RNA–Protein interactions for RNA: ENST00000495532.1

HLA-DOA-206, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-206ENST00000495532 NBPF20Q3BBV1 942 aa13.52□□□□□ -0.25
HLA-DOA-206ENST00000495532 PUS10Q3MIT2 529 aaKnown RBP13.52□□□□□ -0.25
HLA-DOA-206ENST00000495532 FAM47CQ5HY64 1035 aa13.52□□□□□ -0.25
HLA-DOA-206ENST00000495532 KIAA1211Q6ZU35 1233 aa13.52□□□□□ -0.25
HLA-DOA-206ENST00000495532 MORC4Q8TE76 937 aa13.52□□□□□ -0.25
HLA-DOA-206ENST00000495532 MTG1Q9BT17 334 aaPredicted RBP13.52□□□□□ -0.25
HLA-DOA-206ENST00000495532 VTA1Q9NP79 307 aa13.52□□□□□ -0.25
HLA-DOA-206ENST00000495532 ATG2AQ2TAZ0 1938 aa13.52□□□□□ -0.25
HLA-DOA-206ENST00000495532 SPTBN4Q9H254 2564 aa13.52□□□□□ -0.25
HLA-DOA-206ENST00000495532 C5orf42Q9H799 3197 aa13.52□□□□□ -0.25
HLA-DOA-206ENST00000495532 C19orf67A6NJJ6 358 aa13.51□□□□□ -0.25
HLA-DOA-206ENST00000495532 H3BQ06 376 aaPredicted RBP13.51□□□□□ -0.25
HLA-DOA-206ENST00000495532 ST18O60284 1047 aa13.51□□□□□ -0.25
HLA-DOA-206ENST00000495532 GJB5O95377 273 aa13.51□□□□□ -0.25
HLA-DOA-206ENST00000495532 BFSP2Q13515 415 aa13.51□□□□□ -0.25
HLA-DOA-206ENST00000495532 NFRKBQ6P4R8 1299 aa13.51□□□□□ -0.25
HLA-DOA-206ENST00000495532 PRSS33Q8NF86 280 aa13.51□□□□□ -0.25
HLA-DOA-206ENST00000495532 FRAT1Q92837 279 aaPredicted RBP13.51□□□□□ -0.25
HLA-DOA-206ENST00000495532 MKL1Q969V6 931 aa13.51□□□□□ -0.25
HLA-DOA-206ENST00000495532 ZBED2Q9BTP6 218 aa13.51□□□□□ -0.25
HLA-DOA-206ENST00000495532 CLIP2Q9UDT6 1046 aa13.51□□□□□ -0.25
HLA-DOA-206ENST00000495532 EXOC6BQ9Y2D4 811 aa13.51□□□□□ -0.25
HLA-DOA-206ENST00000495532 CACNA1HO95180 2353 aa13.51□□□□□ -0.25
HLA-DOA-206ENST00000495532 KMT2EQ8IZD2 1858 aa13.5□□□□□ -0.25
HLA-DOA-206ENST00000495532 MYO7AQ13402 2215 aa13.5□□□□□ -0.25
HLA-DOA-206ENST00000495532 FDX1P10109 184 aa13.5□□□□□ -0.25
HLA-DOA-206ENST00000495532 CPT1AP50416 773 aa13.5□□□□□ -0.25
HLA-DOA-206ENST00000495532 TCTN1Q2MV58 587 aa13.5□□□□□ -0.25
HLA-DOA-206ENST00000495532 LRRFIP1Q32MZ4 808 aaKnown RBP13.5□□□□□ -0.25
HLA-DOA-206ENST00000495532 RPAP2Q8IXW5 612 aaPredicted RBP13.5□□□□□ -0.25
HLA-DOA-206ENST00000495532 GMCL1P1Q8NEA9 526 aa13.5□□□□□ -0.25
HLA-DOA-206ENST00000495532 DDRGK1Q96HY6 314 aa13.5□□□□□ -0.25
HLA-DOA-206ENST00000495532 MFSD14AQ96MC6 490 aa13.5□□□□□ -0.25
HLA-DOA-206ENST00000495532 TRERF1Q96PN7 1200 aa13.5□□□□□ -0.25
HLA-DOA-206ENST00000495532 PURBQ96QR8 312 aaKnown RBP13.5□□□□□ -0.25
HLA-DOA-206ENST00000495532 CTAGE1Q96RT6 745 aa13.5□□□□□ -0.25
HLA-DOA-206ENST00000495532 RAD9AQ99638 391 aa13.5□□□□□ -0.25
HLA-DOA-206ENST00000495532 IL1RAPL2Q9NP60 686 aa13.5□□□□□ -0.25
HLA-DOA-206ENST00000495532 CYP39A1Q9NYL5 469 aa13.5□□□□□ -0.25
HLA-DOA-206ENST00000495532 ARPP21Q9UBL0 812 aaPredicted RBP13.5□□□□□ -0.25
HLA-DOA-206ENST00000495532 PRKAG3Q9UGI9 489 aa13.5□□□□□ -0.25
HLA-DOA-206ENST00000495532 SLC4A4Q9Y6R1 1079 aa13.5□□□□□ -0.25
HLA-DOA-206ENST00000495532 MICAL3Q7RTP6 2002 aa13.5□□□□□ -0.25
HLA-DOA-206ENST00000495532 NLRC5Q86WI3 1866 aa13.5□□□□□ -0.25
HLA-DOA-206ENST00000495532 PTPN11Q06124 597 aaPredicted RBP13.49□□□□□ -0.25
HLA-DOA-206ENST00000495532 COL19A1Q14993 1142 aa13.49□□□□□ -0.25
HLA-DOA-206ENST00000495532 TKFCQ3LXA3 575 aa13.49□□□□□ -0.25
HLA-DOA-206ENST00000495532 MUM1L1Q5H9M0 696 aa13.49□□□□□ -0.25
HLA-DOA-206ENST00000495532 ERC1Q8IUD2 1116 aa13.49□□□□□ -0.25
HLA-DOA-206ENST00000495532 LRRC47Q8N1G4 583 aaKnown RBP13.49□□□□□ -0.25
HLA-DOA-206ENST00000495532 AFAP1L1Q8TED9 768 aa13.49□□□□□ -0.25
HLA-DOA-206ENST00000495532 CEP95Q96GE4 821 aa13.49□□□□□ -0.25
HLA-DOA-206ENST00000495532 C17orf80Q9BSJ5 609 aa13.49□□□□□ -0.25
HLA-DOA-206ENST00000495532 WDR11Q9BZH6 1224 aa13.49□□□□□ -0.25
HLA-DOA-206ENST00000495532 SYNPO2Q9UMS6 1093 aa13.49□□□□□ -0.25
HLA-DOA-206ENST00000495532 RBM47A0AV96 593 aaKnown RBP13.48□□□□□ -0.25
HLA-DOA-206ENST00000495532 TMEM232C9JQI7 657 aa13.48□□□□□ -0.25
HLA-DOA-206ENST00000495532 RBAK-RBAKDNI3L0D1 243 aa13.48□□□□□ -0.25
HLA-DOA-206ENST00000495532 CXCL10P02778 98 aa13.48□□□□□ -0.25
HLA-DOA-206ENST00000495532 BMP3P12645 472 aa13.48□□□□□ -0.25
HLA-DOA-206ENST00000495532 ALAS1P13196 640 aa13.48□□□□□ -0.25
HLA-DOA-206ENST00000495532 IRS1P35568 1242 aa13.48□□□□□ -0.25
HLA-DOA-206ENST00000495532 STAT2P52630 851 aa13.48□□□□□ -0.25
HLA-DOA-206ENST00000495532 CNKSR3Q6P9H4 555 aa13.48□□□□□ -0.25
HLA-DOA-206ENST00000495532 ADHFE1Q8IWW8 467 aa13.48□□□□□ -0.25
HLA-DOA-206ENST00000495532 STK11IPQ8N1F8 1099 aa13.48□□□□□ -0.25
HLA-DOA-206ENST00000495532 OR6J1Q8NGC5 347 aa13.48□□□□□ -0.25
HLA-DOA-206ENST00000495532 CAGE1Q8TC20 777 aa13.48□□□□□ -0.25
HLA-DOA-206ENST00000495532 MRPL38Q96DV4 380 aaKnown RBP13.48□□□□□ -0.25
HLA-DOA-206ENST00000495532 GPHNQ9NQX3 736 aaPredicted RBP13.48□□□□□ -0.25
HLA-DOA-206ENST00000495532 PAG1Q9NWQ8 432 aa13.48□□□□□ -0.25
HLA-DOA-206ENST00000495532 MTMR4Q9NYA4 1195 aa13.48□□□□□ -0.25
HLA-DOA-206ENST00000495532 ZFHX2Q9C0A1 2572 aaPredicted RBP13.47□□□□□ -0.25
HLA-DOA-206ENST00000495532 NBNO60934 754 aa13.47□□□□□ -0.25
HLA-DOA-206ENST00000495532 UBE3CQ15386 1083 aa13.47□□□□□ -0.25
HLA-DOA-206ENST00000495532 SBK1Q52WX2 424 aa13.47□□□□□ -0.25
HLA-DOA-206ENST00000495532 IER5LQ5T953 404 aa13.47□□□□□ -0.25
HLA-DOA-206ENST00000495532 SLFN13Q68D06 897 aa13.47□□□□□ -0.25
HLA-DOA-206ENST00000495532 CEP85Q6P2H3 762 aa13.47□□□□□ -0.25
HLA-DOA-206ENST00000495532 FBXO22Q8NEZ5 403 aa13.47□□□□□ -0.25
HLA-DOA-206ENST00000495532 RHPN1Q8TCX5 695 aa13.47□□□□□ -0.25
HLA-DOA-206ENST00000495532 PABPC5Q96DU9 382 aaKnown RBP13.47□□□□□ -0.25
HLA-DOA-206ENST00000495532 PUS7LQ9H0K6 701 aaKnown RBP13.47□□□□□ -0.25
HLA-DOA-206ENST00000495532 MKNK2Q9HBH9 465 aa13.47□□□□□ -0.25
HLA-DOA-206ENST00000495532 MUTYHQ9UIF7 546 aa13.47□□□□□ -0.25
HLA-DOA-206ENST00000495532 NOD1Q9Y239 953 aa13.47□□□□□ -0.25
HLA-DOA-206ENST00000495532 ABHD14A-ACY1A0A1B0GW23 586 aa13.46□□□□□ -0.25
HLA-DOA-206ENST00000495532 A6NJR5 290 aa13.46□□□□□ -0.25
HLA-DOA-206ENST00000495532 TTLL1O95922 423 aa13.46□□□□□ -0.25
HLA-DOA-206ENST00000495532 SELPP16109 830 aa13.46□□□□□ -0.25
HLA-DOA-206ENST00000495532 ALDH5A1P51649 535 aaPredicted RBP13.46□□□□□ -0.25
HLA-DOA-206ENST00000495532 PTPN5P54829 565 aa13.46□□□□□ -0.25
HLA-DOA-206ENST00000495532 RBL2Q08999 1139 aa13.46□□□□□ -0.25
HLA-DOA-206ENST00000495532 PTGISQ16647 500 aa13.46□□□□□ -0.25
HLA-DOA-206ENST00000495532 TIGD5Q53EQ6 642 aa13.46□□□□□ -0.25
HLA-DOA-206ENST00000495532 HERC4Q5GLZ8 1057 aaPredicted RBP13.46□□□□□ -0.25
HLA-DOA-206ENST00000495532 FAM117BQ6P1L5 589 aa13.46□□□□□ -0.25
HLA-DOA-206ENST00000495532 NSMFQ6X4W1 530 aa13.46□□□□□ -0.25
HLA-DOA-206ENST00000495532 LRRC8DQ7L1W4 858 aa13.46□□□□□ -0.25
HLA-DOA-206ENST00000495532 CCDC155Q8N6L0 562 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms