38□□□□□ -1.23
ITGA6-211ENST00000497107 UBL7Q96S82 380 aaPredicted RBP7.38□□□□□ -1.23
ITGA6-211ENST00000497107 DNAJC2Q99543 621 aaKnown RBP7.38□□□□□ -1.23
ITGA6-211ENST00000497107 TRIM56Q9BRZ2 755 aaKnown RBP7.38□□□□□ -1.23
ITGA6-211ENST00000497107 OSBPL7Q9BZF2 842 aa7.38□□□□□ -1.23
ITGA6-211ENST00000497107 UPF3BQ9BZI7 483 aaKnown RBP7.38□□□□□ -1.23
ITGA6-211ENST00000497107 CEP44Q9C0F1 390 aa7.38□□□□□ -1.23
ITGA6-211ENST00000497107 LIMCH1Q9UPQ0 1083 aa7.38□□□□□ -1.23
ITGA6-211ENST00000497107 ZBTB1Q9Y2K1 713 aa7.38□□□□□ -1.23
ITGA6-211ENST00000497107 HIF3AQ9Y2N7 669 aa7.38□□□□□ -1.23
ITGA6-211ENST00000497107 RBM8AQ9Y5S9 174 aaKnown RBP7.38□□□□□ -1.23
ITGA6-211ENST00000497107 CYP46A1Q9Y6A2 500 aa7.38□□□□□ -1.23
ITGA6-211ENST00000497107 NRAPQ86VF7 1730 aa7.38□□□□□ -1.23
ITGA6-211ENST00000497107 SLIT2O94813 1529 aa7.37□□□□□ -1.23
ITGA6-211ENST00000497107 A0A0D9SFI3 127 aa7.37□□□□□ -1.23
ITGA6-211ENST00000497107 A0A1B0GUL7 405 aa7.37□□□□□ -1.23
ITGA6-211ENST00000497107 ANKRD18BA2A2Z9 1011 aa7.37□□□□□ -1.23
ITGA6-211ENST00000497107 IRS4O14654 1257 aaPredicted RBP7.37□□□□□ -1.23
ITGA6-211ENST00000497107 DHX15O43143 795 aaKnown RBP7.37□□□□□ -1.23
ITGA6-211ENST00000497107 PDE8AO60658 829 aa7.37□□□□□ -1.23
ITGA6-211ENST00000497107 BAG4O95429 457 aaKnown RBP7.37□□□□□ -1.23
ITGA6-211ENST00000497107 IFIT1P09914 478 aaKnown RBP7.37□□□□□ -1.23
ITGA6-211ENST00000497107 HSP90B1P14625 803 aaKnown RBP7.37□□□□□ -1.23
ITGA6-211ENST00000497107 EIF4BP23588 611 aaKnown RBP7.37□□□□□ -1.23
ITGA6-211ENST00000497107 GPTP24298 496 aa7.37□□□□□ -1.23
ITGA6-211ENST00000497107 EIF5P55010 431 aaKnown RBP7.37□□□□□ -1.23
ITGA6-211ENST00000497107 TIMM10P62072 90 aa7.37□□□□□ -1.23
ITGA6-211ENST00000497107 HLFQ16534 295 aa7.37□□□□□ -1.23
ITGA6-211ENST00000497107 MCMDC2Q4G0Z9 681 aa7.37□□□□□ -1.23
ITGA6-211ENST00000497107 LRRC24Q50LG9 513 aa7.37□□□□□ -1.23
ITGA6-211ENST00000497107 CCDC158Q5M9N0 1113 aa7.37□□□□□ -1.23
ITGA6-211ENST00000497107 L1TD1Q5T7N2 865 aaKnown RBP7.37□□□□□ -1.23
ITGA6-211ENST00000497107 GORABQ5T7V8 394 aa7.37□□□□□ -1.23
ITGA6-211ENST00000497107 CREB3L3Q68CJ9 461 aa7.37□□□□□ -1.23
ITGA6-211ENST00000497107 PRR23CQ6ZRP0 262 aa7.37□□□□□ -1.23
ITGA6-211ENST00000497107 ZNF34Q8IZ26 560 aa7.37□□□□□ -1.23
ITGA6-211ENST00000497107 ZGPATQ8N5A5 531 aaKnown RBP7.37□□□□□ -1.23
ITGA6-211ENST00000497107 MARCH10Q8NA82 808 aaPredicted RBP7.37□□□□□ -1.23
ITGA6-211ENST00000497107 KBTBD3Q8NAB2 608 aa7.37□□□□□ -1.23
ITGA6-211ENST00000497107 ACSBG1Q96GR2 724 aa7.37□□□□□ -1.23
ITGA6-211ENST00000497107 JAKMIP1Q96N16 626 aaKnown RBP7.37□□□□□ -1.23
ITGA6-211ENST00000497107 TTC14Q96N46 770 aa7.37□□□□□ -1.23
ITGA6-211ENST00000497107 PDRG1Q9NUG6 133 aa7.37□□□□□ -1.23
ITGA6-211ENST00000497107 HMG20BQ9P0W2 317 aa7.37□□□□□ -1.23
ITGA6-211ENST00000497107 TRMT112Q9UI30 125 aaKnown RBP7.37□□□□□ -1.23
ITGA6-211ENST00000497107 NWD2Q9ULI1 1742 aa7.37□□□□□ -1.23
ITGA6-211ENST00000497107 MED23Q9ULK4 1368 aa7.36□□□□□ -1.23
ITGA6-211ENST00000497107 DOT1LQ8TEK3 1739 aa7.36□□□□□ -1.23
ITGA6-211ENST00000497107 SLC27A2O14975 620 aa7.36□□□□□ -1.23
ITGA6-211ENST00000497107 GAS2O43903 313 aaKnown RBP7.36□□□□□ -1.23
ITGA6-211ENST00000497107 TAF5LO75529 589 aa7.36□□□□□ -1.23
ITGA6-211ENST00000497107 CASTP20810 708 aaKnown RBP7.36□□□□□ -1.23
ITGA6-211ENST00000497107 AK2P54819 239 aa7.36□□□□□ -1.23
ITGA6-211ENST00000497107 CTSWP56202 376 aa7.36□□□□□ -1.23
ITGA6-211ENST00000497107 KRT32Q14532 448 aa7.36□□□□□ -1.23
ITGA6-211ENST00000497107 ANKRD1Q15327 319 aa7.36□□□□□ -1.23
ITGA6-211ENST00000497107 TTC39AQ5SRH9 613 aa7.36□□□□□ -1.23
ITGA6-211ENST00000497107 VPS53Q5VIR6 699 aa7.36□□□□□ -1.23
ITGA6-211ENST00000497107 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.36□□□□□ -1.23
ITGA6-211ENST00000497107 NOL8Q76FK4 1167 aaKnown RBP7.36□□□□□ -1.23
ITGA6-211ENST00000497107 RUFY3Q7L099 469 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms