RNA–Protein interactions for RNA: ENST00000496049.1

GAPDH-210, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 2

Gene GAPDH, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-210ENST00000496049 ZCCHC17Q9NP64 241 aaKnown RBP17.2■□□□□ 0.34
GAPDH-210ENST00000496049 PDHXO00330 501 aa17.19■□□□□ 0.34
GAPDH-210ENST00000496049 EVI5O60447 810 aa17.19■□□□□ 0.34
GAPDH-210ENST00000496049 F13A1P00488 732 aa17.19■□□□□ 0.34
GAPDH-210ENST00000496049 HERVK_113P62684 666 aa17.19■□□□□ 0.34
GAPDH-210ENST00000496049 GPAT2Q6NUI2 795 aa17.19■□□□□ 0.34
GAPDH-210ENST00000496049 GPR153Q6NV75 609 aa17.19■□□□□ 0.34
GAPDH-210ENST00000496049 LBX2Q6XYB7 198 aa17.19■□□□□ 0.34
GAPDH-210ENST00000496049 DIS3L2Q8IYB7 885 aaKnown RBP17.19■□□□□ 0.34
GAPDH-210ENST00000496049 DAGLBQ8NCG7 672 aa17.19■□□□□ 0.34
GAPDH-210ENST00000496049 COA7Q96BR5 231 aa17.19■□□□□ 0.34
GAPDH-210ENST00000496049 PCDHA4Q9UN74 947 aa17.19■□□□□ 0.34
GAPDH-210ENST00000496049 KCNJ14Q9UNX9 436 aa17.19■□□□□ 0.34
GAPDH-210ENST00000496049 MRPL11Q9Y3B7 192 aaKnown RBP17.19■□□□□ 0.34
GAPDH-210ENST00000496049 TESPA1A2RU30 521 aaPredicted RBP17.18■□□□□ 0.34
GAPDH-210ENST00000496049 SMCO2A6NFE2 343 aa17.18■□□□□ 0.34
GAPDH-210ENST00000496049 BTBD19C9JJ37 291 aa17.18■□□□□ 0.34
GAPDH-210ENST00000496049 PPP1R11O60927 126 aaPredicted RBP17.18■□□□□ 0.34
GAPDH-210ENST00000496049 MRPL12P52815 198 aaKnown RBP17.18■□□□□ 0.34
GAPDH-210ENST00000496049 PKP1Q13835 747 aa17.18■□□□□ 0.34
GAPDH-210ENST00000496049 TAF1CQ15572 869 aaPredicted RBP17.18■□□□□ 0.34
GAPDH-210ENST00000496049 FOXD4L5Q5VV16 416 aaPredicted RBP17.18■□□□□ 0.34
GAPDH-210ENST00000496049 BRAPQ7Z569 592 aa17.18■□□□□ 0.34
GAPDH-210ENST00000496049 CPXCR1Q8N123 301 aa17.18■□□□□ 0.34
GAPDH-210ENST00000496049 FOXD4L4Q8WXT5 416 aaPredicted RBP17.18■□□□□ 0.34
GAPDH-210ENST00000496049 TEX13BQ9BXU2 312 aa17.18■□□□□ 0.34
GAPDH-210ENST00000496049 ZMYND12Q9H0C1 365 aa17.18■□□□□ 0.34
GAPDH-210ENST00000496049 FOXP1Q9H334 677 aaPredicted RBP17.18■□□□□ 0.34
GAPDH-210ENST00000496049 ADAMTS5Q9UNA0 930 aa17.18■□□□□ 0.34
GAPDH-210ENST00000496049 MYH15Q9Y2K3 1946 aa17.17■□□□□ 0.34
GAPDH-210ENST00000496049 ATP2A1O14983 1001 aa17.17■□□□□ 0.34
GAPDH-210ENST00000496049 FARP2O94887 1054 aaPredicted RBP17.17■□□□□ 0.34
GAPDH-210ENST00000496049 COPB2P35606 906 aa17.17■□□□□ 0.34
GAPDH-210ENST00000496049 PLS1Q14651 629 aa17.17■□□□□ 0.34
GAPDH-210ENST00000496049 TKFCQ3LXA3 575 aa17.17■□□□□ 0.34
GAPDH-210ENST00000496049 MCTP2Q6DN12 878 aa17.17■□□□□ 0.34
GAPDH-210ENST00000496049 SNRNP48Q6IEG0 339 aaKnown RBP17.17■□□□□ 0.34
GAPDH-210ENST00000496049 FERMT3Q86UX7 667 aa17.17■□□□□ 0.34
GAPDH-210ENST00000496049 BLIDQ8IZY5 108 aa17.17■□□□□ 0.34
GAPDH-210ENST00000496049 REXO1Q8N1G1 1221 aaKnown RBP17.17■□□□□ 0.34
GAPDH-210ENST00000496049 PSTPIP2Q9H939 334 aa17.17■□□□□ 0.34
GAPDH-210ENST00000496049 RAVER2Q9HCJ3 691 aaKnown RBP17.17■□□□□ 0.34
GAPDH-210ENST00000496049 RIC8AQ9NPQ8 531 aa17.17■□□□□ 0.34
GAPDH-210ENST00000496049 GJB4Q9NTQ9 266 aa17.17■□□□□ 0.34
GAPDH-210ENST00000496049 ALAS1P13196 640 aa17.16■□□□□ 0.34
GAPDH-210ENST00000496049 GCLCP48506 637 aaPredicted RBP17.16■□□□□ 0.34
GAPDH-210ENST00000496049 TYW1BQ6NUM6 668 aa17.16■□□□□ 0.34
GAPDH-210ENST00000496049 MCF2L2Q86YR7 1114 aa17.16■□□□□ 0.34
GAPDH-210ENST00000496049 P2RX7Q99572 595 aaKnown RBP17.16■□□□□ 0.34
GAPDH-210ENST00000496049 PAGR1Q9BTK6 254 aa17.16■□□□□ 0.34
GAPDH-210ENST00000496049 ZNF536O15090 1300 aa17.16■□□□□ 0.34
GAPDH-210ENST00000496049 CCDC194A0A1B0GVG4 234 aa17.15■□□□□ 0.34
GAPDH-210ENST00000496049 GJA8P48165 433 aa17.15■□□□□ 0.34
GAPDH-210ENST00000496049 RESTQ13127 1097 aa17.15■□□□□ 0.34
GAPDH-210ENST00000496049 NOSTRINQ8IVI9 506 aa17.15■□□□□ 0.34
GAPDH-210ENST00000496049 REPS2Q8NFH8 660 aa17.15■□□□□ 0.34
GAPDH-210ENST00000496049 AGBL1Q96MI9 1066 aa17.15■□□□□ 0.34
GAPDH-210ENST00000496049 ZFYVE28Q9HCC9 887 aa17.15■□□□□ 0.34
GAPDH-210ENST00000496049 ZNF214Q9UL59 606 aaPredicted RBP17.15■□□□□ 0.34
GAPDH-210ENST00000496049 NOL7Q9UMY1 257 aaKnown RBP17.15■□□□□ 0.34
GAPDH-210ENST00000496049 RABGAP1Q9Y3P9 1069 aa17.15■□□□□ 0.34
GAPDH-210ENST00000496049 U2AF2P26368 475 aaKnown RBP eCLIP17.14■□□□□ 0.33
GAPDH-210ENST00000496049 STAT3P40763 770 aa17.14■□□□□ 0.33
GAPDH-210ENST00000496049 CCNA1P78396 465 aa17.14■□□□□ 0.33
GAPDH-210ENST00000496049 TMEM132BQ14DG7 1078 aa17.14■□□□□ 0.33
GAPDH-210ENST00000496049 KRT25Q7Z3Z0 450 aa17.14■□□□□ 0.33
GAPDH-210ENST00000496049 FAM43AQ8N2R8 423 aa17.14■□□□□ 0.33
GAPDH-210ENST00000496049 SAMD3Q8N6K7 520 aa17.14■□□□□ 0.33
GAPDH-210ENST00000496049 GBP4Q96PP9 640 aa17.14■□□□□ 0.33
GAPDH-210ENST00000496049 EHMT1Q9H9B1 1298 aa17.14■□□□□ 0.33
GAPDH-210ENST00000496049 HOMER2Q9NSB8 354 aa17.14■□□□□ 0.33
GAPDH-210ENST00000496049 RNF146Q9NTX7 359 aa17.14■□□□□ 0.33
GAPDH-210ENST00000496049 FBXO40Q9UH90 709 aa17.14■□□□□ 0.33
GAPDH-210ENST00000496049 ZDHHC9Q9Y397 364 aa17.14■□□□□ 0.33
GAPDH-210ENST00000496049 RPTORQ8N122 1335 aa17.14■□□□□ 0.33
GAPDH-210ENST00000496049 EYSQ5T1H1 3165 aa17.13■□□□□ 0.33
GAPDH-210ENST00000496049 BTBD18B2RXH4 712 aa17.13■□□□□ 0.33
GAPDH-210ENST00000496049 SLC25A27O95847 323 aa17.13■□□□□ 0.33
GAPDH-210ENST00000496049 CYP2C8P10632 490 aa17.13■□□□□ 0.33
GAPDH-210ENST00000496049 CCL5P13501 91 aa17.13■□□□□ 0.33
GAPDH-210ENST00000496049 AP3B2Q13367 1082 aa17.13■□□□□ 0.33
GAPDH-210ENST00000496049 CHST13Q8NET6 341 aa17.13■□□□□ 0.33
GAPDH-210ENST00000496049 ZNF396Q96N95 335 aaPredicted RBP17.13■□□□□ 0.33
GAPDH-210ENST00000496049 TRERF1Q96PN7 1200 aa17.13■□□□□ 0.33
GAPDH-210ENST00000496049 MAF1Q9H063 256 aa17.13■□□□□ 0.33
GAPDH-210ENST00000496049 SPATC1LQ9H0A9 340 aa17.13■□□□□ 0.33
GAPDH-210ENST00000496049 ACAD9Q9H845 621 aa17.13■□□□□ 0.33
GAPDH-210ENST00000496049 PRUNE2Q8WUY3 3088 aa17.12■□□□□ 0.33
GAPDH-210ENST00000496049 SPDYE3A6NKU9 549 aa17.12■□□□□ 0.33
GAPDH-210ENST00000496049 GCOM1H8Y6P7 765 aaPredicted RBP17.12■□□□□ 0.33
GAPDH-210ENST00000496049 PIK3CDO00329 1044 aa17.12■□□□□ 0.33
GAPDH-210ENST00000496049 FOSP01100 380 aaPredicted RBP17.12■□□□□ 0.33
GAPDH-210ENST00000496049 GJB1P08034 283 aa17.12■□□□□ 0.33
GAPDH-210ENST00000496049 POLR2MP0CAP2 368 aa17.12■□□□□ 0.33
GAPDH-210ENST00000496049 KIF22Q14807 665 aa17.12■□□□□ 0.33
GAPDH-210ENST00000496049 ATL3Q6DD88 541 aa17.12■□□□□ 0.33
GAPDH-210ENST00000496049 RIOX2Q8IUF8 465 aa17.12■□□□□ 0.33
GAPDH-210ENST00000496049 CCAR1Q8IX12 1150 aaKnown RBP17.12■□□□□ 0.33
GAPDH-210ENST00000496049 TNPO1Q92973 898 aaKnown RBP17.12■□□□□ 0.33
GAPDH-210ENST00000496049 RNF208Q9H0X6 261 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms