RNA–Protein interactions for RNA: ENST00000494065.2

DEPDC5-220, Transcript of DEP domain containing 5, humanhuman

TSL 3

Gene DEPDC5, Length 414 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC5-220ENST00000494065 DIS3Q9Y2L1 958 aaKnown RBP9.53□□□□□ -0.88
DEPDC5-220ENST00000494065 PLXNA1Q9UIW2 1896 aa9.53□□□□□ -0.88
DEPDC5-220ENST00000494065 F5H6K3 240 aa9.52□□□□□ -0.89
DEPDC5-220ENST00000494065 COBLO75128 1261 aa9.52□□□□□ -0.89
DEPDC5-220ENST00000494065 ZBED4O75132 1171 aa9.52□□□□□ -0.89
DEPDC5-220ENST00000494065 PRDM1O75626 825 aa9.52□□□□□ -0.89
DEPDC5-220ENST00000494065 BMP8BP34820 402 aa9.52□□□□□ -0.89
DEPDC5-220ENST00000494065 ANP32AP39687 249 aaKnown RBP9.52□□□□□ -0.89
DEPDC5-220ENST00000494065 OAZ1P54368 228 aa9.52□□□□□ -0.89
DEPDC5-220ENST00000494065 KLRC3Q07444 240 aa9.52□□□□□ -0.89
DEPDC5-220ENST00000494065 ANKRD45Q5TZF3 282 aa9.52□□□□□ -0.89
DEPDC5-220ENST00000494065 SNRNP48Q6IEG0 339 aaKnown RBP9.52□□□□□ -0.89
DEPDC5-220ENST00000494065 STK11IPQ8N1F8 1099 aa9.52□□□□□ -0.89
DEPDC5-220ENST00000494065 LRRC47Q8N1G4 583 aaKnown RBP9.52□□□□□ -0.89
DEPDC5-220ENST00000494065 MSL3Q8N5Y2 521 aaKnown RBP9.52□□□□□ -0.89
DEPDC5-220ENST00000494065 PRPF38AQ8NAV1 312 aaKnown RBP9.52□□□□□ -0.89
DEPDC5-220ENST00000494065 REPS2Q8NFH8 660 aa9.52□□□□□ -0.89
DEPDC5-220ENST00000494065 NEDD1Q8NHV4 660 aa9.52□□□□□ -0.89
DEPDC5-220ENST00000494065 CEP95Q96GE4 821 aa9.52□□□□□ -0.89
DEPDC5-220ENST00000494065 NUP88Q99567 741 aaPredicted RBP9.52□□□□□ -0.89
DEPDC5-220ENST00000494065 GDF15Q99988 308 aa9.52□□□□□ -0.89
DEPDC5-220ENST00000494065 MTMR4Q9NYA4 1195 aa9.52□□□□□ -0.89
DEPDC5-220ENST00000494065 CLIP2Q9UDT6 1046 aa9.52□□□□□ -0.89
DEPDC5-220ENST00000494065 STAP2Q9UGK3 403 aa9.52□□□□□ -0.89
DEPDC5-220ENST00000494065 FBXO40Q9UH90 709 aa9.52□□□□□ -0.89
DEPDC5-220ENST00000494065 FEM1BQ9UK73 627 aa9.52□□□□□ -0.89
DEPDC5-220ENST00000494065 ZMYM6O95789 1325 aa9.52□□□□□ -0.89
DEPDC5-220ENST00000494065 ATP2A1O14983 1001 aa9.51□□□□□ -0.89
DEPDC5-220ENST00000494065 RARBP10826 455 aa9.51□□□□□ -0.89
DEPDC5-220ENST00000494065 SLC19A1P41440 591 aa9.51□□□□□ -0.89
DEPDC5-220ENST00000494065 PDE1AP54750 535 aa9.51□□□□□ -0.89
DEPDC5-220ENST00000494065 LRRC26Q2I0M4 334 aa9.51□□□□□ -0.89
DEPDC5-220ENST00000494065 FAM160B2Q86V87 743 aa9.51□□□□□ -0.89
DEPDC5-220ENST00000494065 TRPV1Q8NER1 839 aa9.51□□□□□ -0.89
DEPDC5-220ENST00000494065 MKL1Q969V6 931 aa9.51□□□□□ -0.89
DEPDC5-220ENST00000494065 SEC62Q99442 399 aaKnown RBP9.51□□□□□ -0.89
DEPDC5-220ENST00000494065 HELLSQ9NRZ9 838 aa9.51□□□□□ -0.89
DEPDC5-220ENST00000494065 PRKAG2Q9UGJ0 569 aa9.51□□□□□ -0.89
DEPDC5-220ENST00000494065 ISY1Q9ULR0 285 aaKnown RBP9.51□□□□□ -0.89
DEPDC5-220ENST00000494065 CNPY2Q9Y2B0 182 aa9.51□□□□□ -0.89
DEPDC5-220ENST00000494065 SYNGAP1Q96PV0 1343 aa9.51□□□□□ -0.89
DEPDC5-220ENST00000494065 RANBP2P49792 3224 aaKnown RBP9.5□□□□□ -0.89
DEPDC5-220ENST00000494065 LAMA4Q16363 1823 aa9.5□□□□□ -0.89
DEPDC5-220ENST00000494065 TSPY2A6NKD2 308 aa9.5□□□□□ -0.89
DEPDC5-220ENST00000494065 ZBTB24O43167 697 aaPredicted RBP9.5□□□□□ -0.89
DEPDC5-220ENST00000494065 BMP3P12645 472 aa9.5□□□□□ -0.89
DEPDC5-220ENST00000494065 AKR1A1P14550 325 aa9.5□□□□□ -0.89
DEPDC5-220ENST00000494065 SYN1P17600 705 aa9.5□□□□□ -0.89
DEPDC5-220ENST00000494065 MAGEA10P43363 369 aaPredicted RBP9.5□□□□□ -0.89
DEPDC5-220ENST00000494065 STAT2P52630 851 aa9.5□□□□□ -0.89
DEPDC5-220ENST00000494065 MFAP1P55081 439 aaKnown RBP9.5□□□□□ -0.89
DEPDC5-220ENST00000494065 TFAP4Q01664 338 aa9.5□□□□□ -0.89
DEPDC5-220ENST00000494065 IKQ13123 557 aaPredicted RBP9.5□□□□□ -0.89
DEPDC5-220ENST00000494065 ZNF792Q3KQV3 632 aa9.5□□□□□ -0.89
DEPDC5-220ENST00000494065 SLFN13Q68D06 897 aa9.5□□□□□ -0.89
DEPDC5-220ENST00000494065 LIAT1Q6ZQX7 453 aa9.5□□□□□ -0.89
DEPDC5-220ENST00000494065 CHST13Q8NET6 341 aa9.5□□□□□ -0.89
DEPDC5-220ENST00000494065 KIFC2Q96AC6 838 aa9.5□□□□□ -0.89
DEPDC5-220ENST00000494065 GMCL1Q96IK5 515 aa9.5□□□□□ -0.89
DEPDC5-220ENST00000494065 TINF2Q9BSI4 451 aa9.5□□□□□ -0.89
DEPDC5-220ENST00000494065 PRKD2Q9BZL6 878 aa9.5□□□□□ -0.89
DEPDC5-220ENST00000494065 SENP6Q9GZR1 1112 aaPredicted RBP9.5□□□□□ -0.89
DEPDC5-220ENST00000494065 SLC38A10Q9HBR0 1119 aa9.5□□□□□ -0.89
DEPDC5-220ENST00000494065 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.5□□□□□ -0.89
DEPDC5-220ENST00000494065 LTBP2Q14767 1821 aa9.49□□□□□ -0.89
DEPDC5-220ENST00000494065 ORC4O43929 436 aa9.49□□□□□ -0.89
DEPDC5-220ENST00000494065 PGK2P07205 417 aa9.49□□□□□ -0.89
DEPDC5-220ENST00000494065 PCP11498 1178 aaKnown RBP9.49□□□□□ -0.89
DEPDC5-220ENST00000494065 SLC1A4P43007 532 aa9.49□□□□□ -0.89
DEPDC5-220ENST00000494065 RTP1P59025 263 aa9.49□□□□□ -0.89
DEPDC5-220ENST00000494065 ALX1Q15699 326 aa9.49□□□□□ -0.89
DEPDC5-220ENST00000494065 FAM47AQ5JRC9 791 aa9.49□□□□□ -0.89
DEPDC5-220ENST00000494065 PTCRAQ6ISU1 281 aaPredicted RBP9.49□□□□□ -0.89
DEPDC5-220ENST00000494065 CCDC129Q6ZRS4 1044 aa9.49□□□□□ -0.89
DEPDC5-220ENST00000494065 RNF180Q86T96 592 aa9.49□□□□□ -0.89
DEPDC5-220ENST00000494065 TDHQ8IZJ6 230 aa9.49□□□□□ -0.89
DEPDC5-220ENST00000494065 CHURC1Q8WUH1 139 aa9.49□□□□□ -0.89
DEPDC5-220ENST00000494065 LRRN4Q8WUT4 740 aa9.49□□□□□ -0.89
DEPDC5-220ENST00000494065 DDX11Q96FC9 970 aa9.49□□□□□ -0.89
DEPDC5-220ENST00000494065 LBHD1Q9BQE6 289 aaPredicted RBP9.49□□□□□ -0.89
DEPDC5-220ENST00000494065 UBE2OQ9C0C9 1292 aaKnown RBP9.49□□□□□ -0.89
DEPDC5-220ENST00000494065 RWDD1Q9H446 243 aaPredicted RBP9.49□□□□□ -0.89
DEPDC5-220ENST00000494065 XPNPEP3Q9NQH7 507 aa9.49□□□□□ -0.89
DEPDC5-220ENST00000494065 MAP10Q9P2G4 905 aa9.49□□□□□ -0.89
DEPDC5-220ENST00000494065 ANAPC4Q9UJX5 808 aa9.49□□□□□ -0.89
DEPDC5-220ENST00000494065 STX8Q9UNK0 236 aa9.49□□□□□ -0.89
DEPDC5-220ENST00000494065 CCDC171Q6TFL3 1326 aa9.49□□□□□ -0.89
DEPDC5-220ENST00000494065 ZNFX1Q9P2E3 1918 aaKnown RBP9.48□□□□□ -0.89
DEPDC5-220ENST00000494065 LRRC37A2A6NM11 1700 aa9.48□□□□□ -0.89
DEPDC5-220ENST00000494065 DNAJC25-GNG10A0A024R161 153 aa9.48□□□□□ -0.89
DEPDC5-220ENST00000494065 A0A0D9SFI3 127 aa9.48□□□□□ -0.89
DEPDC5-220ENST00000494065 FOXP2O15409 715 aa9.48□□□□□ -0.89
DEPDC5-220ENST00000494065 RANBP6O60518 1105 aaKnown RBP9.48□□□□□ -0.89
DEPDC5-220ENST00000494065 PLA2G6O60733 806 aa9.48□□□□□ -0.89
DEPDC5-220ENST00000494065 CD2BP2O95400 341 aaKnown RBP9.48□□□□□ -0.89
DEPDC5-220ENST00000494065 NT5C2P49902 561 aa9.48□□□□□ -0.89
DEPDC5-220ENST00000494065 SNX17Q15036 470 aa9.48□□□□□ -0.89
DEPDC5-220ENST00000494065 LRRC41Q15345 812 aa9.48□□□□□ -0.89
DEPDC5-220ENST00000494065 TKFCQ3LXA3 575 aa9.48□□□□□ -0.89
DEPDC5-220ENST00000494065 MCMDC2Q4G0Z9 681 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms