RNA–Protein interactions for RNA: ENST00000496527.1

CHRD-217, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 588 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-217ENST00000496527 ACVR2BQ13705 512 aa26.32■■□□□ 1.8
CHRD-217ENST00000496527 RTN1Q16799 776 aa26.32■■□□□ 1.8
CHRD-217ENST00000496527 ANO1Q5XXA6 986 aa26.32■■□□□ 1.8
CHRD-217ENST00000496527 TMTC3Q6ZXV5 915 aa26.32■■□□□ 1.8
CHRD-217ENST00000496527 UBE2Q1Q7Z7E8 422 aa26.32■■□□□ 1.8
CHRD-217ENST00000496527 CMTR1Q8N1G2 835 aaKnown RBP26.32■■□□□ 1.8
CHRD-217ENST00000496527 FBXL16Q8N461 479 aa26.32■■□□□ 1.8
CHRD-217ENST00000496527 ASTN1O14525 1302 aa26.32■■□□□ 1.8
CHRD-217ENST00000496527 GOLGA8AA7E2F4 631 aa26.31■■□□□ 1.8
CHRD-217ENST00000496527 GOLGA8BA8MQT2 603 aa26.31■■□□□ 1.8
CHRD-217ENST00000496527 ALDH5A1P51649 535 aaPredicted RBP26.31■■□□□ 1.8
CHRD-217ENST00000496527 RCAN1P53805 252 aa26.31■■□□□ 1.8
CHRD-217ENST00000496527 CCDC82Q8N4S0 544 aa26.31■■□□□ 1.8
CHRD-217ENST00000496527 TBC1D5Q92609 795 aa26.31■■□□□ 1.8
CHRD-217ENST00000496527 FAM184BQ9ULE4 1060 aa26.31■■□□□ 1.8
CHRD-217ENST00000496527 LOC102724159A0A0B4J2E5 919 aa26.3■■□□□ 1.8
CHRD-217ENST00000496527 RARBP10826 455 aa26.3■■□□□ 1.8
CHRD-217ENST00000496527 PWP2Q15269 919 aaKnown RBP26.3■■□□□ 1.8
CHRD-217ENST00000496527 NECAB2Q7Z6G3 386 aa26.3■■□□□ 1.8
CHRD-217ENST00000496527 DNERQ8NFT8 737 aa26.3■■□□□ 1.8
CHRD-217ENST00000496527 PAWRQ96IZ0 340 aaKnown RBP26.3■■□□□ 1.8
CHRD-217ENST00000496527 MPHOSPH6Q99547 160 aaKnown RBP26.3■■□□□ 1.8
CHRD-217ENST00000496527 AGXT2Q9BYV1 514 aa26.3■■□□□ 1.8
CHRD-217ENST00000496527 CFBP00751 764 aa26.29■■□□□ 1.8
CHRD-217ENST00000496527 ANAPC15P60006 121 aa26.29■■□□□ 1.8
CHRD-217ENST00000496527 SYTL5Q8TDW5 730 aaPredicted RBP26.29■■□□□ 1.8
CHRD-217ENST00000496527 DIS3LQ8TF46 1054 aaKnown RBP26.29■■□□□ 1.8
CHRD-217ENST00000496527 B4DLN1 442 aa26.28■■□□□ 1.8
CHRD-217ENST00000496527 METAP2P50579 478 aaKnown RBP eCLIP26.28■■□□□ 1.8
CHRD-217ENST00000496527 MRPL12P52815 198 aaKnown RBP26.28■■□□□ 1.8
CHRD-217ENST00000496527 PPP2R5BQ15173 497 aa26.28■■□□□ 1.8
CHRD-217ENST00000496527 ARRDC4Q8NCT1 418 aa26.28■■□□□ 1.8
CHRD-217ENST00000496527 MORC4Q8TE76 937 aa26.28■■□□□ 1.8
CHRD-217ENST00000496527 UPF3BQ9BZI7 483 aaKnown RBP26.28■■□□□ 1.8
CHRD-217ENST00000496527 MAP3K20Q9NYL2 800 aaKnown RBP26.28■■□□□ 1.8
CHRD-217ENST00000496527 DDX49Q9Y6V7 483 aaKnown RBP26.28■■□□□ 1.8
CHRD-217ENST00000496527 OPLAHO14841 1288 aa26.27■■□□□ 1.8
CHRD-217ENST00000496527 SEC24BO95487 1268 aa26.27■■□□□ 1.8
CHRD-217ENST00000496527 MNX1P50219 401 aaPredicted RBP26.27■■□□□ 1.8
CHRD-217ENST00000496527 CCDC144BQ3MJ40 725 aa26.27■■□□□ 1.8
CHRD-217ENST00000496527 SAMD3Q8N6K7 520 aa26.27■■□□□ 1.8
CHRD-217ENST00000496527 HTATIP2Q9BUP3 242 aa26.27■■□□□ 1.8
CHRD-217ENST00000496527 KATNBL1Q9H079 304 aa26.27■■□□□ 1.8
CHRD-217ENST00000496527 XPNPEP3Q9NQH7 507 aa26.27■■□□□ 1.8
CHRD-217ENST00000496527 MCM3APO60318 1980 aa26.27■■□□□ 1.8
CHRD-217ENST00000496527 LCTP09848 1927 aa26.26■■□□□ 1.79
CHRD-217ENST00000496527 CCDC196A0A1B0GTZ2 297 aa26.26■■□□□ 1.79
CHRD-217ENST00000496527 MYCNP04198 464 aaPredicted RBP26.26■■□□□ 1.79
CHRD-217ENST00000496527 HSD17B4P51659 736 aa26.26■■□□□ 1.79
CHRD-217ENST00000496527 PDE4DQ08499 809 aa26.26■■□□□ 1.79
CHRD-217ENST00000496527 EEPD1Q7L9B9 569 aa26.26■■□□□ 1.79
CHRD-217ENST00000496527 TAAR1Q96RJ0 339 aa26.26■■□□□ 1.79
CHRD-217ENST00000496527 C11orf49Q9H6J7 331 aa26.26■■□□□ 1.79
CHRD-217ENST00000496527 PDRG1Q9NUG6 133 aa26.26■■□□□ 1.79
CHRD-217ENST00000496527 GCOM1H8Y6P7 765 aaPredicted RBP26.25■■□□□ 1.79
CHRD-217ENST00000496527 POLR2MP0CAP2 368 aa26.25■■□□□ 1.79
CHRD-217ENST00000496527 CDC27P30260 824 aa26.25■■□□□ 1.79
CHRD-217ENST00000496527 GHRHRQ02643 423 aa26.25■■□□□ 1.79
CHRD-217ENST00000496527 C8orf34Q49A92 452 aa26.25■■□□□ 1.79
CHRD-217ENST00000496527 NSUN6Q8TEA1 469 aaKnown RBP26.25■■□□□ 1.79
CHRD-217ENST00000496527 RMDN3Q96TC7 470 aa26.25■■□□□ 1.79
CHRD-217ENST00000496527 VTA1Q9NP79 307 aa26.25■■□□□ 1.79
CHRD-217ENST00000496527 FAM217BQ9NTX9 383 aaPredicted RBP26.25■■□□□ 1.79
CHRD-217ENST00000496527 COL20A1Q9P218 1284 aa26.25■■□□□ 1.79
CHRD-217ENST00000496527 CNTNAP5Q8WYK1 1306 aa26.24■■□□□ 1.79
CHRD-217ENST00000496527 hCG_1642624A0A1W2PR95 340 aa26.24■■□□□ 1.79
CHRD-217ENST00000496527 DNM1LO00429 736 aa26.24■■□□□ 1.79
CHRD-217ENST00000496527 TOB2Q14106 344 aaPredicted RBP26.24■■□□□ 1.79
CHRD-217ENST00000496527 GJC2Q5T442 439 aaPredicted RBP26.24■■□□□ 1.79
CHRD-217ENST00000496527 FBXO16Q8IX29 292 aaPredicted RBP26.24■■□□□ 1.79
CHRD-217ENST00000496527 LENG1Q96BZ8 264 aaPredicted RBP26.24■■□□□ 1.79
CHRD-217ENST00000496527 FRMPD3Q5JV73 1810 aa26.23■■□□□ 1.79
CHRD-217ENST00000496527 KBTBD13C9JR72 458 aa26.23■■□□□ 1.79
CHRD-217ENST00000496527 DUSP11O75319 330 aaKnown RBP26.23■■□□□ 1.79
CHRD-217ENST00000496527 PGK1P00558 417 aa26.23■■□□□ 1.79
CHRD-217ENST00000496527 EDNRBP24530 442 aa26.23■■□□□ 1.79
CHRD-217ENST00000496527 HOXA13P31271 388 aaPredicted RBP26.23■■□□□ 1.79
CHRD-217ENST00000496527 ADD1P35611 737 aaKnown RBP26.23■■□□□ 1.79
CHRD-217ENST00000496527 EVCP57679 992 aa26.23■■□□□ 1.79
CHRD-217ENST00000496527 TNFAIP2Q03169 654 aa26.23■■□□□ 1.79
CHRD-217ENST00000496527 LRRC41Q15345 812 aa26.23■■□□□ 1.79
CHRD-217ENST00000496527 ARHGEF16Q5VV41 709 aa26.23■■□□□ 1.79
CHRD-217ENST00000496527 NOL8Q76FK4 1167 aaKnown RBP26.23■■□□□ 1.79
CHRD-217ENST00000496527 ADCYAP1R1P41586 468 aa26.22■■□□□ 1.79
CHRD-217ENST00000496527 FUT2Q10981 343 aa26.22■■□□□ 1.79
CHRD-217ENST00000496527 IQSEC1Q6DN90 963 aa26.22■■□□□ 1.79
CHRD-217ENST00000496527 TAPT1Q6NXT6 567 aa26.22■■□□□ 1.79
CHRD-217ENST00000496527 RNF180Q86T96 592 aa26.22■■□□□ 1.79
CHRD-217ENST00000496527 DPF3Q92784 378 aa26.22■■□□□ 1.79
CHRD-217ENST00000496527 IWS1Q96ST2 819 aa26.22■■□□□ 1.79
CHRD-217ENST00000496527 PDGFCQ9NRA1 345 aa26.22■■□□□ 1.79
CHRD-217ENST00000496527 V9GY48 417 aaPredicted RBP26.22■■□□□ 1.79
CHRD-217ENST00000496527 COL6A1P12109 1028 aa26.21■■□□□ 1.79
CHRD-217ENST00000496527 PDIA3P30101 505 aaKnown RBP26.21■■□□□ 1.79
CHRD-217ENST00000496527 HEATR3Q7Z4Q2 680 aa26.21■■□□□ 1.79
CHRD-217ENST00000496527 CUL5Q93034 780 aa26.21■■□□□ 1.79
CHRD-217ENST00000496527 SPC25Q9HBM1 224 aa26.21■■□□□ 1.79
CHRD-217ENST00000496527 NID2Q14112 1375 aa26.2■■□□□ 1.79
CHRD-217ENST00000496527 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.2■■□□□ 1.78
CHRD-217ENST00000496527 ADCY6O43306 1168 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms