RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 LOC102724159A0A0B4J2E5 919 aa17.09■□□□□ 0.33
ACTB-213ENST00000493945 CCDC194A0A1B0GVG4 234 aa17.09■□□□□ 0.33
ACTB-213ENST00000493945 VPS37CA5D8V6 355 aaPredicted RBP17.09■□□□□ 0.33
ACTB-213ENST00000493945 SLC15A5A6NIM6 579 aa17.09■□□□□ 0.33
ACTB-213ENST00000493945 MMP1P03956 469 aa17.09■□□□□ 0.33
ACTB-213ENST00000493945 PWP2Q15269 919 aaKnown RBP17.09■□□□□ 0.33
ACTB-213ENST00000493945 KRT40Q6A162 431 aa17.09■□□□□ 0.33
ACTB-213ENST00000493945 BLIDQ8IZY5 108 aa17.09■□□□□ 0.33
ACTB-213ENST00000493945 JMYQ8N9B5 988 aa17.09■□□□□ 0.33
ACTB-213ENST00000493945 NUDT12Q9BQG2 462 aa17.09■□□□□ 0.33
ACTB-213ENST00000493945 PHF20Q9BVI0 1012 aa17.09■□□□□ 0.33
ACTB-213ENST00000493945 CASP8AP2Q9UKL3 1982 aa17.08■□□□□ 0.33
ACTB-213ENST00000493945 POTEB2H3BUK9 544 aa17.08■□□□□ 0.32
ACTB-213ENST00000493945 RGS2P41220 211 aa17.08■□□□□ 0.32
ACTB-213ENST00000493945 PRMT2P55345 433 aa17.08■□□□□ 0.32
ACTB-213ENST00000493945 GHRHRQ02643 423 aa17.08■□□□□ 0.32
ACTB-213ENST00000493945 Q3C1V9 767 aa17.08■□□□□ 0.32
ACTB-213ENST00000493945 KRT25Q7Z3Z0 450 aa17.08■□□□□ 0.32
ACTB-213ENST00000493945 SPRYD3Q8NCJ5 442 aa17.08■□□□□ 0.32
ACTB-213ENST00000493945 EFCC1Q9HA90 598 aa17.08■□□□□ 0.32
ACTB-213ENST00000493945 RIPK3Q9Y572 518 aa17.08■□□□□ 0.32
ACTB-213ENST00000493945 NFIBO00712 420 aa17.07■□□□□ 0.32
ACTB-213ENST00000493945 STX6O43752 255 aa17.07■□□□□ 0.32
ACTB-213ENST00000493945 PTPREP23469 700 aa17.07■□□□□ 0.32
ACTB-213ENST00000493945 PSMC4P43686 418 aa17.07■□□□□ 0.32
ACTB-213ENST00000493945 HSD17B4P51659 736 aa17.07■□□□□ 0.32
ACTB-213ENST00000493945 FOSBP53539 338 aa17.07■□□□□ 0.32
ACTB-213ENST00000493945 NUCB2P80303 420 aa17.07■□□□□ 0.32
ACTB-213ENST00000493945 MCTP1Q6DN14 999 aa17.07■□□□□ 0.32
ACTB-213ENST00000493945 DPP9Q86TI2 863 aa17.07■□□□□ 0.32
ACTB-213ENST00000493945 TRMT44Q8IYL2 757 aaKnown RBP17.07■□□□□ 0.32
ACTB-213ENST00000493945 DNERQ8NFT8 737 aa17.07■□□□□ 0.32
ACTB-213ENST00000493945 CLEC4DQ8WXI8 215 aa17.07■□□□□ 0.32
ACTB-213ENST00000493945 NAP1L4Q99733 375 aaKnown RBP17.07■□□□□ 0.32
ACTB-213ENST00000493945 PORCNQ9H237 461 aa17.07■□□□□ 0.32
ACTB-213ENST00000493945 FOXP1Q9H334 677 aaPredicted RBP17.07■□□□□ 0.32
ACTB-213ENST00000493945 A1CFQ9NQ94 594 aaKnown RBP17.07■□□□□ 0.32
ACTB-213ENST00000493945 CYP39A1Q9NYL5 469 aa17.07■□□□□ 0.32
ACTB-213ENST00000493945 NOL7Q9UMY1 257 aaKnown RBP17.07■□□□□ 0.32
ACTB-213ENST00000493945 ATP6V1DQ9Y5K8 247 aa17.07■□□□□ 0.32
ACTB-213ENST00000493945 ZNFX1Q9P2E3 1918 aaKnown RBP17.06■□□□□ 0.32
ACTB-213ENST00000493945 RPS6P62753 249 aaKnown RBP17.06■□□□□ 0.32
ACTB-213ENST00000493945 GRB14Q14449 540 aa17.06■□□□□ 0.32
ACTB-213ENST00000493945 MUM1L1Q5H9M0 696 aa17.06■□□□□ 0.32
ACTB-213ENST00000493945 DIS3L2Q8IYB7 885 aaKnown RBP17.06■□□□□ 0.32
ACTB-213ENST00000493945 NSUN6Q8TEA1 469 aaKnown RBP17.06■□□□□ 0.32
ACTB-213ENST00000493945 AIFM3Q96NN9 605 aa17.06■□□□□ 0.32
ACTB-213ENST00000493945 CIZ1Q9ULV3 898 aaPredicted RBP17.06■□□□□ 0.32
ACTB-213ENST00000493945 DIS3Q9Y2L1 958 aaKnown RBP17.06■□□□□ 0.32
ACTB-213ENST00000493945 SMCHD1A6NHR9 2005 aa17.06■□□□□ 0.32
ACTB-213ENST00000493945 PLXNA1Q9UIW2 1896 aa17.05■□□□□ 0.32
ACTB-213ENST00000493945 SYT1P21579 422 aa17.05■□□□□ 0.32
ACTB-213ENST00000493945 ADORA2AP29274 412 aa17.05■□□□□ 0.32
ACTB-213ENST00000493945 CTCFP49711 727 aaPredicted RBP17.05■□□□□ 0.32
ACTB-213ENST00000493945 BAATQ14032 418 aaPredicted RBP17.05■□□□□ 0.32
ACTB-213ENST00000493945 NONOQ15233 471 aaKnown RBP eCLIP17.05■□□□□ 0.322e-10■■■■□ 19.3
ACTB-213ENST00000493945 ARHGEF16Q5VV41 709 aa17.05■□□□□ 0.32
ACTB-213ENST00000493945 BRAPQ7Z569 592 aa17.05■□□□□ 0.32
ACTB-213ENST00000493945 APBA2Q99767 749 aa17.05■□□□□ 0.32
ACTB-213ENST00000493945 ZSCAN16Q9H4T2 348 aaPredicted RBP17.05■□□□□ 0.32
ACTB-213ENST00000493945 KCNJ14Q9UNX9 436 aa17.05■□□□□ 0.32
ACTB-213ENST00000493945 ASB14A6NK59 587 aa17.04■□□□□ 0.32
ACTB-213ENST00000493945 GUCY1B3Q02153 619 aa17.04■□□□□ 0.32
ACTB-213ENST00000493945 MAP2K5Q13163 448 aa17.04■□□□□ 0.32
ACTB-213ENST00000493945 TYW1BQ6NUM6 668 aa17.04■□□□□ 0.32
ACTB-213ENST00000493945 XRRA1Q6P2D8 792 aa17.04■□□□□ 0.32
ACTB-213ENST00000493945 POTEEQ6S8J3 1075 aa17.04■□□□□ 0.32
ACTB-213ENST00000493945 FCHSD1Q86WN1 690 aa17.04■□□□□ 0.32
ACTB-213ENST00000493945 MSL3Q8N5Y2 521 aaKnown RBP17.04■□□□□ 0.32
ACTB-213ENST00000493945 ZNF296Q8WUU4 475 aaPredicted RBP17.04■□□□□ 0.32
ACTB-213ENST00000493945 IWS1Q96ST2 819 aa17.04■□□□□ 0.32
ACTB-213ENST00000493945 ANO3Q9BYT9 981 aa17.04■□□□□ 0.32
ACTB-213ENST00000493945 STAM2O75886 525 aa17.03■□□□□ 0.32
ACTB-213ENST00000493945 HOXA13P31271 388 aaPredicted RBP17.03■□□□□ 0.32
ACTB-213ENST00000493945 USP17L6PQ6QN14 398 aa17.03■□□□□ 0.32
ACTB-213ENST00000493945 SLC30A10Q6XR72 485 aa17.03■□□□□ 0.32
ACTB-213ENST00000493945 ZNF467Q7Z7K2 595 aaPredicted RBP17.03■□□□□ 0.32
ACTB-213ENST00000493945 SYTL5Q8TDW5 730 aaPredicted RBP17.03■□□□□ 0.32
ACTB-213ENST00000493945 RMDN3Q96TC7 470 aa17.03■□□□□ 0.32
ACTB-213ENST00000493945 BIN2Q9UBW5 565 aaPredicted RBP17.03■□□□□ 0.32
ACTB-213ENST00000493945 MEIS2O14770 477 aa17.02■□□□□ 0.32
ACTB-213ENST00000493945 PEX10O60683 326 aa17.02■□□□□ 0.32
ACTB-213ENST00000493945 HSPA1AP0DMV8 641 aaKnown RBP17.02■□□□□ 0.32
ACTB-213ENST00000493945 HSPA1BP0DMV9 641 aaKnown RBP17.02■□□□□ 0.32
ACTB-213ENST00000493945 TRAPPC10P48553 1259 aa17.02■□□□□ 0.32
ACTB-213ENST00000493945 UBE2SQ16763 222 aa17.02■□□□□ 0.32
ACTB-213ENST00000493945 JAKMIP3Q5VZ66 844 aa17.02■□□□□ 0.32
ACTB-213ENST00000493945 NOSTRINQ8IVI9 506 aa17.02■□□□□ 0.32
ACTB-213ENST00000493945 CD99L2Q8TCZ2 262 aa17.02■□□□□ 0.32
ACTB-213ENST00000493945 PCDHA6Q9UN73 950 aa17.02■□□□□ 0.32
ACTB-213ENST00000493945 PCDHA8Q9Y5H6 950 aa17.02■□□□□ 0.32
ACTB-213ENST00000493945 OPLAHO14841 1288 aa17.01■□□□□ 0.31
ACTB-213ENST00000493945 HOXC6P09630 235 aa17.01■□□□□ 0.31
ACTB-213ENST00000493945 XRCC5P13010 732 aaKnown RBP17.01■□□□□ 0.31
ACTB-213ENST00000493945 GCFC2P16383 781 aaKnown RBP17.01■□□□□ 0.31
ACTB-213ENST00000493945 TAL1P17542 331 aaPredicted RBP17.01■□□□□ 0.31
ACTB-213ENST00000493945 CCND2P30279 289 aa17.01■□□□□ 0.31
ACTB-213ENST00000493945 CLK2P49760 499 aaKnown RBP17.01■□□□□ 0.31
ACTB-213ENST00000493945 PDE4DQ08499 809 aa17.01■□□□□ 0.31
ACTB-213ENST00000493945 GNPTABQ3T906 1256 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms