RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 MYOCOSA0A1B0GUC4 107 aa7.52□□□□□ -1.21
SNX13-211ENST00000496855 CCDC85CA6NKD9 419 aa7.52□□□□□ -1.21
SNX13-211ENST00000496855 TACR1P25103 407 aa7.52□□□□□ -1.21
SNX13-211ENST00000496855 YBX1P67809 324 aaKnown RBP7.52□□□□□ -1.21
SNX13-211ENST00000496855 HSP90AA2PQ14568 343 aaPredicted RBP7.52□□□□□ -1.21
SNX13-211ENST00000496855 RAB3GAP1Q15042 981 aa7.52□□□□□ -1.21
SNX13-211ENST00000496855 PRSS53Q2L4Q9 553 aa7.52□□□□□ -1.21
SNX13-211ENST00000496855 SOGA3Q5TF21 947 aa7.52□□□□□ -1.21
SNX13-211ENST00000496855 E4F1Q66K89 784 aaPredicted RBP7.52□□□□□ -1.21
SNX13-211ENST00000496855 BICRALQ6AI39 1079 aa7.52□□□□□ -1.21
SNX13-211ENST00000496855 IQCEQ6IPM2 695 aa7.52□□□□□ -1.21
SNX13-211ENST00000496855 KREMEN2Q8NCW0 462 aa7.52□□□□□ -1.21
SNX13-211ENST00000496855 BHLHE22Q8NFJ8 381 aaPredicted RBP7.52□□□□□ -1.21
SNX13-211ENST00000496855 PPP1R16BQ96T49 567 aa7.52□□□□□ -1.21
SNX13-211ENST00000496855 GOLGA2P5Q9HBQ8 144 aa7.52□□□□□ -1.21
SNX13-211ENST00000496855 NUDT19A8MXV4 375 aa7.51□□□□□ -1.21
SNX13-211ENST00000496855 ABLIM1O14639 778 aa7.51□□□□□ -1.21
SNX13-211ENST00000496855 NPHS1O60500 1241 aa7.51□□□□□ -1.21
SNX13-211ENST00000496855 PPP1R11O60927 126 aaPredicted RBP7.51□□□□□ -1.21
SNX13-211ENST00000496855 RBM10P98175 930 aaKnown RBP7.51□□□□□ -1.21
SNX13-211ENST00000496855 PKN1Q16512 942 aa7.51□□□□□ -1.21
SNX13-211ENST00000496855 INF2Q27J81 1249 aa7.51□□□□□ -1.21
SNX13-211ENST00000496855 LRRC47Q8N1G4 583 aaKnown RBP7.51□□□□□ -1.21
SNX13-211ENST00000496855 LZTR1Q8N653 840 aa7.51□□□□□ -1.21
SNX13-211ENST00000496855 TMEM145Q8NBT3 493 aa7.51□□□□□ -1.21
SNX13-211ENST00000496855 KRTAP9-2Q9BYQ4 174 aa7.51□□□□□ -1.21
SNX13-211ENST00000496855 KLHL14Q9P2G3 628 aa7.51□□□□□ -1.21
SNX13-211ENST00000496855 GULP1Q9UBP9 304 aa7.51□□□□□ -1.21
SNX13-211ENST00000496855 TMEFF2Q9UIK5 374 aaPredicted RBP7.51□□□□□ -1.21
SNX13-211ENST00000496855 RWDD3Q9Y3V2 267 aa7.51□□□□□ -1.21
SNX13-211ENST00000496855 ARNTLO00327 626 aa7.5□□□□□ -1.21
SNX13-211ENST00000496855 SRGAP3O43295 1099 aa7.5□□□□□ -1.21
SNX13-211ENST00000496855 DBHP09172 617 aa7.5□□□□□ -1.21
SNX13-211ENST00000496855 SRSF3P84103 164 aaKnown RBP7.5□□□□□ -1.21
SNX13-211ENST00000496855 TMEM62Q0P6H9 643 aa7.5□□□□□ -1.21
SNX13-211ENST00000496855 CBX2Q14781 532 aaPredicted RBP7.5□□□□□ -1.21
SNX13-211ENST00000496855 MTERF2Q49AM1 385 aa7.5□□□□□ -1.21
SNX13-211ENST00000496855 ACBD5Q5T8D3 534 aaPredicted RBP7.5□□□□□ -1.21
SNX13-211ENST00000496855 SPATC1Q76KD6 591 aa7.5□□□□□ -1.21
SNX13-211ENST00000496855 CCDC103Q8IW40 242 aa7.5□□□□□ -1.21
SNX13-211ENST00000496855 KCNN1Q92952 543 aa7.5□□□□□ -1.21
SNX13-211ENST00000496855 C1orf159Q96HA4 380 aa7.5□□□□□ -1.21
SNX13-211ENST00000496855 MTA3Q9BTC8 594 aa7.5□□□□□ -1.21
SNX13-211ENST00000496855 AARSD1Q9BTE6 412 aaKnown RBP7.5□□□□□ -1.21
SNX13-211ENST00000496855 IER2Q9BTL4 223 aa7.5□□□□□ -1.21
SNX13-211ENST00000496855 ARHGEF4Q9NR80 690 aa7.5□□□□□ -1.21
SNX13-211ENST00000496855 TEX51A0A1B0GUA7 166 aa7.49□□□□□ -1.21
SNX13-211ENST00000496855 MEFVO15553 781 aaPredicted RBP7.49□□□□□ -1.21
SNX13-211ENST00000496855 SEMA7AO75326 666 aa7.49□□□□□ -1.21
SNX13-211ENST00000496855 CYBBP04839 570 aa7.49□□□□□ -1.21
SNX13-211ENST00000496855 VIPR1P32241 457 aa7.49□□□□□ -1.21
SNX13-211ENST00000496855 MAP4K2Q12851 820 aa7.49□□□□□ -1.21
SNX13-211ENST00000496855 KCNAB2Q13303 367 aa7.49□□□□□ -1.21
SNX13-211ENST00000496855 RASA3Q14644 834 aa7.49□□□□□ -1.21
SNX13-211ENST00000496855 NR1I3Q14994 352 aa7.49□□□□□ -1.21
SNX13-211ENST00000496855 TESK1Q15569 626 aa7.49□□□□□ -1.21
SNX13-211ENST00000496855 ZNF124Q15973 351 aa7.49□□□□□ -1.21
SNX13-211ENST00000496855 SLC35F1Q5T1Q4 408 aa7.49□□□□□ -1.21
SNX13-211ENST00000496855 OLFML2BQ68BL8 750 aa7.49□□□□□ -1.21
SNX13-211ENST00000496855 TMEM132EQ6IEE7 984 aa7.49□□□□□ -1.21
SNX13-211ENST00000496855 DENND5AQ6IQ26 1287 aa7.49□□□□□ -1.21
SNX13-211ENST00000496855 PAQR3Q6TCH7 311 aa7.49□□□□□ -1.21
SNX13-211ENST00000496855 RPTNQ6XPR3 784 aa7.49□□□□□ -1.21
SNX13-211ENST00000496855 LRP10Q7Z4F1 713 aa7.49□□□□□ -1.21
SNX13-211ENST00000496855 PPIL6Q8IXY8 311 aa7.49□□□□□ -1.21
SNX13-211ENST00000496855 PMFBP1Q8TBY8 1022 aa7.49□□□□□ -1.21
SNX13-211ENST00000496855 KCTD13Q8WZ19 329 aa7.49□□□□□ -1.21
SNX13-211ENST00000496855 DIO2Q92813 273 aa7.49□□□□□ -1.21
SNX13-211ENST00000496855 DNAJC2Q99543 621 aaKnown RBP7.49□□□□□ -1.21
SNX13-211ENST00000496855 FBLN5Q9UBX5 448 aa7.49□□□□□ -1.21
SNX13-211ENST00000496855 ETV2O00321 342 aaPredicted RBP7.49□□□□□ -1.21
SNX13-211ENST00000496855 TSPAN15O95858 294 aa7.49□□□□□ -1.21
SNX13-211ENST00000496855 KRT1P04264 644 aa7.49□□□□□ -1.21
SNX13-211ENST00000496855 TMEM253P0C7T8 217 aa7.49□□□□□ -1.21
SNX13-211ENST00000496855 GLDCP23378 1020 aa7.49□□□□□ -1.21
SNX13-211ENST00000496855 DPF3Q92784 378 aa7.49□□□□□ -1.21
SNX13-211ENST00000496855 DRC1Q96MC2 740 aa7.49□□□□□ -1.21
SNX13-211ENST00000496855 DEPDC7Q96QD5 511 aa7.49□□□□□ -1.21
SNX13-211ENST00000496855 KRTAP4-12Q9BQ66 201 aa7.49□□□□□ -1.21
SNX13-211ENST00000496855 SPATA9Q9BWV2 254 aa7.49□□□□□ -1.21
SNX13-211ENST00000496855 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.49□□□□□ -1.212e-7■■□□□ 13.4
SNX13-211ENST00000496855 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.48□□□□□ -1.21
SNX13-211ENST00000496855 NFIBO00712 420 aa7.48□□□□□ -1.21
SNX13-211ENST00000496855 DLX3O60479 287 aa7.48□□□□□ -1.21
SNX13-211ENST00000496855 MED14OSP0DP75 135 aa7.48□□□□□ -1.21
SNX13-211ENST00000496855 GLI4P10075 376 aa7.48□□□□□ -1.21
SNX13-211ENST00000496855 FGFR1P11362 822 aa7.48□□□□□ -1.21
SNX13-211ENST00000496855 MAPKAPK2P49137 400 aa7.48□□□□□ -1.21
SNX13-211ENST00000496855 CABP7Q86V35 215 aa7.48□□□□□ -1.21
SNX13-211ENST00000496855 MKL1Q969V6 931 aa7.48□□□□□ -1.21
SNX13-211ENST00000496855 SIRT5Q9NXA8 310 aa7.48□□□□□ -1.21
SNX13-211ENST00000496855 SNTG2Q9NY99 539 aa7.48□□□□□ -1.21
SNX13-211ENST00000496855 PFDN2Q9UHV9 154 aa7.48□□□□□ -1.21
SNX13-211ENST00000496855 MBD1Q9UIS9 605 aaPredicted RBP7.48□□□□□ -1.21
SNX13-211ENST00000496855 TRAV20A0A0B4J274 112 aa7.47□□□□□ -1.21
SNX13-211ENST00000496855 PRODHO43272 600 aa7.47□□□□□ -1.21
SNX13-211ENST00000496855 C1QTNF9P0C862 333 aa7.47□□□□□ -1.21
SNX13-211ENST00000496855 LTBRP36941 435 aa7.47□□□□□ -1.21
SNX13-211ENST00000496855 DLG4P78352 724 aa7.47□□□□□ -1.21
SNX13-211ENST00000496855 SSRP1Q08945 709 aaKnown RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms