RNA–Protein interactions for RNA: ENST00000494019.5

RFC2-211, Transcript of replication factor C subunit 2, humanhuman

TSL 3

Gene RFC2, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-211ENST00000494019 FGD4Q96M96 766 aa11.68□□□□□ -0.54
RFC2-211ENST00000494019 PURBQ96QR8 312 aaKnown RBP11.68□□□□□ -0.54
RFC2-211ENST00000494019 DOCK5Q9H7D0 1870 aa11.68□□□□□ -0.54
RFC2-211ENST00000494019 OPLAHO14841 1288 aa11.67□□□□□ -0.54
RFC2-211ENST00000494019 ST18O60284 1047 aa11.67□□□□□ -0.54
RFC2-211ENST00000494019 CCL5P13501 91 aa11.67□□□□□ -0.54
RFC2-211ENST00000494019 AKAP17AQ02040 695 aaKnown RBP11.67□□□□□ -0.54
RFC2-211ENST00000494019 CACNB2Q08289 660 aaPredicted RBP11.67□□□□□ -0.54
RFC2-211ENST00000494019 NTRK3Q16288 839 aa11.67□□□□□ -0.54
RFC2-211ENST00000494019 ME3Q16798 604 aa11.67□□□□□ -0.54
RFC2-211ENST00000494019 WWC2Q6AWC2 1192 aa11.67□□□□□ -0.54
RFC2-211ENST00000494019 CPLX2Q6PUV4 134 aaKnown RBP11.67□□□□□ -0.54
RFC2-211ENST00000494019 ZNF467Q7Z7K2 595 aaPredicted RBP11.67□□□□□ -0.54
RFC2-211ENST00000494019 TBC1D5Q92609 795 aa11.67□□□□□ -0.54
RFC2-211ENST00000494019 TINF2Q9BSI4 451 aa11.67□□□□□ -0.54
RFC2-211ENST00000494019 SLC26A6Q9BXS9 759 aa11.67□□□□□ -0.54
RFC2-211ENST00000494019 RNF26Q9BY78 433 aaPredicted RBP11.67□□□□□ -0.54
RFC2-211ENST00000494019 RNF208Q9H0X6 261 aa11.67□□□□□ -0.54
RFC2-211ENST00000494019 UNC93B1Q9H1C4 597 aa11.67□□□□□ -0.54
RFC2-211ENST00000494019 RBM27Q9P2N5 1060 aaKnown RBP11.67□□□□□ -0.54
RFC2-211ENST00000494019 V9GY48 417 aaPredicted RBP11.67□□□□□ -0.54
RFC2-211ENST00000494019 ASTN1O14525 1302 aa11.66□□□□□ -0.54
RFC2-211ENST00000494019 RPTORQ8N122 1335 aa11.66□□□□□ -0.54
RFC2-211ENST00000494019 SYNGAP1Q96PV0 1343 aa11.66□□□□□ -0.54
RFC2-211ENST00000494019 SOWAHBA6NEL2 793 aa11.66□□□□□ -0.54
RFC2-211ENST00000494019 hCG_1984214I3L0E3 225 aa11.66□□□□□ -0.54
RFC2-211ENST00000494019 PFKFB2O60825 505 aa11.66□□□□□ -0.54
RFC2-211ENST00000494019 CYBAP13498 195 aa11.66□□□□□ -0.54
RFC2-211ENST00000494019 SCG2P13521 617 aa11.66□□□□□ -0.54
RFC2-211ENST00000494019 IFNAR1P17181 557 aa11.66□□□□□ -0.54
RFC2-211ENST00000494019 HOXA13P31271 388 aaPredicted RBP11.66□□□□□ -0.54
RFC2-211ENST00000494019 ALDH5A1P51649 535 aaPredicted RBP11.66□□□□□ -0.54
RFC2-211ENST00000494019 HSD17B4P51659 736 aa11.66□□□□□ -0.54
RFC2-211ENST00000494019 NAPAP54920 295 aa11.66□□□□□ -0.54
RFC2-211ENST00000494019 MAP3K21Q5TCX8 1036 aa11.66□□□□□ -0.54
RFC2-211ENST00000494019 ARMCX2Q7L311 632 aa11.66□□□□□ -0.54
RFC2-211ENST00000494019 TRIM22Q8IYM9 498 aa11.66□□□□□ -0.54
RFC2-211ENST00000494019 MSL3Q8N5Y2 521 aaKnown RBP11.66□□□□□ -0.54
RFC2-211ENST00000494019 ZNF713Q8N859 430 aaPredicted RBP11.66□□□□□ -0.54
RFC2-211ENST00000494019 RGS22Q8NE09 1264 aa11.66□□□□□ -0.54
RFC2-211ENST00000494019 GTF3C6Q969F1 213 aa11.66□□□□□ -0.54
RFC2-211ENST00000494019 TMEM106CQ9BVX2 250 aa11.66□□□□□ -0.54
RFC2-211ENST00000494019 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.66□□□□□ -0.54
RFC2-211ENST00000494019 HMX1Q9NP08 348 aaPredicted RBP11.66□□□□□ -0.54
RFC2-211ENST00000494019 COL20A1Q9P218 1284 aa11.66□□□□□ -0.54
RFC2-211ENST00000494019 ADD3Q9UEY8 706 aaKnown RBP11.66□□□□□ -0.54
RFC2-211ENST00000494019 CNPY2Q9Y2B0 182 aa11.66□□□□□ -0.54
RFC2-211ENST00000494019 ASB14A6NK59 587 aa11.65□□□□□ -0.54
RFC2-211ENST00000494019 GCOM1H8Y6P7 765 aaPredicted RBP11.65□□□□□ -0.54
RFC2-211ENST00000494019 PRPF3O43395 683 aaKnown RBP11.65□□□□□ -0.54
RFC2-211ENST00000494019 CDKL5O76039 1030 aa11.65□□□□□ -0.54
RFC2-211ENST00000494019 IGHA2P01877 340 aa11.65□□□□□ -0.54
RFC2-211ENST00000494019 POLR2MP0CAP2 368 aa11.65□□□□□ -0.54
RFC2-211ENST00000494019 CNGA1P29973 690 aa11.65□□□□□ -0.54
RFC2-211ENST00000494019 CCND3P30281 292 aaPredicted RBP11.65□□□□□ -0.54
RFC2-211ENST00000494019 SOX10P56693 466 aa11.65□□□□□ -0.54
RFC2-211ENST00000494019 GHRHRQ02643 423 aa11.65□□□□□ -0.54
RFC2-211ENST00000494019 SSRP1Q08945 709 aaKnown RBP11.65□□□□□ -0.54
RFC2-211ENST00000494019 PFKFB3Q16875 520 aaPredicted RBP11.65□□□□□ -0.54
RFC2-211ENST00000494019 PPP1R18Q6NYC8 613 aa11.65□□□□□ -0.54
RFC2-211ENST00000494019 MAMDC4Q6UXC1 1216 aa11.65□□□□□ -0.54
RFC2-211ENST00000494019 NECAB1Q8N987 351 aa11.65□□□□□ -0.54
RFC2-211ENST00000494019 DNERQ8NFT8 737 aa11.65□□□□□ -0.54
RFC2-211ENST00000494019 SMARCC2Q8TAQ2 1214 aa11.65□□□□□ -0.54
RFC2-211ENST00000494019 SYTL5Q8TDW5 730 aaPredicted RBP11.65□□□□□ -0.54
RFC2-211ENST00000494019 CUL5Q93034 780 aa11.65□□□□□ -0.54
RFC2-211ENST00000494019 MPHOSPH6Q99547 160 aaKnown RBP11.65□□□□□ -0.54
RFC2-211ENST00000494019 MAF1Q9H063 256 aa11.65□□□□□ -0.54
RFC2-211ENST00000494019 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.65□□□□□ -0.54
RFC2-211ENST00000494019 ZHX1Q9UKY1 873 aaPredicted RBP11.65□□□□□ -0.54
RFC2-211ENST00000494019 LIMCH1Q9UPQ0 1083 aa11.65□□□□□ -0.54
RFC2-211ENST00000494019 DDX49Q9Y6V7 483 aaKnown RBP11.65□□□□□ -0.54
RFC2-211ENST00000494019 BRCA2P51587 3418 aa11.65□□□□□ -0.54
RFC2-211ENST00000494019 STXBP3O00186 592 aa11.64□□□□□ -0.55
RFC2-211ENST00000494019 CAPN15O75808 1086 aa11.64□□□□□ -0.55
RFC2-211ENST00000494019 SNAI1O95863 264 aaPredicted RBP11.64□□□□□ -0.55
RFC2-211ENST00000494019 PKN1Q16512 942 aa11.64□□□□□ -0.55
RFC2-211ENST00000494019 PRAMEF19Q5SWL8 479 aa11.64□□□□□ -0.55
RFC2-211ENST00000494019 TYW1BQ6NUM6 668 aa11.64□□□□□ -0.55
RFC2-211ENST00000494019 FCHSD1Q86WN1 690 aa11.64□□□□□ -0.55
RFC2-211ENST00000494019 SAMD3Q8N6K7 520 aa11.64□□□□□ -0.55
RFC2-211ENST00000494019 TRPV1Q8NER1 839 aa11.64□□□□□ -0.55
RFC2-211ENST00000494019 TAAR1Q96RJ0 339 aa11.64□□□□□ -0.55
RFC2-211ENST00000494019 PAK6Q9NQU5 681 aaPredicted RBP11.64□□□□□ -0.55
RFC2-211ENST00000494019 BARHL2Q9NY43 387 aa11.64□□□□□ -0.55
RFC2-211ENST00000494019 MAP3K20Q9NYL2 800 aaKnown RBP11.64□□□□□ -0.55
RFC2-211ENST00000494019 KIAA0100Q14667 2235 aaKnown RBP11.64□□□□□ -0.55
RFC2-211ENST00000494019 STK36Q9NRP7 1315 aa11.63□□□□□ -0.55
RFC2-211ENST00000494019 LOC102724159A0A0B4J2E5 919 aa11.63□□□□□ -0.55
RFC2-211ENST00000494019 POTEFA5A3E0 1075 aa11.63□□□□□ -0.55
RFC2-211ENST00000494019 DTNBO60941 627 aa11.63□□□□□ -0.55
RFC2-211ENST00000494019 DEXIO95424 95 aa11.63□□□□□ -0.55
RFC2-211ENST00000494019 EIF2AK2P19525 551 aaKnown RBP11.63□□□□□ -0.55
RFC2-211ENST00000494019 ADCY7P51828 1080 aa11.63□□□□□ -0.55
RFC2-211ENST00000494019 PDE4DQ08499 809 aa11.63□□□□□ -0.55
RFC2-211ENST00000494019 ST3GAL1Q11201 340 aa11.63□□□□□ -0.55
RFC2-211ENST00000494019 PWP2Q15269 919 aaKnown RBP11.63□□□□□ -0.55
RFC2-211ENST00000494019 UBE2SQ16763 222 aa11.63□□□□□ -0.55
RFC2-211ENST00000494019 ARHGEF16Q5VV41 709 aa11.63□□□□□ -0.55
RFC2-211ENST00000494019 USP17L6PQ6QN14 398 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 300.4 ms