RNA–Protein interactions for RNA: ENST00000494852.1

COL4A2-209, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-209ENST00000494852 MICALL1Q8N3F8 863 aa18.8■□□□□ 0.6
COL4A2-209ENST00000494852 TNKSO95271 1327 aa18.79■□□□□ 0.6
COL4A2-209ENST00000494852 ICAM1P05362 532 aa18.79■□□□□ 0.6
COL4A2-209ENST00000494852 RRP1P56182 461 aaKnown RBP18.79■□□□□ 0.6
COL4A2-209ENST00000494852 PURAQ00577 322 aaKnown RBP18.79■□□□□ 0.6
COL4A2-209ENST00000494852 TFF2Q03403 129 aa18.79■□□□□ 0.6
COL4A2-209ENST00000494852 PHOSPHO2Q8TCD6 241 aa18.79■□□□□ 0.6
COL4A2-209ENST00000494852 NECAB3Q96P71 396 aaPredicted RBP18.79■□□□□ 0.6
COL4A2-209ENST00000494852 NAPBQ9H115 298 aa18.79■□□□□ 0.6
COL4A2-209ENST00000494852 TRMT13Q9NUP7 481 aaKnown RBP18.79■□□□□ 0.6
COL4A2-209ENST00000494852 ADD3Q9UEY8 706 aaKnown RBP18.79■□□□□ 0.6
COL4A2-209ENST00000494852 CCPG1Q9ULG6 757 aa18.79■□□□□ 0.6
COL4A2-209ENST00000494852 STX8Q9UNK0 236 aa18.79■□□□□ 0.6
COL4A2-209ENST00000494852 MTCH2Q9Y6C9 303 aa18.79■□□□□ 0.6
COL4A2-209ENST00000494852 RBM47A0AV96 593 aaKnown RBP18.78■□□□□ 0.6
COL4A2-209ENST00000494852 GTPBP6O43824 516 aaPredicted RBP18.78■□□□□ 0.6
COL4A2-209ENST00000494852 CA3P07451 260 aa18.78■□□□□ 0.6
COL4A2-209ENST00000494852 CYP2C9P11712 490 aa18.78■□□□□ 0.6
COL4A2-209ENST00000494852 ACTN1P12814 892 aa18.78■□□□□ 0.6
COL4A2-209ENST00000494852 RFC2P35250 354 aa18.78■□□□□ 0.6
COL4A2-209ENST00000494852 CPT1AP50416 773 aa18.78■□□□□ 0.6
COL4A2-209ENST00000494852 SNAP25P60880 206 aa18.78■□□□□ 0.6
COL4A2-209ENST00000494852 TSHZ3Q63HK5 1081 aa18.78■□□□□ 0.6
COL4A2-209ENST00000494852 NSMFQ6X4W1 530 aa18.78■□□□□ 0.6
COL4A2-209ENST00000494852 FAM122AQ96E09 287 aa18.78■□□□□ 0.6
COL4A2-209ENST00000494852 WDR11Q9BZH6 1224 aa18.78■□□□□ 0.6
COL4A2-209ENST00000494852 DCTPP1Q9H773 170 aa18.78■□□□□ 0.6
COL4A2-209ENST00000494852 IL17RBQ9NRM6 502 aa18.78■□□□□ 0.6
COL4A2-209ENST00000494852 TSPY2A6NKD2 308 aa18.77■□□□□ 0.6
COL4A2-209ENST00000494852 NOVP48745 357 aa18.77■□□□□ 0.6
COL4A2-209ENST00000494852 DEFB128Q7Z7B8 93 aa18.77■□□□□ 0.6
COL4A2-209ENST00000494852 CHMP4CQ96CF2 233 aa18.77■□□□□ 0.6
COL4A2-209ENST00000494852 PURBQ96QR8 312 aaKnown RBP18.77■□□□□ 0.6
COL4A2-209ENST00000494852 SLC9A7Q96T83 725 aa18.77■□□□□ 0.6
COL4A2-209ENST00000494852 SEC62Q99442 399 aaKnown RBP18.77■□□□□ 0.6
COL4A2-209ENST00000494852 RANBP17Q9H2T7 1088 aaKnown RBP18.77■□□□□ 0.6
COL4A2-209ENST00000494852 COG5Q9UP83 839 aa18.77■□□□□ 0.6
COL4A2-209ENST00000494852 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.77■□□□□ 0.6
COL4A2-209ENST00000494852 LCTP09848 1927 aa18.76■□□□□ 0.59
COL4A2-209ENST00000494852 TCF20Q9UGU0 1960 aaKnown RBP18.76■□□□□ 0.59
COL4A2-209ENST00000494852 PITPNM1O00562 1244 aa18.76■□□□□ 0.59
COL4A2-209ENST00000494852 ALDH5A1P51649 535 aaPredicted RBP18.76■□□□□ 0.59
COL4A2-209ENST00000494852 KCNQ1P51787 676 aa18.76■□□□□ 0.59
COL4A2-209ENST00000494852 BAATQ14032 418 aaPredicted RBP18.76■□□□□ 0.59
COL4A2-209ENST00000494852 SKIV2LQ15477 1246 aaKnown RBP18.76■□□□□ 0.59
COL4A2-209ENST00000494852 MTG1Q9BT17 334 aaPredicted RBP18.76■□□□□ 0.59
COL4A2-209ENST00000494852 GPHNQ9NQX3 736 aaPredicted RBP18.76■□□□□ 0.59
COL4A2-209ENST00000494852 RFXAPO00287 272 aa18.75■□□□□ 0.59
COL4A2-209ENST00000494852 MYL3P08590 195 aa18.75■□□□□ 0.59
COL4A2-209ENST00000494852 ZMYM1Q5SVZ6 1142 aa18.75■□□□□ 0.59
COL4A2-209ENST00000494852 NFRKBQ6P4R8 1299 aa18.75■□□□□ 0.59
COL4A2-209ENST00000494852 DCAF4Q8WV16 495 aa18.75■□□□□ 0.59
COL4A2-209ENST00000494852 ARIH1Q9Y4X5 557 aaPredicted RBP18.75■□□□□ 0.59
COL4A2-209ENST00000494852 TTC41PQ6P2S7 1318 aa18.74■□□□□ 0.59
COL4A2-209ENST00000494852 PRRC2BQ5JSZ5 2229 aaKnown RBP18.74■□□□□ 0.59
COL4A2-209ENST00000494852 NKRFO15226 690 aaKnown RBP eCLIP18.74■□□□□ 0.59
COL4A2-209ENST00000494852 NMT2O60551 498 aa18.74■□□□□ 0.59
COL4A2-209ENST00000494852 KPNA6O60684 536 aa18.74■□□□□ 0.59
COL4A2-209ENST00000494852 IQCF3P0C7M6 154 aa18.74■□□□□ 0.59
COL4A2-209ENST00000494852 PTPN11Q06124 597 aaPredicted RBP18.74■□□□□ 0.59
COL4A2-209ENST00000494852 NBPF20Q3BBV1 942 aa18.74■□□□□ 0.59
COL4A2-209ENST00000494852 BRDTQ58F21 947 aaPredicted RBP18.74■□□□□ 0.59
COL4A2-209ENST00000494852 BTNL9Q6UXG8 535 aa18.74■□□□□ 0.59
COL4A2-209ENST00000494852 OR6J1Q8NGC5 347 aa18.74■□□□□ 0.59
COL4A2-209ENST00000494852 EPOPA6NHQ4 379 aa18.73■□□□□ 0.59
COL4A2-209ENST00000494852 KIF28PB7ZC32 967 aa18.73■□□□□ 0.59
COL4A2-209ENST00000494852 TAP1Q03518 808 aa18.73■□□□□ 0.59
COL4A2-209ENST00000494852 RASGRP2Q7LDG7 609 aa18.73■□□□□ 0.59
COL4A2-209ENST00000494852 HERC6Q8IVU3 1022 aa18.73■□□□□ 0.59
COL4A2-209ENST00000494852 RETREG2Q8NC44 543 aa18.73■□□□□ 0.59
COL4A2-209ENST00000494852 CERS4Q9HA82 394 aa18.73■□□□□ 0.59
COL4A2-209ENST00000494852 RAD50Q92878 1312 aa18.73■□□□□ 0.59
COL4A2-209ENST00000494852 SCN10AQ9Y5Y9 1956 aa18.72■□□□□ 0.59
COL4A2-209ENST00000494852 A6NJR5 290 aa18.72■□□□□ 0.59
COL4A2-209ENST00000494852 NFIBO00712 420 aa18.72■□□□□ 0.59
COL4A2-209ENST00000494852 TLL1O43897 1013 aa18.72■□□□□ 0.59
COL4A2-209ENST00000494852 CTDSPL2Q05D32 466 aa18.72■□□□□ 0.59
COL4A2-209ENST00000494852 CCDC96Q2M329 555 aa18.72■□□□□ 0.59
COL4A2-209ENST00000494852 FAM47CQ5HY64 1035 aa18.72■□□□□ 0.59
COL4A2-209ENST00000494852 ARNTL2Q8WYA1 636 aa18.72■□□□□ 0.59
COL4A2-209ENST00000494852 FSD1Q9BTV5 496 aa18.72■□□□□ 0.59
COL4A2-209ENST00000494852 INCENPQ9NQS7 918 aa18.72■□□□□ 0.59
COL4A2-209ENST00000494852 ANAPC4Q9UJX5 808 aa18.72■□□□□ 0.59
COL4A2-209ENST00000494852 PNMA2Q9UL42 364 aa18.72■□□□□ 0.59
COL4A2-209ENST00000494852 SCN5AQ14524 2016 aa18.72■□□□□ 0.59
COL4A2-209ENST00000494852 PTPDC1A2A3K4 754 aa18.71■□□□□ 0.59
COL4A2-209ENST00000494852 FOXP2O15409 715 aa18.71■□□□□ 0.59
COL4A2-209ENST00000494852 ORC4O43929 436 aa18.71■□□□□ 0.59
COL4A2-209ENST00000494852 RANBP6O60518 1105 aaKnown RBP18.71■□□□□ 0.59
COL4A2-209ENST00000494852 BAIAP3O94812 1187 aa18.71■□□□□ 0.59
COL4A2-209ENST00000494852 FGRP09769 529 aa18.71■□□□□ 0.59
COL4A2-209ENST00000494852 SLC16A2P36021 539 aa18.71■□□□□ 0.59
COL4A2-209ENST00000494852 BFSP2Q13515 415 aa18.71■□□□□ 0.59
COL4A2-209ENST00000494852 PPP2R5BQ15173 497 aa18.71■□□□□ 0.59
COL4A2-209ENST00000494852 SYDE2Q5VT97 1194 aa18.71■□□□□ 0.59
COL4A2-209ENST00000494852 TTBK2Q6IQ55 1244 aa18.71■□□□□ 0.59
COL4A2-209ENST00000494852 PI4K2BQ8TCG2 481 aa18.71■□□□□ 0.59
COL4A2-209ENST00000494852 SCFD2Q8WU76 684 aa18.71■□□□□ 0.59
COL4A2-209ENST00000494852 CLEC4DQ8WXI8 215 aa18.71■□□□□ 0.59
COL4A2-209ENST00000494852 HLA-CQ95604 372 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms