RNA–Protein interactions for RNA: ENST00000493660.5

SMARCE1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-211ENST00000493660 MTMR7Q9Y216 660 aa8.17□□□□□ -1.1
SMARCE1-211ENST00000493660 RPS6KL1Q9Y6S9 549 aa8.17□□□□□ -1.1
SMARCE1-211ENST00000493660 PNMA6FA0A0J9YX94 578 aa8.16□□□□□ -1.1
SMARCE1-211ENST00000493660 UBE2Q2LH0YL09 131 aa8.16□□□□□ -1.1
SMARCE1-211ENST00000493660 STXBP3O00186 592 aa8.16□□□□□ -1.1
SMARCE1-211ENST00000493660 ATP8B1O43520 1251 aa8.16□□□□□ -1.1
SMARCE1-211ENST00000493660 SMC2O95347 1197 aa8.16□□□□□ -1.1
SMARCE1-211ENST00000493660 USP14P54578 494 aa8.16□□□□□ -1.1
SMARCE1-211ENST00000493660 INHBEP58166 350 aa8.16□□□□□ -1.1
SMARCE1-211ENST00000493660 TRAF1Q13077 416 aa8.16□□□□□ -1.1
SMARCE1-211ENST00000493660 MYSM1Q5VVJ2 828 aa8.16□□□□□ -1.1
SMARCE1-211ENST00000493660 FBXO38Q6PIJ6 1188 aa8.16□□□□□ -1.1
SMARCE1-211ENST00000493660 RASGRP2Q7LDG7 609 aa8.16□□□□□ -1.1
SMARCE1-211ENST00000493660 FAM160B2Q86V87 743 aa8.16□□□□□ -1.1
SMARCE1-211ENST00000493660 FMNL3Q8IVF7 1028 aa8.16□□□□□ -1.1
SMARCE1-211ENST00000493660 NOSTRINQ8IVI9 506 aa8.16□□□□□ -1.1
SMARCE1-211ENST00000493660 DIS3L2Q8IYB7 885 aaKnown RBP8.16□□□□□ -1.1
SMARCE1-211ENST00000493660 ADGRF4Q8IZF3 695 aa8.16□□□□□ -1.1
SMARCE1-211ENST00000493660 ACER1Q8TDN7 264 aa8.16□□□□□ -1.1
SMARCE1-211ENST00000493660 JMJD4Q9H9V9 463 aa8.16□□□□□ -1.1
SMARCE1-211ENST00000493660 VPS54Q9P1Q0 977 aa8.16□□□□□ -1.1
SMARCE1-211ENST00000493660 SCAF8Q9UPN6 1271 aaKnown RBP8.16□□□□□ -1.1
SMARCE1-211ENST00000493660 CNPY2Q9Y2B0 182 aa8.16□□□□□ -1.1
SMARCE1-211ENST00000493660 TRPM7Q96QT4 1865 aa8.16□□□□□ -1.1
SMARCE1-211ENST00000493660 UNCXA6NJT0 531 aa8.15□□□□□ -1.1
SMARCE1-211ENST00000493660 KIF28PB7ZC32 967 aa8.15□□□□□ -1.1
SMARCE1-211ENST00000493660 ADM5C9JUS6 153 aa8.15□□□□□ -1.1
SMARCE1-211ENST00000493660 KIF2AO00139 706 aaPredicted RBP8.15□□□□□ -1.1
SMARCE1-211ENST00000493660 WDR46O15213 610 aaKnown RBP8.15□□□□□ -1.1
SMARCE1-211ENST00000493660 PPP1R12BO60237 982 aaPredicted RBP8.15□□□□□ -1.1
SMARCE1-211ENST00000493660 USP2O75604 605 aaPredicted RBP8.15□□□□□ -1.1
SMARCE1-211ENST00000493660 ADCY5O95622 1261 aa8.15□□□□□ -1.1
SMARCE1-211ENST00000493660 INPP5BP32019 993 aa8.15□□□□□ -1.1
SMARCE1-211ENST00000493660 ECE1P42892 770 aa8.15□□□□□ -1.1
SMARCE1-211ENST00000493660 NLRP5P59047 1200 aa8.15□□□□□ -1.1
SMARCE1-211ENST00000493660 ZRSR1Q15695 479 aaKnown RBP8.15□□□□□ -1.1
SMARCE1-211ENST00000493660 MAP3K11Q16584 847 aa8.15□□□□□ -1.1
SMARCE1-211ENST00000493660 SYDE2Q5VT97 1194 aa8.15□□□□□ -1.1
SMARCE1-211ENST00000493660 WWC2Q6AWC2 1192 aa8.15□□□□□ -1.1
SMARCE1-211ENST00000493660 KCTD1Q719H9 257 aa8.15□□□□□ -1.1
SMARCE1-211ENST00000493660 RNF214Q8ND24 703 aa8.15□□□□□ -1.1
SMARCE1-211ENST00000493660 CHURC1Q8WUH1 139 aa8.15□□□□□ -1.1
SMARCE1-211ENST00000493660 SHISA4Q96DD7 197 aa8.15□□□□□ -1.1
SMARCE1-211ENST00000493660 CDCA5Q96FF9 252 aa8.15□□□□□ -1.1
SMARCE1-211ENST00000493660 PIGSQ96S52 555 aa8.15□□□□□ -1.1
SMARCE1-211ENST00000493660 SUDS3Q9H7L9 328 aaPredicted RBP8.15□□□□□ -1.1
SMARCE1-211ENST00000493660 GJB4Q9NTQ9 266 aa8.15□□□□□ -1.1
SMARCE1-211ENST00000493660 USP25Q9UHP3 1055 aa8.15□□□□□ -1.1
SMARCE1-211ENST00000493660 PCDHA4Q9UN74 947 aa8.15□□□□□ -1.1
SMARCE1-211ENST00000493660 KCNJ14Q9UNX9 436 aa8.15□□□□□ -1.1
SMARCE1-211ENST00000493660 hCG_1642624A0A1W2PR95 340 aa8.15□□□□□ -1.1
SMARCE1-211ENST00000493660 C19orf81C9J6K1 198 aa8.15□□□□□ -1.1
SMARCE1-211ENST00000493660 ZBTB5O15062 677 aa8.15□□□□□ -1.1
SMARCE1-211ENST00000493660 EIF3JO75822 258 aaKnown RBP8.15□□□□□ -1.1
SMARCE1-211ENST00000493660 YEATS4O95619 227 aa8.15□□□□□ -1.1
SMARCE1-211ENST00000493660 PTPRAP18433 802 aa8.15□□□□□ -1.1
SMARCE1-211ENST00000493660 GNA11P29992 359 aa8.15□□□□□ -1.1
SMARCE1-211ENST00000493660 IREB2P48200 963 aaKnown RBP8.15□□□□□ -1.1
SMARCE1-211ENST00000493660 MAP3K9P80192 1104 aa8.15□□□□□ -1.1
SMARCE1-211ENST00000493660 ADCY2Q08462 1091 aa8.15□□□□□ -1.1
SMARCE1-211ENST00000493660 NPY5RQ15761 445 aa8.15□□□□□ -1.1
SMARCE1-211ENST00000493660 HEATR3Q7Z4Q2 680 aa8.15□□□□□ -1.1
SMARCE1-211ENST00000493660 BICD2Q8TD16 824 aa8.15□□□□□ -1.1
SMARCE1-211ENST00000493660 TNFRSF25Q93038 417 aa8.15□□□□□ -1.1
SMARCE1-211ENST00000493660 C12orf42Q96LP6 360 aa8.15□□□□□ -1.1
SMARCE1-211ENST00000493660 UBA5Q9GZZ9 404 aa8.15□□□□□ -1.1
SMARCE1-211ENST00000493660 ZMYND12Q9H0C1 365 aa8.15□□□□□ -1.1
SMARCE1-211ENST00000493660 GLT8D2Q9H1C3 349 aa8.15□□□□□ -1.1
SMARCE1-211ENST00000493660 POLR3EQ9NVU0 708 aa8.15□□□□□ -1.1
SMARCE1-211ENST00000493660 RTEL1Q9NZ71 1219 aa8.15□□□□□ -1.1
SMARCE1-211ENST00000493660 FEM1BQ9UK73 627 aa8.15□□□□□ -1.1
SMARCE1-211ENST00000493660 PYCARDQ9ULZ3 195 aa8.15□□□□□ -1.1
SMARCE1-211ENST00000493660 RLFQ13129 1914 aa8.14□□□□□ -1.11
SMARCE1-211ENST00000493660 BTBD18B2RXH4 712 aa8.14□□□□□ -1.11
SMARCE1-211ENST00000493660 USP17L10C9JJH3 530 aa8.14□□□□□ -1.11
SMARCE1-211ENST00000493660 VEGFAP15692 232 aaPredicted RBP8.14□□□□□ -1.11
SMARCE1-211ENST00000493660 H2AFXP16104 143 aaPredicted RBP8.14□□□□□ -1.11
SMARCE1-211ENST00000493660 STAT2P52630 851 aa8.14□□□□□ -1.11
SMARCE1-211ENST00000493660 CORO7P57737 925 aa8.14□□□□□ -1.11
SMARCE1-211ENST00000493660 RILPL1Q5EBL4 403 aa8.14□□□□□ -1.11
SMARCE1-211ENST00000493660 AP1ARQ63HQ0 302 aa8.14□□□□□ -1.11
SMARCE1-211ENST00000493660 TTBK2Q6IQ55 1244 aa8.14□□□□□ -1.11
SMARCE1-211ENST00000493660 BLIDQ8IZY5 108 aa8.14□□□□□ -1.11
SMARCE1-211ENST00000493660 ZNF280CQ8ND82 737 aa8.14□□□□□ -1.11
SMARCE1-211ENST00000493660 LEO1Q8WVC0 666 aaPredicted RBP8.14□□□□□ -1.11
SMARCE1-211ENST00000493660 EXOC4Q96A65 974 aa8.14□□□□□ -1.11
SMARCE1-211ENST00000493660 SPATA32Q96LK8 384 aa8.14□□□□□ -1.11
SMARCE1-211ENST00000493660 C6orf50Q9HD87 102 aa8.14□□□□□ -1.11
SMARCE1-211ENST00000493660 PCDH10Q9P2E7 1040 aa8.14□□□□□ -1.11
SMARCE1-211ENST00000493660 RCOR1Q9UKL0 485 aa8.14□□□□□ -1.11
SMARCE1-211ENST00000493660 FHOD1Q9Y613 1164 aa8.14□□□□□ -1.11
SMARCE1-211ENST00000493660 TMEM232C9JQI7 657 aa8.14□□□□□ -1.11
SMARCE1-211ENST00000493660 FIBPO43427 364 aa8.14□□□□□ -1.11
SMARCE1-211ENST00000493660 PRPF40AO75400 957 aaKnown RBP8.14□□□□□ -1.11
SMARCE1-211ENST00000493660 RPS6KA5O75582 802 aa8.14□□□□□ -1.11
SMARCE1-211ENST00000493660 FDX1P10109 184 aa8.14□□□□□ -1.11
SMARCE1-211ENST00000493660 ACTN2P35609 894 aa8.14□□□□□ -1.11
SMARCE1-211ENST00000493660 PLA2G4AP47712 749 aa8.14□□□□□ -1.11
SMARCE1-211ENST00000493660 TRAPPC10P48553 1259 aa8.14□□□□□ -1.11
SMARCE1-211ENST00000493660 NAPAP54920 295 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms