RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 VIPR1P32241 457 aa6.83□□□□□ -1.32
TRIM4-205ENST00000496896 MAPKAPK2P49137 400 aa6.83□□□□□ -1.32
TRIM4-205ENST00000496896 LINC00310P59036 64 aa6.83□□□□□ -1.32
TRIM4-205ENST00000496896 PAQR3Q6TCH7 311 aa6.83□□□□□ -1.32
TRIM4-205ENST00000496896 MRGPRX3Q96LB0 322 aa6.83□□□□□ -1.32
TRIM4-205ENST00000496896 EPN3Q9H201 632 aa6.83□□□□□ -1.32
TRIM4-205ENST00000496896 CYP26B1Q9NR63 512 aa6.83□□□□□ -1.32
TRIM4-205ENST00000496896 SIRT5Q9NXA8 310 aa6.83□□□□□ -1.32
TRIM4-205ENST00000496896 NUAK1O60285 661 aa6.82□□□□□ -1.32
TRIM4-205ENST00000496896 MSL3P1P0C860 447 aa6.82□□□□□ -1.32
TRIM4-205ENST00000496896 PAMP19021 973 aa6.82□□□□□ -1.32
TRIM4-205ENST00000496896 DNAJA1P31689 397 aaKnown RBP6.82□□□□□ -1.32
TRIM4-205ENST00000496896 ZC3H6P61129 1189 aaKnown RBP6.82□□□□□ -1.32
TRIM4-205ENST00000496896 RAB3GAP1Q15042 981 aa6.82□□□□□ -1.32
TRIM4-205ENST00000496896 DPY19L1Q2PZI1 675 aa6.82□□□□□ -1.32
TRIM4-205ENST00000496896 LARP1BQ659C4 914 aaKnown RBP6.82□□□□□ -1.32
TRIM4-205ENST00000496896 NKX2-4Q9H2Z4 354 aa6.82□□□□□ -1.32
TRIM4-205ENST00000496896 NPHP3-ACAD11A0A0J9YXS1 232 aa6.81□□□□□ -1.32
TRIM4-205ENST00000496896 N4BP3O15049 544 aa6.81□□□□□ -1.32
TRIM4-205ENST00000496896 SUSD5O60279 629 aa6.81□□□□□ -1.32
TRIM4-205ENST00000496896 KCNH1O95259 989 aa6.81□□□□□ -1.32
TRIM4-205ENST00000496896 DBHP09172 617 aa6.81□□□□□ -1.32
TRIM4-205ENST00000496896 GTF2IRD2BQ6EKJ0 949 aa6.81□□□□□ -1.32
TRIM4-205ENST00000496896 RPTNQ6XPR3 784 aa6.81□□□□□ -1.32
TRIM4-205ENST00000496896 GTF2IRD2Q86UP8 949 aa6.81□□□□□ -1.32
TRIM4-205ENST00000496896 MMP19Q99542 508 aa6.81□□□□□ -1.32
TRIM4-205ENST00000496896 CNTD2Q9H8S5 307 aa6.81□□□□□ -1.32
TRIM4-205ENST00000496896 PARD6AQ9NPB6 346 aa6.81□□□□□ -1.32
TRIM4-205ENST00000496896 A0A1W2PQJ5 194 aa6.8□□□□□ -1.32
TRIM4-205ENST00000496896 FOXD2O60548 495 aaPredicted RBP6.8□□□□□ -1.32
TRIM4-205ENST00000496896 DDAH1O94760 285 aa6.8□□□□□ -1.32
TRIM4-205ENST00000496896 SDHBP21912 280 aa6.8□□□□□ -1.32
TRIM4-205ENST00000496896 PLEKHN1Q494U1 663 aaPredicted RBP6.8□□□□□ -1.32
TRIM4-205ENST00000496896 EEPD1Q7L9B9 569 aa6.8□□□□□ -1.32
TRIM4-205ENST00000496896 SIGLEC10Q96LC7 697 aa6.8□□□□□ -1.32
TRIM4-205ENST00000496896 CCDC140Q96MF4 163 aa6.8□□□□□ -1.32
TRIM4-205ENST00000496896 IRS2Q9Y4H2 1338 aa6.79□□□□□ -1.32
TRIM4-205ENST00000496896 NUDT19A8MXV4 375 aa6.79□□□□□ -1.32
TRIM4-205ENST00000496896 RFXAPO00287 272 aa6.79□□□□□ -1.32
TRIM4-205ENST00000496896 IRS4O14654 1257 aaPredicted RBP6.79□□□□□ -1.32
TRIM4-205ENST00000496896 SCG5P05408 212 aa6.79□□□□□ -1.32
TRIM4-205ENST00000496896 GLI4P10075 376 aa6.79□□□□□ -1.32
TRIM4-205ENST00000496896 HOXC12P31275 282 aa6.79□□□□□ -1.32
TRIM4-205ENST00000496896 SCRN1Q12765 414 aa6.79□□□□□ -1.32
TRIM4-205ENST00000496896 TESK1Q15569 626 aa6.79□□□□□ -1.32
TRIM4-205ENST00000496896 BICRALQ6AI39 1079 aa6.79□□□□□ -1.32
TRIM4-205ENST00000496896 MRM1Q6IN84 353 aaKnown RBP6.79□□□□□ -1.32
TRIM4-205ENST00000496896 IQCEQ6IPM2 695 aa6.79□□□□□ -1.32
TRIM4-205ENST00000496896 ZC3H14Q6PJT7 736 aaKnown RBP6.79□□□□□ -1.32
TRIM4-205ENST00000496896 TMC6Q7Z403 805 aa6.79□□□□□ -1.32
TRIM4-205ENST00000496896 MICAL1Q8TDZ2 1067 aa6.79□□□□□ -1.32
TRIM4-205ENST00000496896 MZB1Q8WU39 189 aa6.79□□□□□ -1.32
TRIM4-205ENST00000496896 SGPP1Q9BX95 441 aa6.79□□□□□ -1.32
TRIM4-205ENST00000496896 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.79□□□□□ -1.32
TRIM4-205ENST00000496896 R3HCC1Q9Y3T6 440 aaKnown RBP6.79□□□□□ -1.32
TRIM4-205ENST00000496896 B2RBV5 119 aa6.78□□□□□ -1.32
TRIM4-205ENST00000496896 KLF4O43474 513 aa6.78□□□□□ -1.32
TRIM4-205ENST00000496896 GJB6O95452 261 aa6.78□□□□□ -1.32
TRIM4-205ENST00000496896 ZNF385BQ569K4 471 aa6.78□□□□□ -1.32
TRIM4-205ENST00000496896 E4F1Q66K89 784 aaPredicted RBP6.78□□□□□ -1.32
TRIM4-205ENST00000496896 CABP7Q86V35 215 aa6.78□□□□□ -1.32
TRIM4-205ENST00000496896 LDHDQ86WU2 507 aa6.78□□□□□ -1.32
TRIM4-205ENST00000496896 ZNF227Q86WZ6 799 aa6.78□□□□□ -1.32
TRIM4-205ENST00000496896 LZTR1Q8N653 840 aa6.78□□□□□ -1.32
TRIM4-205ENST00000496896 NETO2Q8NC67 525 aa6.78□□□□□ -1.32
TRIM4-205ENST00000496896 MTA3Q9BTC8 594 aa6.78□□□□□ -1.32
TRIM4-205ENST00000496896 CNOT6Q9ULM6 557 aaKnown RBP6.78□□□□□ -1.32
TRIM4-205ENST00000496896 IRAK3Q9Y616 596 aa6.78□□□□□ -1.32
TRIM4-205ENST00000496896 C7orf72A4D263 438 aa6.77□□□□□ -1.33
TRIM4-205ENST00000496896 NPHS1O60500 1241 aa6.77□□□□□ -1.33
TRIM4-205ENST00000496896 CPP00450 1065 aa6.77□□□□□ -1.33
TRIM4-205ENST00000496896 CAPNS1P04632 268 aa6.77□□□□□ -1.33
TRIM4-205ENST00000496896 ITGAVP06756 1048 aa6.77□□□□□ -1.33
TRIM4-205ENST00000496896 THBDP07204 575 aa6.77□□□□□ -1.33
TRIM4-205ENST00000496896 PLS3P13797 630 aa6.77□□□□□ -1.33
TRIM4-205ENST00000496896 SYN1P17600 705 aa6.77□□□□□ -1.33
TRIM4-205ENST00000496896 CDR1P51861 262 aa6.77□□□□□ -1.33
TRIM4-205ENST00000496896 DDR2Q16832 855 aa6.77□□□□□ -1.33
TRIM4-205ENST00000496896 SV2CQ496J9 727 aa6.77□□□□□ -1.33
TRIM4-205ENST00000496896 ANKS3Q6ZW76 656 aa6.77□□□□□ -1.33
TRIM4-205ENST00000496896 TMEM151BQ8IW70 566 aa6.77□□□□□ -1.33
TRIM4-205ENST00000496896 NPLOC4Q8TAT6 608 aa6.77□□□□□ -1.33
TRIM4-205ENST00000496896 C8orf37Q96NL8 207 aa6.77□□□□□ -1.33
TRIM4-205ENST00000496896 ZCCHC4Q9H5U6 513 aa6.77□□□□□ -1.33
TRIM4-205ENST00000496896 KCTD3Q9Y597 815 aa6.77□□□□□ -1.33
TRIM4-205ENST00000496896 PCDHA5Q9Y5H7 936 aa6.77□□□□□ -1.33
TRIM4-205ENST00000496896 A0A0G2JLL6 359 aaPredicted RBP6.76□□□□□ -1.33
TRIM4-205ENST00000496896 AGRPO00253 132 aa6.76□□□□□ -1.33
TRIM4-205ENST00000496896 FBLN1P23142 703 aa6.76□□□□□ -1.33
TRIM4-205ENST00000496896 EPHB3P54753 998 aa6.76□□□□□ -1.33
TRIM4-205ENST00000496896 CYP4F3Q08477 520 aa6.76□□□□□ -1.33
TRIM4-205ENST00000496896 ACBD5Q5T8D3 534 aaPredicted RBP6.76□□□□□ -1.33
TRIM4-205ENST00000496896 CPNE8Q86YQ8 564 aa6.76□□□□□ -1.33
TRIM4-205ENST00000496896 IGDCC3Q8IVU1 814 aa6.76□□□□□ -1.33
TRIM4-205ENST00000496896 FRS2Q8WU20 508 aa6.76□□□□□ -1.33
TRIM4-205ENST00000496896 BTN2A2Q8WVV5 523 aa6.76□□□□□ -1.33
TRIM4-205ENST00000496896 HNRNPLLQ8WVV9 542 aaKnown RBP6.76□□□□□ -1.33
TRIM4-205ENST00000496896 PPP1R14AQ96A00 147 aa6.76□□□□□ -1.33
TRIM4-205ENST00000496896 TSPAN17Q96FV3 270 aa6.76□□□□□ -1.33
TRIM4-205ENST00000496896 RNF38Q9H0F5 515 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms