RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 SUN2Q9UH99 717 aa8.53□□□□□ -1.04
BRCA1-221ENST00000493795 EPRSP07814 1512 aaKnown RBP8.53□□□□□ -1.04
BRCA1-221ENST00000493795 RASGRF2O14827 1237 aa8.53□□□□□ -1.04
BRCA1-221ENST00000493795 APOA1P02647 267 aa8.53□□□□□ -1.04
BRCA1-221ENST00000493795 EPHB4P54760 987 aa8.53□□□□□ -1.04
BRCA1-221ENST00000493795 POLR2FP61218 127 aaKnown RBP8.53□□□□□ -1.04
BRCA1-221ENST00000493795 PTK2BQ14289 1009 aa8.53□□□□□ -1.04
BRCA1-221ENST00000493795 SESTD1Q86VW0 696 aa8.53□□□□□ -1.04
BRCA1-221ENST00000493795 KIAA2013Q8IYS2 634 aa8.53□□□□□ -1.04
BRCA1-221ENST00000493795 DIABLOQ9NR28 239 aa8.53□□□□□ -1.04
BRCA1-221ENST00000493795 DDX28Q9NUL7 540 aaKnown RBP8.53□□□□□ -1.04
BRCA1-221ENST00000493795 MCF2LO15068 1137 aa8.53□□□□□ -1.04
BRCA1-221ENST00000493795 UFL1O94874 794 aa8.53□□□□□ -1.04
BRCA1-221ENST00000493795 HIBADHP31937 336 aaKnown RBP8.53□□□□□ -1.04
BRCA1-221ENST00000493795 KIF19Q2TAC6 998 aa8.53□□□□□ -1.04
BRCA1-221ENST00000493795 FAM47CQ5HY64 1035 aa8.53□□□□□ -1.04
BRCA1-221ENST00000493795 CPXCR1Q8N123 301 aa8.53□□□□□ -1.04
BRCA1-221ENST00000493795 DNAAF3Q8N9W5 541 aa8.53□□□□□ -1.04
BRCA1-221ENST00000493795 DEPDC1BQ8WUY9 529 aa8.53□□□□□ -1.04
BRCA1-221ENST00000493795 SNX19Q92543 992 aa8.53□□□□□ -1.04
BRCA1-221ENST00000493795 ZNF408Q9H9D4 720 aa8.53□□□□□ -1.04
BRCA1-221ENST00000493795 KIF17Q9P2E2 1029 aa8.53□□□□□ -1.04
BRCA1-221ENST00000493795 CPSF3Q9UKF6 684 aaKnown RBP8.53□□□□□ -1.04
BRCA1-221ENST00000493795 CFTRP13569 1480 aa8.53□□□□□ -1.04
BRCA1-221ENST00000493795 ATP8B1O43520 1251 aa8.53□□□□□ -1.04
BRCA1-221ENST00000493795 SLC4A1P02730 911 aa8.53□□□□□ -1.04
BRCA1-221ENST00000493795 TAC1P20366 129 aa8.53□□□□□ -1.04
BRCA1-221ENST00000493795 MFAP3P55082 362 aa8.53□□□□□ -1.04
BRCA1-221ENST00000493795 PTPROQ16827 1216 aa8.53□□□□□ -1.04
BRCA1-221ENST00000493795 PPP1R2P3Q6NXS1 205 aa8.53□□□□□ -1.04
BRCA1-221ENST00000493795 REXO1Q8N1G1 1221 aaKnown RBP8.53□□□□□ -1.04
BRCA1-221ENST00000493795 MRPL40Q9NQ50 206 aaKnown RBP8.53□□□□□ -1.04
BRCA1-221ENST00000493795 ABCF3Q9NUQ8 709 aa8.53□□□□□ -1.04
BRCA1-221ENST00000493795 PANK4Q9NVE7 773 aa8.53□□□□□ -1.04
BRCA1-221ENST00000493795 SERTAD1Q9UHV2 236 aa8.53□□□□□ -1.04
BRCA1-221ENST00000493795 JRKLQ9Y4A0 524 aa8.53□□□□□ -1.04
BRCA1-221ENST00000493795 SLC4A7Q9Y6M7 1214 aa8.53□□□□□ -1.04
BRCA1-221ENST00000493795 TADA3O75528 432 aa8.52□□□□□ -1.05
BRCA1-221ENST00000493795 DAB1O75553 588 aa8.52□□□□□ -1.05
BRCA1-221ENST00000493795 FOXD4Q12950 439 aaPredicted RBP8.52□□□□□ -1.05
BRCA1-221ENST00000493795 KRT40Q6A162 431 aa8.52□□□□□ -1.05
BRCA1-221ENST00000493795 SLFN12Q8IYM2 578 aa8.52□□□□□ -1.05
BRCA1-221ENST00000493795 DHX38Q92620 1227 aaKnown RBP8.52□□□□□ -1.05
BRCA1-221ENST00000493795 JPH2Q9BR39 696 aaPredicted RBP8.52□□□□□ -1.05
BRCA1-221ENST00000493795 INTUQ9ULD6 942 aa8.52□□□□□ -1.05
BRCA1-221ENST00000493795 L3MBTL1Q9Y468 752 aa8.52□□□□□ -1.05
BRCA1-221ENST00000493795 ZNF233A6NK53 670 aa8.52□□□□□ -1.05
BRCA1-221ENST00000493795 XPOTO43592 962 aaKnown RBP8.52□□□□□ -1.05
BRCA1-221ENST00000493795 KDM1AO60341 852 aa8.52□□□□□ -1.05
BRCA1-221ENST00000493795 ECEL1O95672 775 aa8.52□□□□□ -1.05
BRCA1-221ENST00000493795 MRPS15P82914 257 aaKnown RBP8.52□□□□□ -1.05
BRCA1-221ENST00000493795 PTK2Q05397 1052 aa8.52□□□□□ -1.05
BRCA1-221ENST00000493795 TCIRG1Q13488 830 aa8.52□□□□□ -1.05
BRCA1-221ENST00000493795 CCDC85BQ15834 202 aaPredicted RBP8.52□□□□□ -1.05
BRCA1-221ENST00000493795 ARHGEF16Q5VV41 709 aa8.52□□□□□ -1.05
BRCA1-221ENST00000493795 ATP8A2Q9NTI2 1148 aa8.52□□□□□ -1.05
BRCA1-221ENST00000493795 TFCP2L1Q9NZI6 479 aa8.52□□□□□ -1.05
BRCA1-221ENST00000493795 NCAPD3P42695 1498 aa8.52□□□□□ -1.05
BRCA1-221ENST00000493795 ESRRBO95718 433 aa8.52□□□□□ -1.05
BRCA1-221ENST00000493795 SLFN14P0C7P3 912 aa8.52□□□□□ -1.05
BRCA1-221ENST00000493795 ZNF445P59923 1031 aa8.52□□□□□ -1.05
BRCA1-221ENST00000493795 DMP1Q13316 513 aaPredicted RBP8.52□□□□□ -1.05
BRCA1-221ENST00000493795 CEP85Q6P2H3 762 aa8.52□□□□□ -1.05
BRCA1-221ENST00000493795 PCGF5Q86SE9 256 aa8.52□□□□□ -1.05
BRCA1-221ENST00000493795 PPM1KQ8N3J5 372 aa8.52□□□□□ -1.05
BRCA1-221ENST00000493795 MAGOHBQ96A72 148 aaKnown RBP8.52□□□□□ -1.05
BRCA1-221ENST00000493795 RMDN2Q96LZ7 410 aa8.52□□□□□ -1.05
BRCA1-221ENST00000493795 SLC8A2Q9UPR5 921 aa8.52□□□□□ -1.05
BRCA1-221ENST00000493795 RALGAPBQ86X10 1494 aa8.52□□□□□ -1.05
BRCA1-221ENST00000493795 SOS1Q07889 1333 aaPredicted RBP8.52□□□□□ -1.05
BRCA1-221ENST00000493795 MYL7Q01449 175 aa8.52□□□□□ -1.05
BRCA1-221ENST00000493795 CAPRIN1Q14444 709 aaKnown RBP8.52□□□□□ -1.05
BRCA1-221ENST00000493795 DESI2Q9BSY9 194 aa8.52□□□□□ -1.05
BRCA1-221ENST00000493795 DCTPP1Q9H773 170 aa8.52□□□□□ -1.05
BRCA1-221ENST00000493795 SLC38A10Q9HBR0 1119 aa8.52□□□□□ -1.05
BRCA1-221ENST00000493795 DISC1Q9NRI5 854 aa8.52□□□□□ -1.05
BRCA1-221ENST00000493795 NOP53Q9NZM5 478 aaKnown RBP8.52□□□□□ -1.05
BRCA1-221ENST00000493795 MYO1FO00160 1098 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 MAPK13O15264 365 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 TMCC1O94876 653 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 TRPC1P48995 793 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 MAP3K10Q02779 954 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 ARMCX5Q6P1M9 558 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 METTL23Q86XA0 190 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 CCNYQ8ND76 341 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 GDAP1Q8TB36 358 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 TRPV6Q9H1D0 765 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 G3BP2Q9UN86 482 aaKnown RBP8.51□□□□□ -1.05
BRCA1-221ENST00000493795 ATP2B4P23634 1241 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 NFKBIAP25963 317 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 ARL4AP40617 200 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 XKR9Q5GH70 373 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 GJC2Q5T442 439 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-221ENST00000493795 C6orf118Q5T5N4 469 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 TEKT4Q8WW24 435 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 MAML1Q92585 1016 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 PHKBQ93100 1093 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 EPAS1Q99814 870 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 STMN3Q9NZ72 180 aa8.51□□□□□ -1.05
BRCA1-221ENST00000493795 IBTKQ9P2D0 1353 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms