RNA–Protein interactions for RNA: ENST00000496071.5

COMMD3-214, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,150 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-214ENST00000496071 GJA9P57773 515 aa19.82■□□□□ 0.76
COMMD3-214ENST00000496071 C1orf53Q5VUE5 145 aa19.82■□□□□ 0.76
COMMD3-214ENST00000496071 NUP133Q8WUM0 1156 aa19.82■□□□□ 0.76
COMMD3-214ENST00000496071 FERMT2Q96AC1 680 aa19.82■□□□□ 0.76
COMMD3-214ENST00000496071 LENG1Q96BZ8 264 aaPredicted RBP19.82■□□□□ 0.76
COMMD3-214ENST00000496071 UPF3AQ9H1J1 476 aaKnown RBP19.82■□□□□ 0.76
COMMD3-214ENST00000496071 LY9Q9HBG7 655 aa19.82■□□□□ 0.76
COMMD3-214ENST00000496071 ZMYND8Q9ULU4 1186 aaPredicted RBP19.82■□□□□ 0.76
COMMD3-214ENST00000496071 CEP290O15078 2479 aa19.82■□□□□ 0.76
COMMD3-214ENST00000496071 CCDC69A6NI79 296 aa19.81■□□□□ 0.76
COMMD3-214ENST00000496071 C6orf222P0C671 652 aaPredicted RBP19.81■□□□□ 0.76
COMMD3-214ENST00000496071 KIF5BP33176 963 aa19.81■□□□□ 0.76
COMMD3-214ENST00000496071 RTP1P59025 263 aa19.81■□□□□ 0.76
COMMD3-214ENST00000496071 NKX3-2P78367 333 aa19.81■□□□□ 0.76
COMMD3-214ENST00000496071 SNX17Q15036 470 aa19.81■□□□□ 0.76
COMMD3-214ENST00000496071 TSGA10IPQ3SY00 556 aa19.81■□□□□ 0.76
COMMD3-214ENST00000496071 TAPT1Q6NXT6 567 aa19.81■□□□□ 0.76
COMMD3-214ENST00000496071 NFXL1Q6ZNB6 911 aa19.81■□□□□ 0.76
COMMD3-214ENST00000496071 NOL8Q76FK4 1167 aaKnown RBP19.81■□□□□ 0.76
COMMD3-214ENST00000496071 ZNF654Q8IZM8 581 aa19.81■□□□□ 0.76
COMMD3-214ENST00000496071 SAMD3Q8N6K7 520 aa19.81■□□□□ 0.76
COMMD3-214ENST00000496071 CTCFLQ8NI51 663 aaPredicted RBP19.81■□□□□ 0.76
COMMD3-214ENST00000496071 MAP3K20Q9NYL2 800 aaKnown RBP19.81■□□□□ 0.76
COMMD3-214ENST00000496071 Q9Y3F1 56 aa19.81■□□□□ 0.76
COMMD3-214ENST00000496071 LRRC37A2A6NM11 1700 aa19.81■□□□□ 0.76
COMMD3-214ENST00000496071 SH2B2O14492 632 aaPredicted RBP19.8■□□□□ 0.76
COMMD3-214ENST00000496071 ADCY6O43306 1168 aa19.8■□□□□ 0.76
COMMD3-214ENST00000496071 CALM1P0DP23 149 aa19.8■□□□□ 0.76
COMMD3-214ENST00000496071 CALM2P0DP24 149 aa19.8■□□□□ 0.76
COMMD3-214ENST00000496071 CALM3P0DP25 149 aa19.8■□□□□ 0.76
COMMD3-214ENST00000496071 ACLYP53396 1101 aa19.8■□□□□ 0.76
COMMD3-214ENST00000496071 PDE4DQ08499 809 aa19.8■□□□□ 0.76
COMMD3-214ENST00000496071 KRT32Q14532 448 aa19.8■□□□□ 0.76
COMMD3-214ENST00000496071 KCNA10Q16322 511 aa19.8■□□□□ 0.76
COMMD3-214ENST00000496071 EEPD1Q7L9B9 569 aa19.8■□□□□ 0.76
COMMD3-214ENST00000496071 NEK1Q96PY6 1258 aa19.8■□□□□ 0.76
COMMD3-214ENST00000496071 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.79■□□□□ 0.76
COMMD3-214ENST00000496071 A0A1W2PQ45 241 aaPredicted RBP19.79■□□□□ 0.76
COMMD3-214ENST00000496071 A0A1W2PQY0 241 aa19.79■□□□□ 0.76
COMMD3-214ENST00000496071 SYN1P17600 705 aa19.79■□□□□ 0.76
COMMD3-214ENST00000496071 SMARCA1P28370 1054 aa19.79■□□□□ 0.76
COMMD3-214ENST00000496071 GNAQP50148 359 aa19.79■□□□□ 0.76
COMMD3-214ENST00000496071 C1QBPQ07021 282 aaKnown RBP19.79■□□□□ 0.76
COMMD3-214ENST00000496071 GNASQ5JWF2 1037 aa19.79■□□□□ 0.76
COMMD3-214ENST00000496071 CCSAPQ6IQ19 270 aaPredicted RBP19.79■□□□□ 0.76
COMMD3-214ENST00000496071 FBXO16Q8IX29 292 aaPredicted RBP19.79■□□□□ 0.76
COMMD3-214ENST00000496071 GDF15Q99988 308 aa19.79■□□□□ 0.76
COMMD3-214ENST00000496071 LZTS2Q9BRK4 669 aa19.79■□□□□ 0.76
COMMD3-214ENST00000496071 AP5M1Q9H0R1 490 aa19.79■□□□□ 0.76
COMMD3-214ENST00000496071 PRO3102Q9H379 93 aa19.79■□□□□ 0.76
COMMD3-214ENST00000496071 PDGFCQ9NRA1 345 aa19.79■□□□□ 0.76
COMMD3-214ENST00000496071 RBM27Q9P2N5 1060 aaKnown RBP19.79■□□□□ 0.76
COMMD3-214ENST00000496071 PRKAG2Q9UGJ0 569 aa19.79■□□□□ 0.76
COMMD3-214ENST00000496071 GNEQ9Y223 722 aaKnown RBP19.79■□□□□ 0.76
COMMD3-214ENST00000496071 ATP11BQ9Y2G3 1177 aa19.79■□□□□ 0.76
COMMD3-214ENST00000496071 PCDHA1Q9Y5I3 950 aa19.79■□□□□ 0.76
COMMD3-214ENST00000496071 PNMA6FA0A0J9YX94 578 aa19.78■□□□□ 0.76
COMMD3-214ENST00000496071 A0A1W2PPC1 479 aa19.78■□□□□ 0.76
COMMD3-214ENST00000496071 SMPD1P17405 629 aa19.78■□□□□ 0.76
COMMD3-214ENST00000496071 EDNRBP24530 442 aa19.78■□□□□ 0.76
COMMD3-214ENST00000496071 BMP8BP34820 402 aa19.78■□□□□ 0.76
COMMD3-214ENST00000496071 HOMER1Q86YM7 354 aa19.78■□□□□ 0.76
COMMD3-214ENST00000496071 SYTL5Q8TDW5 730 aaPredicted RBP19.78■□□□□ 0.76
COMMD3-214ENST00000496071 NSUN6Q8TEA1 469 aaKnown RBP19.78■□□□□ 0.76
COMMD3-214ENST00000496071 TBC1D5Q92609 795 aa19.78■□□□□ 0.76
COMMD3-214ENST00000496071 GLT1D1Q96MS3 346 aa19.78■□□□□ 0.76
COMMD3-214ENST00000496071 PIGSQ96S52 555 aa19.78■□□□□ 0.76
COMMD3-214ENST00000496071 GPHNQ9NQX3 736 aaPredicted RBP19.78■□□□□ 0.76
COMMD3-214ENST00000496071 STARD7Q9NQZ5 370 aa19.78■□□□□ 0.76
COMMD3-214ENST00000496071 DDX49Q9Y6V7 483 aaKnown RBP19.78■□□□□ 0.76
COMMD3-214ENST00000496071 ELP1O95163 1332 aa19.77■□□□□ 0.76
COMMD3-214ENST00000496071 RBM47A0AV96 593 aaKnown RBP19.77■□□□□ 0.76
COMMD3-214ENST00000496071 CYTH3O43739 400 aa19.77■□□□□ 0.76
COMMD3-214ENST00000496071 REC8O95072 547 aa19.77■□□□□ 0.76
COMMD3-214ENST00000496071 CFBP00751 764 aa19.77■□□□□ 0.76
COMMD3-214ENST00000496071 ASGR1P07306 291 aa19.77■□□□□ 0.76
COMMD3-214ENST00000496071 HMGB1P09429 215 aaKnown RBP19.77■□□□□ 0.76
COMMD3-214ENST00000496071 GHRHRQ02643 423 aa19.77■□□□□ 0.76
COMMD3-214ENST00000496071 TRIM60Q495X7 471 aa19.77■□□□□ 0.76
COMMD3-214ENST00000496071 DUSP28Q4G0W2 176 aa19.77■□□□□ 0.76
COMMD3-214ENST00000496071 DHX32Q7L7V1 743 aaKnown RBP19.77■□□□□ 0.76
COMMD3-214ENST00000496071 TLK2Q86UE8 772 aa19.77■□□□□ 0.76
COMMD3-214ENST00000496071 IWS1Q96ST2 819 aa19.77■□□□□ 0.76
COMMD3-214ENST00000496071 SPZ1Q9BXG8 430 aa19.77■□□□□ 0.76
COMMD3-214ENST00000496071 SLC12A7Q9Y666 1083 aa19.77■□□□□ 0.76
COMMD3-214ENST00000496071 MYADML2A6NDP7 307 aa19.76■□□□□ 0.75
COMMD3-214ENST00000496071 DYNC1LI2O43237 492 aaPredicted RBP19.76■□□□□ 0.75
COMMD3-214ENST00000496071 ZEB2O60315 1214 aa19.76■□□□□ 0.75
COMMD3-214ENST00000496071 PPP1R11O60927 126 aaPredicted RBP19.76■□□□□ 0.75
COMMD3-214ENST00000496071 HSD17B4P51659 736 aa19.76■□□□□ 0.75
COMMD3-214ENST00000496071 SLC35G1Q2M3R5 365 aa19.76■□□□□ 0.75
COMMD3-214ENST00000496071 SYNE3Q6ZMZ3 975 aa19.76■□□□□ 0.75
COMMD3-214ENST00000496071 SGMS1Q86VZ5 419 aa19.76■□□□□ 0.75
COMMD3-214ENST00000496071 SCFD2Q8WU76 684 aa19.76■□□□□ 0.75
COMMD3-214ENST00000496071 TAAR1Q96RJ0 339 aa19.76■□□□□ 0.75
COMMD3-214ENST00000496071 RMDN3Q96TC7 470 aa19.76■□□□□ 0.75
COMMD3-214ENST00000496071 MYL10Q9BUA6 226 aa19.76■□□□□ 0.75
COMMD3-214ENST00000496071 WDR11Q9BZH6 1224 aa19.76■□□□□ 0.75
COMMD3-214ENST00000496071 BAZ2BQ9UIF8 2168 aaKnown RBP19.76■□□□□ 0.75
COMMD3-214ENST00000496071 NKRFO15226 690 aaKnown RBP eCLIP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms