RNA–Protein interactions for RNA: ENST00000495603.2

SCAP-214, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-214ENST00000495603 KLHDC9Q8NEP7 349 aa13.17□□□□□ -0.3
SCAP-214ENST00000495603 NUP133Q8WUM0 1156 aa13.17□□□□□ -0.3
SCAP-214ENST00000495603 FERMT2Q96AC1 680 aa13.17□□□□□ -0.3
SCAP-214ENST00000495603 TCEANC2Q96MN5 208 aa13.17□□□□□ -0.3
SCAP-214ENST00000495603 NEK1Q96PY6 1258 aa13.17□□□□□ -0.3
SCAP-214ENST00000495603 MAP3K14Q99558 947 aa13.17□□□□□ -0.3
SCAP-214ENST00000495603 AMNQ9BXJ7 453 aa13.17□□□□□ -0.3
SCAP-214ENST00000495603 PRO3102Q9H379 93 aa13.17□□□□□ -0.3
SCAP-214ENST00000495603 ADD3Q9UEY8 706 aaKnown RBP13.17□□□□□ -0.3
SCAP-214ENST00000495603 PHF24Q9UPV7 400 aa13.17□□□□□ -0.3
SCAP-214ENST00000495603 GNEQ9Y223 722 aaKnown RBP13.17□□□□□ -0.3
SCAP-214ENST00000495603 LOC102724159A0A0B4J2E5 919 aa13.16□□□□□ -0.3
SCAP-214ENST00000495603 SMPD1P17405 629 aa13.16□□□□□ -0.3
SCAP-214ENST00000495603 RXRAP19793 462 aa13.16□□□□□ -0.3
SCAP-214ENST00000495603 EDNRBP24530 442 aa13.16□□□□□ -0.3
SCAP-214ENST00000495603 HSPA4P34932 840 aa13.16□□□□□ -0.3
SCAP-214ENST00000495603 GJA9P57773 515 aa13.16□□□□□ -0.3
SCAP-214ENST00000495603 SNX17Q15036 470 aa13.16□□□□□ -0.3
SCAP-214ENST00000495603 PWP2Q15269 919 aaKnown RBP13.16□□□□□ -0.3
SCAP-214ENST00000495603 SLC39A5Q6ZMH5 540 aa13.16□□□□□ -0.3
SCAP-214ENST00000495603 RNF180Q86T96 592 aa13.16□□□□□ -0.3
SCAP-214ENST00000495603 SGMS1Q86VZ5 419 aa13.16□□□□□ -0.3
SCAP-214ENST00000495603 HOMER1Q86YM7 354 aa13.16□□□□□ -0.3
SCAP-214ENST00000495603 RAB11FIP4Q86YS3 637 aa13.16□□□□□ -0.3
SCAP-214ENST00000495603 SYTL5Q8TDW5 730 aaPredicted RBP13.16□□□□□ -0.3
SCAP-214ENST00000495603 TAAR1Q96RJ0 339 aa13.16□□□□□ -0.3
SCAP-214ENST00000495603 UPF3AQ9H1J1 476 aaKnown RBP13.16□□□□□ -0.3
SCAP-214ENST00000495603 ZMYND8Q9ULU4 1186 aaPredicted RBP13.16□□□□□ -0.3
SCAP-214ENST00000495603 MRPL11Q9Y3B7 192 aaKnown RBP13.16□□□□□ -0.3
SCAP-214ENST00000495603 BAZ2BQ9UIF8 2168 aaKnown RBP13.15□□□□□ -0.3
SCAP-214ENST00000495603 A0A1W2PQ45 241 aaPredicted RBP13.15□□□□□ -0.3
SCAP-214ENST00000495603 A0A1W2PQY0 241 aa13.15□□□□□ -0.3
SCAP-214ENST00000495603 CCDC69A6NI79 296 aa13.15□□□□□ -0.3
SCAP-214ENST00000495603 PLEKHA8P1O95397 391 aa13.15□□□□□ -0.3
SCAP-214ENST00000495603 CPA1P15085 419 aa13.15□□□□□ -0.3
SCAP-214ENST00000495603 SYN1P17600 705 aa13.15□□□□□ -0.3
SCAP-214ENST00000495603 CST5P28325 142 aaPredicted RBP13.15□□□□□ -0.3
SCAP-214ENST00000495603 RTP1P59025 263 aa13.15□□□□□ -0.3
SCAP-214ENST00000495603 NKX3-2P78367 333 aa13.15□□□□□ -0.3
SCAP-214ENST00000495603 GHRHRQ02643 423 aa13.15□□□□□ -0.3
SCAP-214ENST00000495603 TNFAIP2Q03169 654 aa13.15□□□□□ -0.3
SCAP-214ENST00000495603 CHRDL2Q6WN34 429 aa13.15□□□□□ -0.3
SCAP-214ENST00000495603 NFXL1Q6ZNB6 911 aa13.15□□□□□ -0.3
SCAP-214ENST00000495603 DHX32Q7L7V1 743 aaKnown RBP13.15□□□□□ -0.3
SCAP-214ENST00000495603 CMTR1Q8N1G2 835 aaKnown RBP13.15□□□□□ -0.3
SCAP-214ENST00000495603 TMTC2Q8N394 836 aa13.15□□□□□ -0.3
SCAP-214ENST00000495603 DNERQ8NFT8 737 aa13.15□□□□□ -0.3
SCAP-214ENST00000495603 MAF1Q9H063 256 aa13.15□□□□□ -0.3
SCAP-214ENST00000495603 VTA1Q9NP79 307 aa13.15□□□□□ -0.3
SCAP-214ENST00000495603 PCDHA1Q9Y5I3 950 aa13.15□□□□□ -0.3
SCAP-214ENST00000495603 SNX14Q9Y5W7 946 aa13.15□□□□□ -0.3
SCAP-214ENST00000495603 LTBP2Q14767 1821 aa13.15□□□□□ -0.3
SCAP-214ENST00000495603 CEP290O15078 2479 aa13.14□□□□□ -0.31
SCAP-214ENST00000495603 PNMA6FA0A0J9YX94 578 aa13.14□□□□□ -0.31
SCAP-214ENST00000495603 RBM47A0AV96 593 aaKnown RBP13.14□□□□□ -0.31
SCAP-214ENST00000495603 C6orf222P0C671 652 aaPredicted RBP13.14□□□□□ -0.31
SCAP-214ENST00000495603 HSD17B4P51659 736 aa13.14□□□□□ -0.31
SCAP-214ENST00000495603 ACLYP53396 1101 aa13.14□□□□□ -0.31
SCAP-214ENST00000495603 KCNA10Q16322 511 aa13.14□□□□□ -0.31
SCAP-214ENST00000495603 HABP4Q5JVS0 413 aaKnown RBP13.14□□□□□ -0.31
SCAP-214ENST00000495603 C1orf53Q5VUE5 145 aa13.14□□□□□ -0.31
SCAP-214ENST00000495603 MCF2L2Q86YR7 1114 aa13.14□□□□□ -0.31
SCAP-214ENST00000495603 SRBD1Q8N5C6 995 aaKnown RBP13.14□□□□□ -0.31
SCAP-214ENST00000495603 CTCFLQ8NI51 663 aaPredicted RBP13.14□□□□□ -0.31
SCAP-214ENST00000495603 TSEN34Q9BSV6 310 aaKnown RBP13.14□□□□□ -0.31
SCAP-214ENST00000495603 SPZ1Q9BXG8 430 aa13.14□□□□□ -0.31
SCAP-214ENST00000495603 RBM27Q9P2N5 1060 aaKnown RBP13.14□□□□□ -0.31
SCAP-214ENST00000495603 BRPF3Q9ULD4 1205 aa13.14□□□□□ -0.31
SCAP-214ENST00000495603 SLC12A7Q9Y666 1083 aa13.14□□□□□ -0.31
SCAP-214ENST00000495603 CFBP00751 764 aa13.13□□□□□ -0.31
SCAP-214ENST00000495603 SMARCA1P28370 1054 aa13.13□□□□□ -0.31
SCAP-214ENST00000495603 KIF5BP33176 963 aa13.13□□□□□ -0.31
SCAP-214ENST00000495603 BEX3Q00994 111 aa13.13□□□□□ -0.31
SCAP-214ENST00000495603 KRT32Q14532 448 aa13.13□□□□□ -0.31
SCAP-214ENST00000495603 TRIM60Q495X7 471 aa13.13□□□□□ -0.31
SCAP-214ENST00000495603 IQSEC1Q6DN90 963 aa13.13□□□□□ -0.31
SCAP-214ENST00000495603 TLK2Q86UE8 772 aa13.13□□□□□ -0.31
SCAP-214ENST00000495603 FANCBQ8NB91 859 aa13.13□□□□□ -0.31
SCAP-214ENST00000495603 PIBF1Q8WXW3 757 aa13.13□□□□□ -0.31
SCAP-214ENST00000495603 GDF15Q99988 308 aa13.13□□□□□ -0.31
SCAP-214ENST00000495603 ATP11BQ9Y2G3 1177 aa13.13□□□□□ -0.31
SCAP-214ENST00000495603 KIAA1217Q5T5P2 1943 aa13.13□□□□□ -0.31
SCAP-214ENST00000495603 MOXD2PA6NHM9 499 aa13.12□□□□□ -0.31
SCAP-214ENST00000495603 REC8O95072 547 aa13.12□□□□□ -0.31
SCAP-214ENST00000495603 ASGR1P07306 291 aa13.12□□□□□ -0.31
SCAP-214ENST00000495603 CALM1P0DP23 149 aa13.12□□□□□ -0.31
SCAP-214ENST00000495603 CALM2P0DP24 149 aa13.12□□□□□ -0.31
SCAP-214ENST00000495603 CALM3P0DP25 149 aa13.12□□□□□ -0.31
SCAP-214ENST00000495603 HOXA13P31271 388 aaPredicted RBP13.12□□□□□ -0.31
SCAP-214ENST00000495603 PDE4DQ08499 809 aa13.12□□□□□ -0.31
SCAP-214ENST00000495603 DUSP28Q4G0W2 176 aa13.12□□□□□ -0.31
SCAP-214ENST00000495603 GNASQ5JWF2 1037 aa13.12□□□□□ -0.31
SCAP-214ENST00000495603 APOA5Q6Q788 366 aa13.12□□□□□ -0.31
SCAP-214ENST00000495603 MICU3Q86XE3 530 aa13.12□□□□□ -0.31
SCAP-214ENST00000495603 NSUN6Q8TEA1 469 aaKnown RBP13.12□□□□□ -0.31
SCAP-214ENST00000495603 JAKMIP1Q96N16 626 aaKnown RBP13.12□□□□□ -0.31
SCAP-214ENST00000495603 RMDN3Q96TC7 470 aa13.12□□□□□ -0.31
SCAP-214ENST00000495603 WDR11Q9BZH6 1224 aa13.12□□□□□ -0.31
SCAP-214ENST00000495603 PXMP2Q9NR77 195 aa13.12□□□□□ -0.31
SCAP-214ENST00000495603 LAMA2P24043 3122 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms