RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 CCDC57Q2TAC2 916 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 ADCK5Q3MIX3 580 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 GLE1Q53GS7 698 aaKnown RBP3.04□□□□□ -1.92
MDC1-208ENST00000494654 HSP90AB2PQ58FF8 381 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 TTMPQ5BVD1 217 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 CFAP70Q5T0N1 1121 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 PPP1R26Q5T8A7 1209 aaPredicted RBP3.04□□□□□ -1.92
MDC1-208ENST00000494654 HHATQ5VTY9 493 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 TSHZ3Q63HK5 1081 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 SPECC1LQ69YQ0 1117 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 CCDC70Q6NSX1 233 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 EMBQ6PCB8 327 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 BLOC1S2Q6QNY1 142 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 ZNF662Q6ZS27 426 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 NLRP14Q86W24 1093 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 CEP57Q86XR8 500 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 DZIP3Q86Y13 1208 aaKnown RBP3.04□□□□□ -1.92
MDC1-208ENST00000494654 CD302Q8IX05 232 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 ELOA2Q8IYF1 753 aaPredicted RBP3.04□□□□□ -1.92
MDC1-208ENST00000494654 FAM177A1Q8N128 213 aaPredicted RBP3.04□□□□□ -1.92
MDC1-208ENST00000494654 GALNT15Q8N3T1 639 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 MREGQ8N565 214 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 ARFGAP2Q8N6H7 521 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 TEX9Q8N6V9 391 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 KDF1Q8NAX2 398 aaPredicted RBP3.04□□□□□ -1.92
MDC1-208ENST00000494654 NOA1Q8NC60 698 aaKnown RBP3.04□□□□□ -1.92
MDC1-208ENST00000494654 ZNF784Q8NCA9 323 aaPredicted RBP3.04□□□□□ -1.92
MDC1-208ENST00000494654 FAM81AQ8TBF8 368 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 KCNG4Q8TDN1 519 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 NUP133Q8WUM0 1156 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 RIN2Q8WYP3 895 aaPredicted RBP3.04□□□□□ -1.92
MDC1-208ENST00000494654 DPF2Q92785 391 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 CUL5Q93034 780 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 SLC10A4Q96EP9 437 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 CCDC97Q96F63 343 aaPredicted RBP3.04□□□□□ -1.92
MDC1-208ENST00000494654 BICD1Q96G01 975 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 RBM17Q96I25 401 aaKnown RBP3.04□□□□□ -1.92
MDC1-208ENST00000494654 SCLT1Q96NL6 688 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 TRAPPC9Q96Q05 1148 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 USP28Q96RU2 1077 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 TSC22D3Q99576 134 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 RHOXF2Q9BQY4 288 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 LZTS2Q9BRK4 669 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 C19orf44Q9H6X5 657 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 NOD2Q9HC29 1040 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 INTS13Q9NVM9 706 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 HAUS2Q9NVX0 235 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 RTEL1Q9NZ71 1219 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 RGL1Q9NZL6 768 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 CTNNAL1Q9UBT7 734 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 HOOK1Q9UJC3 728 aaKnown RBP3.04□□□□□ -1.92
MDC1-208ENST00000494654 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.04□□□□□ -1.92
MDC1-208ENST00000494654 RIPOR2Q9Y4F9 1068 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 SAMM50Q9Y512 469 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 PCDHGC5Q9Y5F6 944 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 RBM8AQ9Y5S9 174 aaKnown RBP3.04□□□□□ -1.92
MDC1-208ENST00000494654 GMEB1Q9Y692 573 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 WASF2Q9Y6W5 498 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 NAV1Q8NEY1 1877 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.04□□□□□ -1.92
MDC1-208ENST00000494654 COL16A1Q07092 1604 aaPredicted RBP3.04□□□□□ -1.92
MDC1-208ENST00000494654 PALLDQ8WX93 1383 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 ZMYM6O95789 1325 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 WDR17Q8IZU2 1322 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 COL24A1Q17RW2 1714 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 DOT1LQ8TEK3 1739 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 GPR75-ASB3A0A0A6YYF3 556 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 GOLGA6L10A0A0M3HER8 536 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 A0A1B0GTH6 734 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 A6NHS1 94 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 GOLGA6L10A6NI86 522 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 HMGB1P1B2RPK0 211 aaPredicted RBP3.03□□□□□ -1.92
MDC1-208ENST00000494654 AKR1B15C9JRZ8 316 aaPredicted RBP3.03□□□□□ -1.92
MDC1-208ENST00000494654 APBB1O00213 710 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 PSMD14O00487 310 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 OPLAHO14841 1288 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 IFIT3O14879 490 aaKnown RBP3.03□□□□□ -1.92
MDC1-208ENST00000494654 SLC27A2O14975 620 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 AXIN1O15169 862 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 SKAP2O75563 359 aaPredicted RBP3.03□□□□□ -1.92
MDC1-208ENST00000494654 DGAT1O75907 488 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 FLOT1O75955 427 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 PENKP01210 267 aaPredicted RBP3.03□□□□□ -1.92
MDC1-208ENST00000494654 MYL1P05976 194 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 SLC3A2P08195 630 aaKnown RBP3.03□□□□□ -1.92
MDC1-208ENST00000494654 LINGO3P0C6S8 592 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 GNAT1P11488 350 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 ATP1A3P13637 1013 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 SNRPBP14678 240 aaKnown RBP3.03□□□□□ -1.92
MDC1-208ENST00000494654 CPA1P15085 419 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 ZNF18P17022 549 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 NR1D1P20393 614 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 CNGA1P29973 690 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 ALDH1B1P30837 517 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 ALDH3A1P30838 453 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 PBX1P40424 430 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 ELF3P78545 371 aaPredicted RBP3.03□□□□□ -1.92
MDC1-208ENST00000494654 AKAP17AQ02040 695 aaKnown RBP3.03□□□□□ -1.92
MDC1-208ENST00000494654 DEUP1Q05D60 604 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 MYO1EQ12965 1108 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms