RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, human

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALD1-223	ENST00000496024	NOL8	Q76FK4	1167 aa	Known RBP	11.37	□□□□□ -0.59
CALD1-223	ENST00000496024	ARMCX2	Q7L311	632 aa		11.37	□□□□□ -0.59
CALD1-223	ENST00000496024	EEPD1	Q7L9B9	569 aa		11.37	□□□□□ -0.59
CALD1-223	ENST00000496024	ZNF467	Q7Z7K2	595 aa	Predicted RBP	11.37	□□□□□ -0.59
CALD1-223	ENST00000496024	FAM217B	Q9NTX9	383 aa	Predicted RBP	11.37	□□□□□ -0.59
CALD1-223	ENST00000496024	RBM28	Q9NW13	759 aa	Known RBP	11.37	□□□□□ -0.59
CALD1-223	ENST00000496024	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	11.37	□□□□□ -0.59
CALD1-223	ENST00000496024	PDE4DIP	Q5VU43	2346 aa		11.37	□□□□□ -0.59
CALD1-223	ENST00000496024	SYNGAP1	Q96PV0	1343 aa		11.36	□□□□□ -0.59
CALD1-223	ENST00000496024	ASB14	A6NK59	587 aa		11.36	□□□□□ -0.59
CALD1-223	ENST00000496024	OPLAH	O14841	1288 aa		11.36	□□□□□ -0.59
CALD1-223	ENST00000496024	PPFIA3	O75145	1194 aa		11.36	□□□□□ -0.59
CALD1-223	ENST00000496024	SMARCA1	P28370	1054 aa		11.36	□□□□□ -0.59
CALD1-223	ENST00000496024	HOXA13	P31271	388 aa	Predicted RBP	11.36	□□□□□ -0.59
CALD1-223	ENST00000496024	TRAF1	Q13077	416 aa		11.36	□□□□□ -0.59
CALD1-223	ENST00000496024	STK3	Q13188	491 aa		11.36	□□□□□ -0.59
CALD1-223	ENST00000496024	ACVR2B	Q13705	512 aa		11.36	□□□□□ -0.59
CALD1-223	ENST00000496024	MAMDC4	Q6UXC1	1216 aa		11.36	□□□□□ -0.59
CALD1-223	ENST00000496024	MCF2L2	Q86YR7	1114 aa		11.36	□□□□□ -0.59
CALD1-223	ENST00000496024	MSL3	Q8N5Y2	521 aa	Known RBP	11.36	□□□□□ -0.59
CALD1-223	ENST00000496024	SYTL5	Q8TDW5	730 aa	Predicted RBP	11.36	□□□□□ -0.59
CALD1-223	ENST00000496024	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	11.36	□□□□□ -0.59
CALD1-223	ENST00000496024	LENG1	Q96BZ8	264 aa	Predicted RBP	11.36	□□□□□ -0.59
CALD1-223	ENST00000496024	AGXT2	Q9BYV1	514 aa		11.36	□□□□□ -0.59
CALD1-223	ENST00000496024	NCOA5	Q9HCD5	579 aa	Known RBP	11.36	□□□□□ -0.59
CALD1-223	ENST00000496024	ADD3	Q9UEY8	706 aa	Known RBP	11.36	□□□□□ -0.59
CALD1-223	ENST00000496024	DDX20	Q9UHI6	824 aa	Known RBP	11.36	□□□□□ -0.59
CALD1-223	ENST00000496024		V9GY48	417 aa	Predicted RBP	11.36	□□□□□ -0.59
CALD1-223	ENST00000496024	CNTNAP5	Q8WYK1	1306 aa		11.35	□□□□□ -0.59
CALD1-223	ENST00000496024	SEPT4	O43236	478 aa		11.35	□□□□□ -0.59
CALD1-223	ENST00000496024	FARP2	O94887	1054 aa	Predicted RBP	11.35	□□□□□ -0.59
CALD1-223	ENST00000496024	ZNF865	P0CJ78	1059 aa	Predicted RBP	11.35	□□□□□ -0.59
CALD1-223	ENST00000496024	PDIA3	P30101	505 aa	Known RBP	11.35	□□□□□ -0.59
CALD1-223	ENST00000496024	RGS19	P49795	217 aa		11.35	□□□□□ -0.59
CALD1-223	ENST00000496024	ALDH5A1	P51649	535 aa	Predicted RBP	11.35	□□□□□ -0.59
CALD1-223	ENST00000496024	MLLT1	Q03111	559 aa	Predicted RBP	11.35	□□□□□ -0.59
CALD1-223	ENST00000496024	LHX8	Q68G74	356 aa		11.35	□□□□□ -0.59
CALD1-223	ENST00000496024	HEATR3	Q7Z4Q2	680 aa		11.35	□□□□□ -0.59
CALD1-223	ENST00000496024	FCHSD1	Q86WN1	690 aa		11.35	□□□□□ -0.59
CALD1-223	ENST00000496024	FBXO16	Q8IX29	292 aa	Predicted RBP	11.35	□□□□□ -0.59
CALD1-223	ENST00000496024	FBXL16	Q8N461	479 aa		11.35	□□□□□ -0.59
CALD1-223	ENST00000496024	RGS22	Q8NE09	1264 aa		11.35	□□□□□ -0.59
CALD1-223	ENST00000496024	TAAR1	Q96RJ0	339 aa		11.35	□□□□□ -0.59
CALD1-223	ENST00000496024	CRISPLD2	Q9H0B8	497 aa		11.35	□□□□□ -0.59
CALD1-223	ENST00000496024	ABHD16B	Q9H3Z7	469 aa		11.35	□□□□□ -0.59
CALD1-223	ENST00000496024	COL20A1	Q9P218	1284 aa		11.35	□□□□□ -0.59
CALD1-223	ENST00000496024	FRMPD3	Q5JV73	1810 aa		11.35	□□□□□ -0.59
CALD1-223	ENST00000496024	CCDC196	A0A1B0GTZ2	297 aa		11.34	□□□□□ -0.59
CALD1-223	ENST00000496024	MSC	O60682	206 aa		11.34	□□□□□ -0.59
CALD1-223	ENST00000496024	RARB	P10826	455 aa		11.34	□□□□□ -0.59
CALD1-223	ENST00000496024	EIF2AK2	P19525	551 aa	Known RBP	11.34	□□□□□ -0.59
CALD1-223	ENST00000496024	NEK4	P51957	841 aa		11.34	□□□□□ -0.59
CALD1-223	ENST00000496024	RCAN1	P53805	252 aa		11.34	□□□□□ -0.59
CALD1-223	ENST00000496024	AK2	P54819	239 aa		11.34	□□□□□ -0.59
CALD1-223	ENST00000496024	PDE4D	Q08499	809 aa		11.34	□□□□□ -0.59
CALD1-223	ENST00000496024	FUT2	Q10981	343 aa		11.34	□□□□□ -0.59
CALD1-223	ENST00000496024	CCDC144B	Q3MJ40	725 aa		11.34	□□□□□ -0.59
CALD1-223	ENST00000496024	DIS3L	Q8TF46	1054 aa	Known RBP	11.34	□□□□□ -0.59
CALD1-223	ENST00000496024	PHKB	Q93100	1093 aa		11.34	□□□□□ -0.59
CALD1-223	ENST00000496024	PAWR	Q96IZ0	340 aa	Known RBP	11.34	□□□□□ -0.59
CALD1-223	ENST00000496024	C22orf23	Q9BZE7	217 aa		11.34	□□□□□ -0.59
CALD1-223	ENST00000496024	PDGFC	Q9NRA1	345 aa		11.34	□□□□□ -0.59
CALD1-223	ENST00000496024	NRBP1	Q9UHY1	535 aa		11.34	□□□□□ -0.59
CALD1-223	ENST00000496024	OGDHL	Q9ULD0	1010 aa		11.34	□□□□□ -0.59
CALD1-223	ENST00000496024	FAM184B	Q9ULE4	1060 aa		11.34	□□□□□ -0.59
CALD1-223	ENST00000496024	MKI67	P46013	3256 aa	Known RBP	11.34	□□□□□ -0.59
CALD1-223	ENST00000496024	GCOM1	H8Y6P7	765 aa	Predicted RBP	11.33	□□□□□ -0.6
CALD1-223	ENST00000496024	DTNB	O60941	627 aa		11.33	□□□□□ -0.6
CALD1-223	ENST00000496024	PGK1	P00558	417 aa		11.33	□□□□□ -0.6
CALD1-223	ENST00000496024	POLR2M	P0CAP2	368 aa		11.33	□□□□□ -0.6
CALD1-223	ENST00000496024	AKR1A1	P14550	325 aa		11.33	□□□□□ -0.6
CALD1-223	ENST00000496024	HSD17B4	P51659	736 aa		11.33	□□□□□ -0.6
CALD1-223	ENST00000496024	NAPA	P54920	295 aa		11.33	□□□□□ -0.6
CALD1-223	ENST00000496024	AKAP17A	Q02040	695 aa	Known RBP	11.33	□□□□□ -0.6
CALD1-223	ENST00000496024	PPP2R5B	Q15173	497 aa		11.33	□□□□□ -0.6
CALD1-223	ENST00000496024	GJC2	Q5T442	439 aa	Predicted RBP	11.33	□□□□□ -0.6
CALD1-223	ENST00000496024	ARHGEF16	Q5VV41	709 aa		11.33	□□□□□ -0.6
CALD1-223	ENST00000496024	WWC2	Q6AWC2	1192 aa		11.33	□□□□□ -0.6
CALD1-223	ENST00000496024	USP17L6P	Q6QN14	398 aa		11.33	□□□□□ -0.6
CALD1-223	ENST00000496024	DNER	Q8NFT8	737 aa		11.33	□□□□□ -0.6
CALD1-223	ENST00000496024	CUL5	Q93034	780 aa		11.33	□□□□□ -0.6
CALD1-223	ENST00000496024	ZNF274	Q96GC6	653 aa	Predicted RBP	11.33	□□□□□ -0.6
CALD1-223	ENST00000496024	RMDN3	Q96TC7	470 aa		11.33	□□□□□ -0.6
CALD1-223	ENST00000496024	MPHOSPH6	Q99547	160 aa	Known RBP	11.33	□□□□□ -0.6
CALD1-223	ENST00000496024	KATNBL1	Q9H079	304 aa		11.33	□□□□□ -0.6
CALD1-223	ENST00000496024	XPNPEP3	Q9NQH7	507 aa		11.33	□□□□□ -0.6
CALD1-223	ENST00000496024	CEP290	O15078	2479 aa		11.32	□□□□□ -0.6
CALD1-223	ENST00000496024	TNRC18	O15417	2968 aa	Predicted RBP	11.32	□□□□□ -0.6
CALD1-223	ENST00000496024	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	11.32	□□□□□ -0.6
CALD1-223	ENST00000496024		B4DLN1	442 aa		11.32	□□□□□ -0.6
CALD1-223	ENST00000496024	CPLX1	O14810	134 aa		11.32	□□□□□ -0.6
CALD1-223	ENST00000496024	ADCY6	O43306	1168 aa		11.32	□□□□□ -0.6
CALD1-223	ENST00000496024	MYCL	P12524	364 aa	Predicted RBP	11.32	□□□□□ -0.6
CALD1-223	ENST00000496024	PTGS1	P23219	599 aa		11.32	□□□□□ -0.6
CALD1-223	ENST00000496024	ADCYAP1R1	P41586	468 aa		11.32	□□□□□ -0.6
CALD1-223	ENST00000496024	MRPL12	P52815	198 aa	Known RBP	11.32	□□□□□ -0.6
CALD1-223	ENST00000496024	EVC	P57679	992 aa		11.32	□□□□□ -0.6
CALD1-223	ENST00000496024	IRX5	P78411	483 aa	Predicted RBP	11.32	□□□□□ -0.6
CALD1-223	ENST00000496024	TNFAIP2	Q03169	654 aa		11.32	□□□□□ -0.6
CALD1-223	ENST00000496024	ANKRD1	Q15327	319 aa		11.32	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 17 ms