RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 RNF20Q5VTR2 975 aa16.84■□□□□ 0.29
PDAP1-204ENST00000496335 CCSAPQ6IQ19 270 aaPredicted RBP16.84■□□□□ 0.29
PDAP1-204ENST00000496335 NOL8Q76FK4 1167 aaKnown RBP16.84■□□□□ 0.29
PDAP1-204ENST00000496335 HOMER1Q86YM7 354 aa16.84■□□□□ 0.29
PDAP1-204ENST00000496335 ZNF654Q8IZM8 581 aa16.84■□□□□ 0.29
PDAP1-204ENST00000496335 KLHDC9Q8NEP7 349 aa16.84■□□□□ 0.29
PDAP1-204ENST00000496335 PIGSQ96S52 555 aa16.84■□□□□ 0.29
PDAP1-204ENST00000496335 AMNQ9BXJ7 453 aa16.84■□□□□ 0.29
PDAP1-204ENST00000496335 RIOX1Q9H6W3 641 aa16.84■□□□□ 0.29
PDAP1-204ENST00000496335 ATP11BQ9Y2G3 1177 aa16.84■□□□□ 0.29
PDAP1-204ENST00000496335 MRPL11Q9Y3B7 192 aaKnown RBP16.84■□□□□ 0.29
PDAP1-204ENST00000496335 A0A1W2PQ45 241 aaPredicted RBP16.83■□□□□ 0.28
PDAP1-204ENST00000496335 A0A1W2PQY0 241 aa16.83■□□□□ 0.28
PDAP1-204ENST00000496335 CENPBP07199 599 aaPredicted RBP16.83■□□□□ 0.28
PDAP1-204ENST00000496335 SMPD1P17405 629 aa16.83■□□□□ 0.28
PDAP1-204ENST00000496335 ACLYP53396 1101 aa16.83■□□□□ 0.28
PDAP1-204ENST00000496335 GJA9P57773 515 aa16.83■□□□□ 0.28
PDAP1-204ENST00000496335 ADCK5Q3MIX3 580 aa16.83■□□□□ 0.28
PDAP1-204ENST00000496335 TRIM60Q495X7 471 aa16.83■□□□□ 0.28
PDAP1-204ENST00000496335 NFXL1Q6ZNB6 911 aa16.83■□□□□ 0.28
PDAP1-204ENST00000496335 PIBF1Q8WXW3 757 aa16.83■□□□□ 0.28
PDAP1-204ENST00000496335 TMEM87BQ96K49 555 aa16.83■□□□□ 0.28
PDAP1-204ENST00000496335 MTA3Q9BTC8 594 aa16.83■□□□□ 0.28
PDAP1-204ENST00000496335 UPF3AQ9H1J1 476 aaKnown RBP16.83■□□□□ 0.28
PDAP1-204ENST00000496335 PRO3102Q9H379 93 aa16.83■□□□□ 0.28
PDAP1-204ENST00000496335 VTA1Q9NP79 307 aa16.83■□□□□ 0.28
PDAP1-204ENST00000496335 COL20A1Q9P218 1284 aa16.83■□□□□ 0.28
PDAP1-204ENST00000496335 CCDC69A6NI79 296 aa16.82■□□□□ 0.28
PDAP1-204ENST00000496335 OPLAHO14841 1288 aa16.82■□□□□ 0.28
PDAP1-204ENST00000496335 CTAGE5O15320 804 aa16.82■□□□□ 0.28
PDAP1-204ENST00000496335 DDAH1O94760 285 aa16.82■□□□□ 0.28
PDAP1-204ENST00000496335 RXRAP19793 462 aa16.82■□□□□ 0.28
PDAP1-204ENST00000496335 BEX3Q00994 111 aa16.82■□□□□ 0.28
PDAP1-204ENST00000496335 PDE4DQ08499 809 aa16.82■□□□□ 0.28
PDAP1-204ENST00000496335 GNASQ5JWF2 1037 aa16.82■□□□□ 0.28
PDAP1-204ENST00000496335 IQSEC1Q6DN90 963 aa16.82■□□□□ 0.28
PDAP1-204ENST00000496335 MCF2L2Q86YR7 1114 aa16.82■□□□□ 0.28
PDAP1-204ENST00000496335 RAB11FIP4Q86YS3 637 aa16.82■□□□□ 0.28
PDAP1-204ENST00000496335 DNERQ8NFT8 737 aa16.82■□□□□ 0.28
PDAP1-204ENST00000496335 SYTL5Q8TDW5 730 aaPredicted RBP16.82■□□□□ 0.28
PDAP1-204ENST00000496335 TCEANC2Q96MN5 208 aa16.82■□□□□ 0.28
PDAP1-204ENST00000496335 NEK1Q96PY6 1258 aa16.82■□□□□ 0.28
PDAP1-204ENST00000496335 TAAR1Q96RJ0 339 aa16.82■□□□□ 0.28
PDAP1-204ENST00000496335 TSEN34Q9BSV6 310 aaKnown RBP16.82■□□□□ 0.28
PDAP1-204ENST00000496335 SPC25Q9HBM1 224 aa16.82■□□□□ 0.28
PDAP1-204ENST00000496335 GNEQ9Y223 722 aaKnown RBP16.82■□□□□ 0.28
PDAP1-204ENST00000496335 PCDHA1Q9Y5I3 950 aa16.82■□□□□ 0.28
PDAP1-204ENST00000496335 LOC102724159A0A0B4J2E5 919 aa16.81■□□□□ 0.28
PDAP1-204ENST00000496335 DYNC1LI2O43237 492 aaPredicted RBP16.81■□□□□ 0.28
PDAP1-204ENST00000496335 CFBP00751 764 aa16.81■□□□□ 0.28
PDAP1-204ENST00000496335 EDNRBP24530 442 aa16.81■□□□□ 0.28
PDAP1-204ENST00000496335 CST5P28325 142 aaPredicted RBP16.81■□□□□ 0.28
PDAP1-204ENST00000496335 LIFRP42702 1097 aa16.81■□□□□ 0.28
PDAP1-204ENST00000496335 MAGEA10P43363 369 aaPredicted RBP16.81■□□□□ 0.28
PDAP1-204ENST00000496335 SNX17Q15036 470 aa16.81■□□□□ 0.28
PDAP1-204ENST00000496335 PWP2Q15269 919 aaKnown RBP16.81■□□□□ 0.28
PDAP1-204ENST00000496335 TLK2Q86UE8 772 aa16.81■□□□□ 0.28
PDAP1-204ENST00000496335 TMTC2Q8N394 836 aa16.81■□□□□ 0.28
PDAP1-204ENST00000496335 CTCFLQ8NI51 663 aaPredicted RBP16.81■□□□□ 0.28
PDAP1-204ENST00000496335 GDF15Q99988 308 aa16.81■□□□□ 0.28
PDAP1-204ENST00000496335 PNMA6FA0A0J9YX94 578 aa16.8■□□□□ 0.28
PDAP1-204ENST00000496335 MOXD2PA6NHM9 499 aa16.8■□□□□ 0.28
PDAP1-204ENST00000496335 ASGR1P07306 291 aa16.8■□□□□ 0.28
PDAP1-204ENST00000496335 EXOSC10Q01780 885 aaKnown RBP16.8■□□□□ 0.28
PDAP1-204ENST00000496335 TSGA10IPQ3SY00 556 aa16.8■□□□□ 0.28
PDAP1-204ENST00000496335 C1orf53Q5VUE5 145 aa16.8■□□□□ 0.28
PDAP1-204ENST00000496335 ERICH6BQ5W0A0 696 aa16.8■□□□□ 0.28
PDAP1-204ENST00000496335 MAP3K14Q99558 947 aa16.8■□□□□ 0.28
PDAP1-204ENST00000496335 AP5M1Q9H0R1 490 aa16.8■□□□□ 0.28
PDAP1-204ENST00000496335 STARD7Q9NQZ5 370 aa16.8■□□□□ 0.28
PDAP1-204ENST00000496335 RBM47A0AV96 593 aaKnown RBP16.79■□□□□ 0.28
PDAP1-204ENST00000496335 PLEKHA8P1O95397 391 aa16.79■□□□□ 0.28
PDAP1-204ENST00000496335 HOXA13P31271 388 aaPredicted RBP16.79■□□□□ 0.28
PDAP1-204ENST00000496335 KIF5BP33176 963 aa16.79■□□□□ 0.28
PDAP1-204ENST00000496335 MDM2Q00987 491 aaPredicted RBP16.79■□□□□ 0.28
PDAP1-204ENST00000496335 TLE2Q04725 743 aa16.79■□□□□ 0.28
PDAP1-204ENST00000496335 CMTR1Q8N1G2 835 aaKnown RBP16.79■□□□□ 0.28
PDAP1-204ENST00000496335 PCSK9Q8NBP7 692 aaKnown RBP16.79■□□□□ 0.28
PDAP1-204ENST00000496335 NSUN6Q8TEA1 469 aaKnown RBP16.79■□□□□ 0.28
PDAP1-204ENST00000496335 RMDN3Q96TC7 470 aa16.79■□□□□ 0.28
PDAP1-204ENST00000496335 MPHOSPH6Q99547 160 aaKnown RBP16.79■□□□□ 0.28
PDAP1-204ENST00000496335 WDR11Q9BZH6 1224 aa16.79■□□□□ 0.28
PDAP1-204ENST00000496335 MAF1Q9H063 256 aa16.79■□□□□ 0.28
PDAP1-204ENST00000496335 SLC12A7Q9Y666 1083 aa16.79■□□□□ 0.28
PDAP1-204ENST00000496335 CPA1P15085 419 aa16.78■□□□□ 0.28
PDAP1-204ENST00000496335 EIF2AK2P19525 551 aaKnown RBP16.78■□□□□ 0.28
PDAP1-204ENST00000496335 HSD17B4P51659 736 aa16.78■□□□□ 0.28
PDAP1-204ENST00000496335 NKX3-2P78367 333 aa16.78■□□□□ 0.28
PDAP1-204ENST00000496335 FSCN1Q16658 493 aaKnown RBP16.78■□□□□ 0.28
PDAP1-204ENST00000496335 DUSP28Q4G0W2 176 aa16.78■□□□□ 0.28
PDAP1-204ENST00000496335 DHX32Q7L7V1 743 aaKnown RBP16.78■□□□□ 0.28
PDAP1-204ENST00000496335 SH3RF1Q7Z6J0 888 aa16.78■□□□□ 0.28
PDAP1-204ENST00000496335 SRBD1Q8N5C6 995 aaKnown RBP16.78■□□□□ 0.28
PDAP1-204ENST00000496335 VTI1AQ96AJ9 217 aa16.78■□□□□ 0.28
PDAP1-204ENST00000496335 GLT1D1Q96MS3 346 aa16.78■□□□□ 0.28
PDAP1-204ENST00000496335 SPZ1Q9BXG8 430 aa16.78■□□□□ 0.28
PDAP1-204ENST00000496335 PRDM5Q9NQX1 630 aaPredicted RBP16.78■□□□□ 0.28
PDAP1-204ENST00000496335 KIAA1217Q5T5P2 1943 aa16.78■□□□□ 0.28
PDAP1-204ENST00000496335 B4DLN1 442 aa16.77■□□□□ 0.28
PDAP1-204ENST00000496335 PQBP1O60828 265 aaKnown RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms