RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 CYP2C9P11712 490 aa15.99■□□□□ 0.15
COL1A1-209ENST00000495677 PTGS1P23219 599 aa15.99■□□□□ 0.15
COL1A1-209ENST00000495677 CPT1AP50416 773 aa15.99■□□□□ 0.15
COL1A1-209ENST00000495677 PTPN11Q06124 597 aaPredicted RBP15.99■□□□□ 0.15
COL1A1-209ENST00000495677 PPP4R3BQ5MIZ7 849 aa15.99■□□□□ 0.15
COL1A1-209ENST00000495677 NFRKBQ6P4R8 1299 aa15.99■□□□□ 0.15
COL1A1-209ENST00000495677 DEFB128Q7Z7B8 93 aa15.99■□□□□ 0.15
COL1A1-209ENST00000495677 HERC6Q8IVU3 1022 aa15.99■□□□□ 0.15
COL1A1-209ENST00000495677 FBXO16Q8IX29 292 aaPredicted RBP15.99■□□□□ 0.15
COL1A1-209ENST00000495677 STK11IPQ8N1F8 1099 aa15.99■□□□□ 0.15
COL1A1-209ENST00000495677 LRRC47Q8N1G4 583 aaKnown RBP15.99■□□□□ 0.15
COL1A1-209ENST00000495677 KBTBD3Q8NAB2 608 aa15.99■□□□□ 0.15
COL1A1-209ENST00000495677 PANK1Q8TE04 598 aa15.99■□□□□ 0.15
COL1A1-209ENST00000495677 APPBP2Q92624 585 aa15.99■□□□□ 0.15
COL1A1-209ENST00000495677 OSBP2Q969R2 916 aa15.99■□□□□ 0.15
COL1A1-209ENST00000495677 ZBTB40Q9NUA8 1239 aa15.99■□□□□ 0.15
COL1A1-209ENST00000495677 KIAA1217Q5T5P2 1943 aa15.99■□□□□ 0.15
COL1A1-209ENST00000495677 MYH7BA7E2Y1 1941 aa15.98■□□□□ 0.15
COL1A1-209ENST00000495677 PATL2C9JE40 543 aaKnown RBP15.98■□□□□ 0.15
COL1A1-209ENST00000495677 KPNA6O60684 536 aa15.98■□□□□ 0.15
COL1A1-209ENST00000495677 TSPY3P0CV98 308 aa15.98■□□□□ 0.15
COL1A1-209ENST00000495677 TSPY8P0CW00 308 aa15.98■□□□□ 0.15
COL1A1-209ENST00000495677 ALAS1P13196 640 aa15.98■□□□□ 0.15
COL1A1-209ENST00000495677 SLC1A4P43007 532 aa15.98■□□□□ 0.15
COL1A1-209ENST00000495677 GRB10Q13322 594 aa15.98■□□□□ 0.15
COL1A1-209ENST00000495677 KRT40Q6A162 431 aa15.98■□□□□ 0.15
COL1A1-209ENST00000495677 RCSD1Q6JBY9 416 aa15.98■□□□□ 0.15
COL1A1-209ENST00000495677 EEPD1Q7L9B9 569 aa15.98■□□□□ 0.15
COL1A1-209ENST00000495677 ARNTL2Q8WYA1 636 aa15.98■□□□□ 0.15
COL1A1-209ENST00000495677 KHSRPQ92945 711 aaKnown RBP eCLIP15.98■□□□□ 0.15
COL1A1-209ENST00000495677 MTG1Q9BT17 334 aaPredicted RBP15.98■□□□□ 0.15
COL1A1-209ENST00000495677 WDR11Q9BZH6 1224 aa15.98■□□□□ 0.15
COL1A1-209ENST00000495677 CERS4Q9HA82 394 aa15.98■□□□□ 0.15
COL1A1-209ENST00000495677 EPB41L4AQ9HCS5 686 aaPredicted RBP15.98■□□□□ 0.15
COL1A1-209ENST00000495677 ADD3Q9UEY8 706 aaKnown RBP15.98■□□□□ 0.15
COL1A1-209ENST00000495677 NKRFO15226 690 aaKnown RBP eCLIP15.97■□□□□ 0.15
COL1A1-209ENST00000495677 PRDM1O75626 825 aa15.97■□□□□ 0.15
COL1A1-209ENST00000495677 ZFYP08048 801 aaPredicted RBP15.97■□□□□ 0.15
COL1A1-209ENST00000495677 PDE4BQ07343 736 aa15.97■□□□□ 0.15
COL1A1-209ENST00000495677 LRRFIP1Q32MZ4 808 aaKnown RBP15.97■□□□□ 0.15
COL1A1-209ENST00000495677 MUM1L1Q5H9M0 696 aa15.97■□□□□ 0.15
COL1A1-209ENST00000495677 IFNL3Q8IZI9 196 aa15.97■□□□□ 0.15
COL1A1-209ENST00000495677 RETREG2Q8NC44 543 aa15.97■□□□□ 0.15
COL1A1-209ENST00000495677 DDX19BQ9UMR2 479 aa15.97■□□□□ 0.15
COL1A1-209ENST00000495677 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.96■□□□□ 0.15
COL1A1-209ENST00000495677 GPAA1O43292 621 aa15.96■□□□□ 0.15
COL1A1-209ENST00000495677 ARHGEF15O94989 841 aa15.96■□□□□ 0.15
COL1A1-209ENST00000495677 TFAP4Q01664 338 aa15.96■□□□□ 0.15
COL1A1-209ENST00000495677 BFSP2Q13515 415 aa15.96■□□□□ 0.15
COL1A1-209ENST00000495677 NBPF20Q3BBV1 942 aa15.96■□□□□ 0.15
COL1A1-209ENST00000495677 BRDTQ58F21 947 aaPredicted RBP15.96■□□□□ 0.15
COL1A1-209ENST00000495677 GPHNQ9NQX3 736 aaPredicted RBP15.96■□□□□ 0.15
COL1A1-209ENST00000495677 PRR12Q9ULL5 1215 aa15.96■□□□□ 0.15
COL1A1-209ENST00000495677 DDX49Q9Y6V7 483 aaKnown RBP15.96■□□□□ 0.15
COL1A1-209ENST00000495677 A6NJR5 290 aa15.95■□□□□ 0.14
COL1A1-209ENST00000495677 PRR33A8MZF0 331 aa15.95■□□□□ 0.14
COL1A1-209ENST00000495677 RNF113AO15541 343 aaKnown RBP15.95■□□□□ 0.14
COL1A1-209ENST00000495677 PARNO95453 639 aaKnown RBP15.95■□□□□ 0.14
COL1A1-209ENST00000495677 ICAM1P05362 532 aa15.95■□□□□ 0.14
COL1A1-209ENST00000495677 MCCP23508 829 aa15.95■□□□□ 0.14
COL1A1-209ENST00000495677 TDO2P48775 406 aa15.95■□□□□ 0.14
COL1A1-209ENST00000495677 ALDH5A1P51649 535 aaPredicted RBP15.95■□□□□ 0.14
COL1A1-209ENST00000495677 LRRCC1Q9C099 1032 aa15.95■□□□□ 0.14
COL1A1-209ENST00000495677 CHMP4BQ9H444 224 aaKnown RBP15.95■□□□□ 0.14
COL1A1-209ENST00000495677 CD320Q9NPF0 282 aa15.95■□□□□ 0.14
COL1A1-209ENST00000495677 ECHDC1Q9NTX5 307 aa15.95■□□□□ 0.14
COL1A1-209ENST00000495677 MICAL3Q7RTP6 2002 aa15.94■□□□□ 0.14
COL1A1-209ENST00000495677 SLC3A2P08195 630 aaKnown RBP15.94■□□□□ 0.14
COL1A1-209ENST00000495677 NOVP48745 357 aa15.94■□□□□ 0.14
COL1A1-209ENST00000495677 IKQ13123 557 aaPredicted RBP15.94■□□□□ 0.14
COL1A1-209ENST00000495677 BTNL9Q6UXG8 535 aa15.94■□□□□ 0.14
COL1A1-209ENST00000495677 NSMFQ6X4W1 530 aa15.94■□□□□ 0.14
COL1A1-209ENST00000495677 FTOQ9C0B1 505 aaKnown RBP eCLIP15.94■□□□□ 0.14
COL1A1-209ENST00000495677 CCPG1Q9ULG6 757 aa15.94■□□□□ 0.14
COL1A1-209ENST00000495677 RAD50Q92878 1312 aa15.94■□□□□ 0.14
COL1A1-209ENST00000495677 APPP05067 770 aa15.93■□□□□ 0.14
COL1A1-209ENST00000495677 MYL3P08590 195 aa15.93■□□□□ 0.14
COL1A1-209ENST00000495677 BAATQ14032 418 aaPredicted RBP15.93■□□□□ 0.14
COL1A1-209ENST00000495677 KCTD1Q719H9 257 aa15.93■□□□□ 0.14
COL1A1-209ENST00000495677 FAM178BQ8IXR5 827 aa15.93■□□□□ 0.14
COL1A1-209ENST00000495677 OR6J1Q8NGC5 347 aa15.93■□□□□ 0.14
COL1A1-209ENST00000495677 CAGE1Q8TC20 777 aa15.93■□□□□ 0.14
COL1A1-209ENST00000495677 PURBQ96QR8 312 aaKnown RBP15.93■□□□□ 0.14
COL1A1-209ENST00000495677 NACAP1Q9BZK3 213 aa15.93■□□□□ 0.14
COL1A1-209ENST00000495677 BCL11AQ9H165 835 aa15.93■□□□□ 0.14
COL1A1-209ENST00000495677 RANBP17Q9H2T7 1088 aaKnown RBP15.93■□□□□ 0.14
COL1A1-209ENST00000495677 MYH6P13533 1939 aa15.93■□□□□ 0.14
COL1A1-209ENST00000495677 KCNJ6P48051 423 aa15.92■□□□□ 0.14
COL1A1-209ENST00000495677 ERVK-21P61565 698 aa15.92■□□□□ 0.14
COL1A1-209ENST00000495677 RBL2Q08999 1139 aa15.92■□□□□ 0.14
COL1A1-209ENST00000495677 GPNMBQ14956 572 aa15.92■□□□□ 0.14
COL1A1-209ENST00000495677 LEXMQ3ZCV2 418 aa15.92■□□□□ 0.14
COL1A1-209ENST00000495677 FAM47CQ5HY64 1035 aa15.92■□□□□ 0.14
COL1A1-209ENST00000495677 SESTD1Q86VW0 696 aa15.92■□□□□ 0.14
COL1A1-209ENST00000495677 AFAP1L1Q8TED9 768 aa15.92■□□□□ 0.14
COL1A1-209ENST00000495677 SUGCTQ9HAC7 445 aa15.92■□□□□ 0.14
COL1A1-209ENST00000495677 IL17RBQ9NRM6 502 aa15.92■□□□□ 0.14
COL1A1-209ENST00000495677 PNMA2Q9UL42 364 aa15.92■□□□□ 0.14
COL1A1-209ENST00000495677 NLRC5Q86WI3 1866 aa15.91■□□□□ 0.14
COL1A1-209ENST00000495677 CXCL10P02778 98 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms