RNA–Protein interactions for RNA: ENST00000494913.5

COL20A1-207, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 2

Gene COL20A1, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-207ENST00000494913 MRPL11Q9Y3B7 192 aaKnown RBP20.93■□□□□ 0.94
COL20A1-207ENST00000494913 LOC102724159A0A0B4J2E5 919 aa20.92■□□□□ 0.94
COL20A1-207ENST00000494913 ZBTB5O15062 677 aa20.92■□□□□ 0.94
COL20A1-207ENST00000494913 MAGEA10P43363 369 aaPredicted RBP20.92■□□□□ 0.94
COL20A1-207ENST00000494913 SNX17Q15036 470 aa20.92■□□□□ 0.94
COL20A1-207ENST00000494913 PWP2Q15269 919 aaKnown RBP20.92■□□□□ 0.94
COL20A1-207ENST00000494913 TRIM60Q495X7 471 aa20.92■□□□□ 0.94
COL20A1-207ENST00000494913 GNASQ5JWF2 1037 aa20.92■□□□□ 0.94
COL20A1-207ENST00000494913 RNF20Q5VTR2 975 aa20.92■□□□□ 0.94
COL20A1-207ENST00000494913 CCSAPQ6IQ19 270 aaPredicted RBP20.92■□□□□ 0.94
COL20A1-207ENST00000494913 MCF2L2Q86YR7 1114 aa20.92■□□□□ 0.94
COL20A1-207ENST00000494913 MTMR8Q96EF0 704 aa20.92■□□□□ 0.94
COL20A1-207ENST00000494913 GDF15Q99988 308 aa20.92■□□□□ 0.94
COL20A1-207ENST00000494913 MTA3Q9BTC8 594 aa20.92■□□□□ 0.94
COL20A1-207ENST00000494913 AMNQ9BXJ7 453 aa20.92■□□□□ 0.94
COL20A1-207ENST00000494913 MOXD2PA6NHM9 499 aa20.91■□□□□ 0.94
COL20A1-207ENST00000494913 SMPD1P17405 629 aa20.91■□□□□ 0.94
COL20A1-207ENST00000494913 CST5P28325 142 aaPredicted RBP20.91■□□□□ 0.94
COL20A1-207ENST00000494913 PDE4DQ08499 809 aa20.91■□□□□ 0.94
COL20A1-207ENST00000494913 SLC35G1Q2M3R5 365 aa20.91■□□□□ 0.94
COL20A1-207ENST00000494913 HOMER1Q86YM7 354 aa20.91■□□□□ 0.94
COL20A1-207ENST00000494913 PCSK9Q8NBP7 692 aaKnown RBP20.91■□□□□ 0.94
COL20A1-207ENST00000494913 DNERQ8NFT8 737 aa20.91■□□□□ 0.94
COL20A1-207ENST00000494913 TMEM87BQ96K49 555 aa20.91■□□□□ 0.94
COL20A1-207ENST00000494913 MYL10Q9BUA6 226 aa20.91■□□□□ 0.94
COL20A1-207ENST00000494913 RIOX1Q9H6W3 641 aa20.91■□□□□ 0.94
COL20A1-207ENST00000494913 GNEQ9Y223 722 aaKnown RBP20.91■□□□□ 0.94
COL20A1-207ENST00000494913 PTGS1P23219 599 aa20.9■□□□□ 0.94
COL20A1-207ENST00000494913 TMEM63BQ5T3F8 832 aa20.9■□□□□ 0.94
COL20A1-207ENST00000494913 C1orf53Q5VUE5 145 aa20.9■□□□□ 0.94
COL20A1-207ENST00000494913 NFXL1Q6ZNB6 911 aa20.9■□□□□ 0.94
COL20A1-207ENST00000494913 TLK2Q86UE8 772 aa20.9■□□□□ 0.94
COL20A1-207ENST00000494913 ZNF654Q8IZM8 581 aa20.9■□□□□ 0.94
COL20A1-207ENST00000494913 TMTC2Q8N394 836 aa20.9■□□□□ 0.94
COL20A1-207ENST00000494913 PIGSQ96S52 555 aa20.9■□□□□ 0.94
COL20A1-207ENST00000494913 MPHOSPH6Q99547 160 aaKnown RBP20.9■□□□□ 0.94
COL20A1-207ENST00000494913 MAF1Q9H063 256 aa20.9■□□□□ 0.94
COL20A1-207ENST00000494913 PRKAG2Q9UGJ0 569 aa20.9■□□□□ 0.94
COL20A1-207ENST00000494913 PCDHA1Q9Y5I3 950 aa20.9■□□□□ 0.94
COL20A1-207ENST00000494913 MYH6P13533 1939 aa20.9■□□□□ 0.94
COL20A1-207ENST00000494913 BAZ2BQ9UIF8 2168 aaKnown RBP20.9■□□□□ 0.94
COL20A1-207ENST00000494913 B4DLN1 442 aa20.89■□□□□ 0.94
COL20A1-207ENST00000494913 SH2B2O14492 632 aaPredicted RBP20.89■□□□□ 0.94
COL20A1-207ENST00000494913 CTAGE5O15320 804 aa20.89■□□□□ 0.94
COL20A1-207ENST00000494913 DYNC1LI2O43237 492 aaPredicted RBP20.89■□□□□ 0.94
COL20A1-207ENST00000494913 PPP1R11O60927 126 aaPredicted RBP20.89■□□□□ 0.94
COL20A1-207ENST00000494913 ASGR1P07306 291 aa20.89■□□□□ 0.94
COL20A1-207ENST00000494913 MRPL12P52815 198 aaKnown RBP20.89■□□□□ 0.94
COL20A1-207ENST00000494913 BEX3Q00994 111 aa20.89■□□□□ 0.94
COL20A1-207ENST00000494913 TLE2Q04725 743 aa20.89■□□□□ 0.94
COL20A1-207ENST00000494913 SYTL5Q8TDW5 730 aaPredicted RBP20.89■□□□□ 0.94
COL20A1-207ENST00000494913 VTI1AQ96AJ9 217 aa20.89■□□□□ 0.94
COL20A1-207ENST00000494913 LRRC2Q9BYS8 371 aa20.89■□□□□ 0.94
COL20A1-207ENST00000494913 AP5M1Q9H0R1 490 aa20.89■□□□□ 0.94
COL20A1-207ENST00000494913 STARD7Q9NQZ5 370 aa20.89■□□□□ 0.94
COL20A1-207ENST00000494913 PPP4R2Q9NY27 417 aa20.89■□□□□ 0.94
COL20A1-207ENST00000494913 CCDC69A6NI79 296 aa20.88■□□□□ 0.93
COL20A1-207ENST00000494913 CYTH3O43739 400 aa20.88■□□□□ 0.93
COL20A1-207ENST00000494913 CFBP00751 764 aa20.88■□□□□ 0.93
COL20A1-207ENST00000494913 BMP8BP34820 402 aa20.88■□□□□ 0.93
COL20A1-207ENST00000494913 FXR1P51114 621 aaKnown RBP eCLIP20.88■□□□□ 0.93
COL20A1-207ENST00000494913 MDM2Q00987 491 aaPredicted RBP20.88■□□□□ 0.93
COL20A1-207ENST00000494913 CTCFLQ8NI51 663 aaPredicted RBP20.88■□□□□ 0.93
COL20A1-207ENST00000494913 TAAR1Q96RJ0 339 aa20.88■□□□□ 0.93
COL20A1-207ENST00000494913 MAP3K14Q99558 947 aa20.88■□□□□ 0.93
COL20A1-207ENST00000494913 WDR11Q9BZH6 1224 aa20.88■□□□□ 0.93
COL20A1-207ENST00000494913 COL20A1Q9P218 1284 aa20.88■□□□□ 0.93
COL20A1-207ENST00000494913 DDAH1O94760 285 aa20.88■□□□□ 0.93
COL20A1-207ENST00000494913 SLC34A2O95436 690 aa20.88■□□□□ 0.93
COL20A1-207ENST00000494913 EDNRBP24530 442 aa20.88■□□□□ 0.93
COL20A1-207ENST00000494913 LIFRP42702 1097 aa20.88■□□□□ 0.93
COL20A1-207ENST00000494913 NKX3-2P78367 333 aa20.88■□□□□ 0.93
COL20A1-207ENST00000494913 DUSP28Q4G0W2 176 aa20.88■□□□□ 0.93
COL20A1-207ENST00000494913 RASEFQ8IZ41 740 aa20.88■□□□□ 0.93
COL20A1-207ENST00000494913 NSUN6Q8TEA1 469 aaKnown RBP20.88■□□□□ 0.93
COL20A1-207ENST00000494913 PIBF1Q8WXW3 757 aa20.88■□□□□ 0.93
COL20A1-207ENST00000494913 GLT1D1Q96MS3 346 aa20.88■□□□□ 0.93
COL20A1-207ENST00000494913 NEK1Q96PY6 1258 aa20.88■□□□□ 0.93
COL20A1-207ENST00000494913 PRDM5Q9NQX1 630 aaPredicted RBP20.88■□□□□ 0.93
COL20A1-207ENST00000494913 PNMA6FA0A0J9YX94 578 aa20.87■□□□□ 0.93
COL20A1-207ENST00000494913 LRRC37A2A6NM11 1700 aa20.87■□□□□ 0.93
COL20A1-207ENST00000494913 OPLAHO14841 1288 aa20.87■□□□□ 0.93
COL20A1-207ENST00000494913 PQBP1O60828 265 aaKnown RBP20.87■□□□□ 0.93
COL20A1-207ENST00000494913 KIF5BP33176 963 aa20.87■□□□□ 0.93
COL20A1-207ENST00000494913 FSCN1Q16658 493 aaKnown RBP20.87■□□□□ 0.93
COL20A1-207ENST00000494913 RMDN3Q96TC7 470 aa20.87■□□□□ 0.93
COL20A1-207ENST00000494913 LBHD1Q9BQE6 289 aaPredicted RBP20.87■□□□□ 0.93
COL20A1-207ENST00000494913 UBE2OQ9C0C9 1292 aaKnown RBP20.87■□□□□ 0.93
COL20A1-207ENST00000494913 Q9Y3F1 56 aa20.87■□□□□ 0.93
COL20A1-207ENST00000494913 ELP1O95163 1332 aa20.86■□□□□ 0.93
COL20A1-207ENST00000494913 A0A1W2PPC1 479 aa20.86■□□□□ 0.93
COL20A1-207ENST00000494913 RBM47A0AV96 593 aaKnown RBP20.86■□□□□ 0.93
COL20A1-207ENST00000494913 TRAF1Q13077 416 aa20.86■□□□□ 0.93
COL20A1-207ENST00000494913 SH3RF1Q7Z6J0 888 aa20.86■□□□□ 0.93
COL20A1-207ENST00000494913 SLC12A7Q9Y666 1083 aa20.86■□□□□ 0.93
COL20A1-207ENST00000494913 RXRAP19793 462 aa20.85■□□□□ 0.93
COL20A1-207ENST00000494913 HSD17B4P51659 736 aa20.85■□□□□ 0.93
COL20A1-207ENST00000494913 ADCK5Q3MIX3 580 aa20.85■□□□□ 0.93
COL20A1-207ENST00000494913 TSGA10IPQ3SY00 556 aa20.85■□□□□ 0.93
COL20A1-207ENST00000494913 ARHGEF16Q5VV41 709 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms