RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 ASB14A6NK59 587 aa14.38□□□□□ -0.11
MRPL55-233ENST00000495899 ZBTB5O15062 677 aa14.38□□□□□ -0.11
MRPL55-233ENST00000495899 EIF5BO60841 1220 aaKnown RBP14.38□□□□□ -0.11
MRPL55-233ENST00000495899 SNAI1O95863 264 aaPredicted RBP14.38□□□□□ -0.11
MRPL55-233ENST00000495899 GNAQP50148 359 aa14.38□□□□□ -0.11
MRPL55-233ENST00000495899 CNTN2Q02246 1040 aa14.38□□□□□ -0.11
MRPL55-233ENST00000495899 QRICH1Q2TAL8 776 aa14.38□□□□□ -0.11
MRPL55-233ENST00000495899 ADCK5Q3MIX3 580 aa14.38□□□□□ -0.11
MRPL55-233ENST00000495899 PRAMEF19Q5SWL8 479 aa14.38□□□□□ -0.11
MRPL55-233ENST00000495899 NSMFQ6X4W1 530 aa14.38□□□□□ -0.11
MRPL55-233ENST00000495899 NECAB2Q7Z6G3 386 aa14.38□□□□□ -0.11
MRPL55-233ENST00000495899 SGMS1Q86VZ5 419 aa14.38□□□□□ -0.11
MRPL55-233ENST00000495899 FBXO11Q86XK2 927 aa14.38□□□□□ -0.11
MRPL55-233ENST00000495899 HOMEZQ8IX15 550 aa14.38□□□□□ -0.11
MRPL55-233ENST00000495899 CTCFLQ8NI51 663 aaPredicted RBP14.38□□□□□ -0.11
MRPL55-233ENST00000495899 FGD4Q96M96 766 aa14.38□□□□□ -0.11
MRPL55-233ENST00000495899 LZTS2Q9BRK4 669 aa14.38□□□□□ -0.11
MRPL55-233ENST00000495899 AMNQ9BXJ7 453 aa14.38□□□□□ -0.11
MRPL55-233ENST00000495899 ABHD16BQ9H3Z7 469 aa14.38□□□□□ -0.11
MRPL55-233ENST00000495899 VAT1LQ9HCJ6 419 aa14.38□□□□□ -0.11
MRPL55-233ENST00000495899 GPHNQ9NQX3 736 aaPredicted RBP14.38□□□□□ -0.11
MRPL55-233ENST00000495899 ADD3Q9UEY8 706 aaKnown RBP14.38□□□□□ -0.11
MRPL55-233ENST00000495899 SLC12A7Q9Y666 1083 aa14.38□□□□□ -0.11
MRPL55-233ENST00000495899 SOWAHBA6NEL2 793 aa14.37□□□□□ -0.11
MRPL55-233ENST00000495899 NFIBO00712 420 aa14.37□□□□□ -0.11
MRPL55-233ENST00000495899 ZNF865P0CJ78 1059 aaPredicted RBP14.37□□□□□ -0.11
MRPL55-233ENST00000495899 IRX5P78411 483 aaPredicted RBP14.37□□□□□ -0.11
MRPL55-233ENST00000495899 BAATQ14032 418 aaPredicted RBP14.37□□□□□ -0.11
MRPL55-233ENST00000495899 COL9A3Q14050 684 aaPredicted RBP14.37□□□□□ -0.11
MRPL55-233ENST00000495899 TMEM132AQ24JP5 1023 aa14.37□□□□□ -0.11
MRPL55-233ENST00000495899 SYNE3Q6ZMZ3 975 aa14.37□□□□□ -0.11
MRPL55-233ENST00000495899 RNF207Q6ZRF8 634 aa14.37□□□□□ -0.11
MRPL55-233ENST00000495899 MCF2L2Q86YR7 1114 aa14.37□□□□□ -0.11
MRPL55-233ENST00000495899 ARRDC4Q8NCT1 418 aa14.37□□□□□ -0.11
MRPL55-233ENST00000495899 NUP133Q8WUM0 1156 aa14.37□□□□□ -0.11
MRPL55-233ENST00000495899 HTATIP2Q9BUP3 242 aa14.37□□□□□ -0.11
MRPL55-233ENST00000495899 USP26Q9BXU7 913 aa14.37□□□□□ -0.11
MRPL55-233ENST00000495899 MRPL11Q9Y3B7 192 aaKnown RBP14.37□□□□□ -0.11
MRPL55-233ENST00000495899 SNX14Q9Y5W7 946 aa14.37□□□□□ -0.11
MRPL55-233ENST00000495899 PNMA6FA0A0J9YX94 578 aa14.36□□□□□ -0.11
MRPL55-233ENST00000495899 PTPDC1A2A3K4 754 aa14.36□□□□□ -0.11
MRPL55-233ENST00000495899 PSMA5P28066 241 aa14.36□□□□□ -0.11
MRPL55-233ENST00000495899 ACVR2BQ13705 512 aa14.36□□□□□ -0.11
MRPL55-233ENST00000495899 USH1GQ495M9 461 aa14.36□□□□□ -0.11
MRPL55-233ENST00000495899 ARMCX2Q7L311 632 aa14.36□□□□□ -0.11
MRPL55-233ENST00000495899 CCDC144CPQ8IYA2 1237 aa14.36□□□□□ -0.11
MRPL55-233ENST00000495899 FBXL16Q8N461 479 aa14.36□□□□□ -0.11
MRPL55-233ENST00000495899 SAMD3Q8N6K7 520 aa14.36□□□□□ -0.11
MRPL55-233ENST00000495899 MORC4Q8TE76 937 aa14.36□□□□□ -0.11
MRPL55-233ENST00000495899 PAWRQ96IZ0 340 aaKnown RBP14.36□□□□□ -0.11
MRPL55-233ENST00000495899 OCEL1Q9H607 264 aa14.36□□□□□ -0.11
MRPL55-233ENST00000495899 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.36□□□□□ -0.11
MRPL55-233ENST00000495899 MAP3K20Q9NYL2 800 aaKnown RBP14.36□□□□□ -0.11
MRPL55-233ENST00000495899 FAM184BQ9ULE4 1060 aa14.36□□□□□ -0.11
MRPL55-233ENST00000495899 B4DLN1 442 aa14.35□□□□□ -0.11
MRPL55-233ENST00000495899 CYTH3O43739 400 aa14.35□□□□□ -0.11
MRPL55-233ENST00000495899 RARBP10826 455 aa14.35□□□□□ -0.11
MRPL55-233ENST00000495899 AKR1A1P14550 325 aa14.35□□□□□ -0.11
MRPL55-233ENST00000495899 TAL1P17542 331 aaPredicted RBP14.35□□□□□ -0.11
MRPL55-233ENST00000495899 MRPL12P52815 198 aaKnown RBP14.35□□□□□ -0.11
MRPL55-233ENST00000495899 RPS6P62753 249 aaKnown RBP14.35□□□□□ -0.11
MRPL55-233ENST00000495899 FANCBQ8NB91 859 aa14.35□□□□□ -0.11
MRPL55-233ENST00000495899 DNERQ8NFT8 737 aa14.35□□□□□ -0.11
MRPL55-233ENST00000495899 JAKMIP1Q96N16 626 aaKnown RBP14.35□□□□□ -0.11
MRPL55-233ENST00000495899 MPHOSPH6Q99547 160 aaKnown RBP14.35□□□□□ -0.11
MRPL55-233ENST00000495899 SPZ1Q9BXG8 430 aa14.35□□□□□ -0.11
MRPL55-233ENST00000495899 LRRC2Q9BYS8 371 aa14.35□□□□□ -0.11
MRPL55-233ENST00000495899 PCDHA1Q9Y5I3 950 aa14.35□□□□□ -0.11
MRPL55-233ENST00000495899 MKI67P46013 3256 aaKnown RBP14.34□□□□□ -0.11
MRPL55-233ENST00000495899 DNM1LO00429 736 aa14.34□□□□□ -0.11
MRPL55-233ENST00000495899 COL6A1P12109 1028 aa14.34□□□□□ -0.11
MRPL55-233ENST00000495899 RCAN1P53805 252 aa14.34□□□□□ -0.11
MRPL55-233ENST00000495899 GHRHRQ02643 423 aa14.34□□□□□ -0.11
MRPL55-233ENST00000495899 SLC35G1Q2M3R5 365 aa14.34□□□□□ -0.11
MRPL55-233ENST00000495899 BLOC1S2Q6QNY1 142 aa14.34□□□□□ -0.11
MRPL55-233ENST00000495899 PDCD7Q8N8D1 485 aaKnown RBP14.34□□□□□ -0.11
MRPL55-233ENST00000495899 PIGSQ96S52 555 aa14.34□□□□□ -0.11
MRPL55-233ENST00000495899 MYL10Q9BUA6 226 aa14.34□□□□□ -0.11
MRPL55-233ENST00000495899 C11orf49Q9H6J7 331 aa14.34□□□□□ -0.11
MRPL55-233ENST00000495899 ASTN1O14525 1302 aa14.34□□□□□ -0.11
MRPL55-233ENST00000495899 PPP1R11O60927 126 aaPredicted RBP14.33□□□□□ -0.12
MRPL55-233ENST00000495899 CALML3P27482 149 aa14.33□□□□□ -0.12
MRPL55-233ENST00000495899 ALDH5A1P51649 535 aaPredicted RBP14.33□□□□□ -0.12
MRPL55-233ENST00000495899 FGD1P98174 961 aa14.33□□□□□ -0.12
MRPL55-233ENST00000495899 PPP2R5BQ15173 497 aa14.33□□□□□ -0.12
MRPL55-233ENST00000495899 APOA5Q6Q788 366 aa14.33□□□□□ -0.12
MRPL55-233ENST00000495899 SLC30A10Q6XR72 485 aa14.33□□□□□ -0.12
MRPL55-233ENST00000495899 HOMER1Q86YM7 354 aa14.33□□□□□ -0.12
MRPL55-233ENST00000495899 DIS3LQ8TF46 1054 aaKnown RBP14.33□□□□□ -0.12
MRPL55-233ENST00000495899 RRP36Q96EU6 259 aaKnown RBP14.33□□□□□ -0.12
MRPL55-233ENST00000495899 KATNBL1Q9H079 304 aa14.33□□□□□ -0.12
MRPL55-233ENST00000495899 XPNPEP3Q9NQH7 507 aa14.33□□□□□ -0.12
MRPL55-233ENST00000495899 RBM28Q9NW13 759 aaKnown RBP14.33□□□□□ -0.12
MRPL55-233ENST00000495899 ZHX1Q9UKY1 873 aaPredicted RBP14.33□□□□□ -0.12
MRPL55-233ENST00000495899 ZBTB43O43298 467 aa14.32□□□□□ -0.12
MRPL55-233ENST00000495899 DUSP11O75319 330 aaKnown RBP14.32□□□□□ -0.12
MRPL55-233ENST00000495899 RPS6KB1P23443 525 aa14.32□□□□□ -0.12
MRPL55-233ENST00000495899 CCDC144BQ3MJ40 725 aa14.32□□□□□ -0.12
MRPL55-233ENST00000495899 IQSEC1Q6DN90 963 aa14.32□□□□□ -0.12
MRPL55-233ENST00000495899 RNF180Q86T96 592 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms