RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, humanhuman

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-222ENST00000494672 MCMBPQ9BTE3 642 aa7.19□□□□□ -1.26
CCDC66-222ENST00000494672 ACBD3Q9H3P7 528 aa7.19□□□□□ -1.26
CCDC66-222ENST00000494672 BACE2Q9Y5Z0 518 aa7.19□□□□□ -1.26
CCDC66-222ENST00000494672 TRBV23OR9-2A0A075B6M9 112 aa7.18□□□□□ -1.26
CCDC66-222ENST00000494672 ZC3H12DA2A288 527 aaKnown RBP7.18□□□□□ -1.26
CCDC66-222ENST00000494672 ANKRD34BA5PLL1 514 aa7.18□□□□□ -1.26
CCDC66-222ENST00000494672 PRRG2O14669 202 aa7.18□□□□□ -1.26
CCDC66-222ENST00000494672 NAT2P11245 290 aa7.18□□□□□ -1.26
CCDC66-222ENST00000494672 PAMP19021 973 aa7.18□□□□□ -1.26
CCDC66-222ENST00000494672 PRR5P85299 388 aa7.18□□□□□ -1.26
CCDC66-222ENST00000494672 TRIM26Q12899 539 aaPredicted RBP7.18□□□□□ -1.26
CCDC66-222ENST00000494672 LZTR1Q8N653 840 aa7.18□□□□□ -1.26
CCDC66-222ENST00000494672 RELTQ969Z4 430 aa7.18□□□□□ -1.26
CCDC66-222ENST00000494672 CCSER2Q9H7U1 834 aa7.18□□□□□ -1.26
CCDC66-222ENST00000494672 NPHP3-ACAD11A0A0J9YXS1 232 aa7.17□□□□□ -1.26
CCDC66-222ENST00000494672 UNCXA6NJT0 531 aa7.17□□□□□ -1.26
CCDC66-222ENST00000494672 IGFBP6P24592 240 aaPredicted RBP7.17□□□□□ -1.26
CCDC66-222ENST00000494672 VMACQ2NL98 169 aa7.17□□□□□ -1.26
CCDC66-222ENST00000494672 POMZP3Q6PJE2 187 aa7.17□□□□□ -1.26
CCDC66-222ENST00000494672 CRACR2BQ8N4Y2 399 aaPredicted RBP7.17□□□□□ -1.26
CCDC66-222ENST00000494672 LINC01356Q8N9X3 169 aa7.17□□□□□ -1.26
CCDC66-222ENST00000494672 ANAPC16Q96DE5 110 aa7.17□□□□□ -1.26
CCDC66-222ENST00000494672 KRTAP4-9Q9BYQ8 210 aa7.17□□□□□ -1.26
CCDC66-222ENST00000494672 SUSD2Q9UGT4 822 aa7.17□□□□□ -1.26
CCDC66-222ENST00000494672 AKT3Q9Y243 479 aa7.17□□□□□ -1.26
CCDC66-222ENST00000494672 NCAM1P13591 858 aa7.16□□□□□ -1.26
CCDC66-222ENST00000494672 ZNF143P52747 638 aaPredicted RBP7.16□□□□□ -1.26
CCDC66-222ENST00000494672 CAP1Q01518 475 aa7.16□□□□□ -1.26
CCDC66-222ENST00000494672 VPS37DQ86XT2 251 aa7.16□□□□□ -1.26
CCDC66-222ENST00000494672 CPNE8Q86YQ8 564 aa7.16□□□□□ -1.26
CCDC66-222ENST00000494672 SP8Q8IXZ3 490 aa7.16□□□□□ -1.26
CCDC66-222ENST00000494672 FAM169BQ8N8A8 192 aa7.16□□□□□ -1.26
CCDC66-222ENST00000494672 USP33Q8TEY7 942 aa7.16□□□□□ -1.26
CCDC66-222ENST00000494672 FAN1Q9Y2M0 1017 aa7.16□□□□□ -1.26
CCDC66-222ENST00000494672 HCFC2Q9Y5Z7 792 aa7.16□□□□□ -1.26
CCDC66-222ENST00000494672 NCANO14594 1321 aa7.16□□□□□ -1.26
CCDC66-222ENST00000494672 NOP56O00567 594 aaKnown RBP7.15□□□□□ -1.26
CCDC66-222ENST00000494672 NPHS1O60500 1241 aa7.15□□□□□ -1.26
CCDC66-222ENST00000494672 GLI4P10075 376 aa7.15□□□□□ -1.26
CCDC66-222ENST00000494672 LIMS1P48059 325 aa7.15□□□□□ -1.26
CCDC66-222ENST00000494672 NCAPHQ15003 741 aa7.15□□□□□ -1.26
CCDC66-222ENST00000494672 RNF38Q9H0F5 515 aa7.15□□□□□ -1.26
CCDC66-222ENST00000494672 NUDT5Q9UKK9 219 aa7.15□□□□□ -1.26
CCDC66-222ENST00000494672 RWDD3Q9Y3V2 267 aa7.15□□□□□ -1.26
CCDC66-222ENST00000494672 KCNH1O95259 989 aa7.14□□□□□ -1.27
CCDC66-222ENST00000494672 ATF4P18848 351 aaPredicted RBP7.14□□□□□ -1.27
CCDC66-222ENST00000494672 FOXO4P98177 505 aa7.14□□□□□ -1.27
CCDC66-222ENST00000494672 NFIXQ14938 502 aa7.14□□□□□ -1.27
CCDC66-222ENST00000494672 SLC9A5Q14940 896 aa7.14□□□□□ -1.27
CCDC66-222ENST00000494672 ZNF513Q8N8E2 541 aaPredicted RBP7.14□□□□□ -1.27
CCDC66-222ENST00000494672 BVESQ8NE79 360 aa7.14□□□□□ -1.27
CCDC66-222ENST00000494672 ALG3Q92685 438 aa7.14□□□□□ -1.27
CCDC66-222ENST00000494672 PEX11GQ96HA9 241 aa7.14□□□□□ -1.27
CCDC66-222ENST00000494672 XYLT2Q9H1B5 865 aa7.14□□□□□ -1.27
CCDC66-222ENST00000494672 CAPN10Q9HC96 672 aa7.14□□□□□ -1.27
CCDC66-222ENST00000494672 EMC9Q9Y3B6 208 aa7.14□□□□□ -1.27
CCDC66-222ENST00000494672 A0A0G2JLL6 359 aaPredicted RBP7.13□□□□□ -1.27
CCDC66-222ENST00000494672 OTOL1A6NHN0 477 aaPredicted RBP7.13□□□□□ -1.27
CCDC66-222ENST00000494672 FOXD2O60548 495 aaPredicted RBP7.13□□□□□ -1.27
CCDC66-222ENST00000494672 PPP1R11O60927 126 aaPredicted RBP7.13□□□□□ -1.27
CCDC66-222ENST00000494672 ZBTB7AO95365 584 aa7.13□□□□□ -1.27
CCDC66-222ENST00000494672 ATF2P15336 505 aa7.13□□□□□ -1.27
CCDC66-222ENST00000494672 FBLN1P23142 703 aa7.13□□□□□ -1.27
CCDC66-222ENST00000494672 NETO2Q8NC67 525 aa7.13□□□□□ -1.27
CCDC66-222ENST00000494672 PPP1R14AQ96A00 147 aa7.13□□□□□ -1.27
CCDC66-222ENST00000494672 TSPAN17Q96FV3 270 aa7.13□□□□□ -1.27
CCDC66-222ENST00000494672 LUC7LQ9NQ29 371 aaKnown RBP7.13□□□□□ -1.27
CCDC66-222ENST00000494672 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.13□□□□□ -1.27
CCDC66-222ENST00000494672 GULP1Q9UBP9 304 aa7.13□□□□□ -1.27
CCDC66-222ENST00000494672 APEX2Q9UBZ4 518 aa7.13□□□□□ -1.27
CCDC66-222ENST00000494672 C7orf72A4D263 438 aa7.12□□□□□ -1.27
CCDC66-222ENST00000494672 ASGR2P07307 311 aa7.12□□□□□ -1.27
CCDC66-222ENST00000494672 FEZF2Q8TBJ5 459 aa7.12□□□□□ -1.27
CCDC66-222ENST00000494672 MMP19Q99542 508 aa7.12□□□□□ -1.27
CCDC66-222ENST00000494672 MTA3Q9BTC8 594 aa7.12□□□□□ -1.27
CCDC66-222ENST00000494672 RXFP1Q9HBX9 757 aa7.12□□□□□ -1.27
CCDC66-222ENST00000494672 CYP26B1Q9NR63 512 aa7.12□□□□□ -1.27
CCDC66-222ENST00000494672 RTEL1Q9NZ71 1219 aa7.12□□□□□ -1.27
CCDC66-222ENST00000494672 CLEC1BQ9P126 229 aa7.12□□□□□ -1.27
CCDC66-222ENST00000494672 PMF1-BGLAPU3KQ54 211 aa7.12□□□□□ -1.27
CCDC66-222ENST00000494672 KCNC1P48547 511 aa7.11□□□□□ -1.27
CCDC66-222ENST00000494672 SCRN1Q12765 414 aa7.11□□□□□ -1.27
CCDC66-222ENST00000494672 ERICH6BQ5W0A0 696 aa7.11□□□□□ -1.27
CCDC66-222ENST00000494672 ZDHHC14Q8IZN3 488 aa7.11□□□□□ -1.27
CCDC66-222ENST00000494672 COPS5Q92905 334 aa7.11□□□□□ -1.27
CCDC66-222ENST00000494672 PLA2G2DQ9UNK4 145 aa7.11□□□□□ -1.27
CCDC66-222ENST00000494672 FFAR3O14843 346 aa7.1□□□□□ -1.27
CCDC66-222ENST00000494672 SMAD7O15105 426 aaKnown RBP7.1□□□□□ -1.27
CCDC66-222ENST00000494672 FUCA1P04066 466 aa7.1□□□□□ -1.27
CCDC66-222ENST00000494672 SSBP05455 408 aaKnown RBP eCLIP7.1□□□□□ -1.27
CCDC66-222ENST00000494672 PLS3P13797 630 aa7.1□□□□□ -1.27
CCDC66-222ENST00000494672 SYN1P17600 705 aa7.1□□□□□ -1.27
CCDC66-222ENST00000494672 ERCC5P28715 1186 aaPredicted RBP7.1□□□□□ -1.27
CCDC66-222ENST00000494672 GNL2Q13823 731 aaKnown RBP7.1□□□□□ -1.27
CCDC66-222ENST00000494672 TNNI3KQ59H18 835 aa7.1□□□□□ -1.27
CCDC66-222ENST00000494672 WWC2Q6AWC2 1192 aa7.1□□□□□ -1.27
CCDC66-222ENST00000494672 GTF2IRD2BQ6EKJ0 949 aa7.1□□□□□ -1.27
CCDC66-222ENST00000494672 B3GNT8Q7Z7M8 397 aa7.1□□□□□ -1.27
CCDC66-222ENST00000494672 GTF2IRD2Q86UP8 949 aa7.1□□□□□ -1.27
CCDC66-222ENST00000494672 TRIM59Q8IWR1 403 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms