RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 MMP19Q99542 508 aa13.44□□□□□ -0.26
CTSA-209ENST00000493522 AGXT2Q9BYV1 514 aa13.44□□□□□ -0.26
CTSA-209ENST00000493522 ACAD9Q9H845 621 aa13.44□□□□□ -0.26
CTSA-209ENST00000493522 JMJD4Q9H9V9 463 aa13.44□□□□□ -0.26
CTSA-209ENST00000493522 RBM28Q9NW13 759 aaKnown RBP13.44□□□□□ -0.26
CTSA-209ENST00000493522 FCER1AP12319 257 aa13.43□□□□□ -0.26
CTSA-209ENST00000493522 ADORA2AP29274 412 aa13.43□□□□□ -0.26
CTSA-209ENST00000493522 CYP2C19P33261 490 aa13.43□□□□□ -0.26
CTSA-209ENST00000493522 RCAN1P53805 252 aa13.43□□□□□ -0.26
CTSA-209ENST00000493522 SLC35G1Q2M3R5 365 aa13.43□□□□□ -0.26
CTSA-209ENST00000493522 TKFCQ3LXA3 575 aa13.43□□□□□ -0.26
CTSA-209ENST00000493522 TMTC3Q6ZXV5 915 aa13.43□□□□□ -0.26
CTSA-209ENST00000493522 NOL8Q76FK4 1167 aaKnown RBP13.43□□□□□ -0.26
CTSA-209ENST00000493522 DPP9Q86TI2 863 aa13.43□□□□□ -0.26
CTSA-209ENST00000493522 CMTR1Q8N1G2 835 aaKnown RBP13.43□□□□□ -0.26
CTSA-209ENST00000493522 FBXL16Q8N461 479 aa13.43□□□□□ -0.26
CTSA-209ENST00000493522 FANCBQ8NB91 859 aa13.43□□□□□ -0.26
CTSA-209ENST00000493522 CHST13Q8NET6 341 aa13.43□□□□□ -0.26
CTSA-209ENST00000493522 TRERF1Q96PN7 1200 aa13.43□□□□□ -0.26
CTSA-209ENST00000493522 PIGSQ96S52 555 aa13.43□□□□□ -0.26
CTSA-209ENST00000493522 LZTS2Q9BRK4 669 aa13.43□□□□□ -0.26
CTSA-209ENST00000493522 SPZ1Q9BXG8 430 aa13.43□□□□□ -0.26
CTSA-209ENST00000493522 BACH2Q9BYV9 841 aa13.43□□□□□ -0.26
CTSA-209ENST00000493522 FBXO40Q9UH90 709 aa13.43□□□□□ -0.26
CTSA-209ENST00000493522 PNMA2Q9UL42 364 aa13.43□□□□□ -0.26
CTSA-209ENST00000493522 NID2Q14112 1375 aa13.43□□□□□ -0.26
CTSA-209ENST00000493522 CNTNAP5Q8WYK1 1306 aa13.42□□□□□ -0.26
CTSA-209ENST00000493522 ZBTB5O15062 677 aa13.42□□□□□ -0.26
CTSA-209ENST00000493522 CYTH3O43739 400 aa13.42□□□□□ -0.26
CTSA-209ENST00000493522 STRNO43815 780 aa13.42□□□□□ -0.26
CTSA-209ENST00000493522 RBM25P49756 843 aaKnown RBP13.42□□□□□ -0.26
CTSA-209ENST00000493522 NEK4P51957 841 aa13.42□□□□□ -0.26
CTSA-209ENST00000493522 ATN1P54259 1190 aaPredicted RBP13.42□□□□□ -0.26
CTSA-209ENST00000493522 AK2P54819 239 aa13.42□□□□□ -0.26
CTSA-209ENST00000493522 FAM109BQ6ICB4 259 aaPredicted RBP13.42□□□□□ -0.26
CTSA-209ENST00000493522 FBXO11Q86XK2 927 aa13.42□□□□□ -0.26
CTSA-209ENST00000493522 RRP36Q96EU6 259 aaKnown RBP13.42□□□□□ -0.26
CTSA-209ENST00000493522 LARP6Q9BRS8 491 aaKnown RBP13.42□□□□□ -0.26
CTSA-209ENST00000493522 RIOX1Q9H6W3 641 aa13.42□□□□□ -0.26
CTSA-209ENST00000493522 SEC63Q9UGP8 760 aaKnown RBP13.42□□□□□ -0.26
CTSA-209ENST00000493522 ABCB11O95342 1321 aa13.41□□□□□ -0.26
CTSA-209ENST00000493522 KIAA1217Q5T5P2 1943 aa13.41□□□□□ -0.26
CTSA-209ENST00000493522 KBTBD13C9JR72 458 aa13.41□□□□□ -0.26
CTSA-209ENST00000493522 PGK2P07205 417 aa13.41□□□□□ -0.26
CTSA-209ENST00000493522 CYBAP13498 195 aa13.41□□□□□ -0.26
CTSA-209ENST00000493522 RTP1P59025 263 aa13.41□□□□□ -0.26
CTSA-209ENST00000493522 ANKRD1Q15327 319 aa13.41□□□□□ -0.26
CTSA-209ENST00000493522 MUM1L1Q5H9M0 696 aa13.41□□□□□ -0.26
CTSA-209ENST00000493522 OLFML2BQ68BL8 750 aa13.41□□□□□ -0.26
CTSA-209ENST00000493522 NSMFQ6X4W1 530 aa13.41□□□□□ -0.26
CTSA-209ENST00000493522 ABRAQ8N0Z2 381 aa13.41□□□□□ -0.26
CTSA-209ENST00000493522 ANKRD35Q8N283 1001 aa13.41□□□□□ -0.26
CTSA-209ENST00000493522 CCDC82Q8N4S0 544 aa13.41□□□□□ -0.26
CTSA-209ENST00000493522 SRBD1Q8N5C6 995 aaKnown RBP13.41□□□□□ -0.26
CTSA-209ENST00000493522 ARRDC4Q8NCT1 418 aa13.41□□□□□ -0.26
CTSA-209ENST00000493522 NPLOC4Q8TAT6 608 aa13.41□□□□□ -0.26
CTSA-209ENST00000493522 MTMR8Q96EF0 704 aa13.41□□□□□ -0.26
CTSA-209ENST00000493522 DDX11Q96FC9 970 aa13.41□□□□□ -0.26
CTSA-209ENST00000493522 AMNQ9BXJ7 453 aa13.41□□□□□ -0.26
CTSA-209ENST00000493522 SLC5A4Q9NY91 659 aa13.41□□□□□ -0.26
CTSA-209ENST00000493522 CCDC196A0A1B0GTZ2 297 aa13.4□□□□□ -0.26
CTSA-209ENST00000493522 POTEB2H3BUK9 544 aa13.4□□□□□ -0.26
CTSA-209ENST00000493522 NFIBO00712 420 aa13.4□□□□□ -0.26
CTSA-209ENST00000493522 SMARCA1P28370 1054 aa13.4□□□□□ -0.26
CTSA-209ENST00000493522 CDC27P30260 824 aa13.4□□□□□ -0.26
CTSA-209ENST00000493522 CCT2P78371 535 aaKnown RBP13.4□□□□□ -0.26
CTSA-209ENST00000493522 STK3Q13188 491 aa13.4□□□□□ -0.26
CTSA-209ENST00000493522 TRPV1Q8NER1 839 aa13.4□□□□□ -0.26
CTSA-209ENST00000493522 TBC1D32Q96NH3 1257 aa13.4□□□□□ -0.26
CTSA-209ENST00000493522 NCOA5Q9HCD5 579 aaKnown RBP13.4□□□□□ -0.26
CTSA-209ENST00000493522 A1CFQ9NQ94 594 aaKnown RBP13.4□□□□□ -0.26
CTSA-209ENST00000493522 ATP11BQ9Y2G3 1177 aa13.4□□□□□ -0.26
CTSA-209ENST00000493522 PRUNE2Q8WUY3 3088 aa13.4□□□□□ -0.26
CTSA-209ENST00000493522 SPTBN5Q9NRC6 3674 aaKnown RBP13.39□□□□□ -0.27
CTSA-209ENST00000493522 PNMA6FA0A0J9YX94 578 aa13.39□□□□□ -0.27
CTSA-209ENST00000493522 hCG_1642624A0A1W2PR95 340 aa13.39□□□□□ -0.27
CTSA-209ENST00000493522 PTPDC1A2A3K4 754 aa13.39□□□□□ -0.27
CTSA-209ENST00000493522 SEPT4O43236 478 aa13.39□□□□□ -0.27
CTSA-209ENST00000493522 PPP1R11O60927 126 aaPredicted RBP13.39□□□□□ -0.27
CTSA-209ENST00000493522 COBLO75128 1261 aa13.39□□□□□ -0.27
CTSA-209ENST00000493522 PDIA3P30101 505 aaKnown RBP13.39□□□□□ -0.27
CTSA-209ENST00000493522 EVCP57679 992 aa13.39□□□□□ -0.27
CTSA-209ENST00000493522 PPP2R5BQ15173 497 aa13.39□□□□□ -0.27
CTSA-209ENST00000493522 RABEP1Q15276 862 aa13.39□□□□□ -0.27
CTSA-209ENST00000493522 GJC2Q5T442 439 aaPredicted RBP13.39□□□□□ -0.27
CTSA-209ENST00000493522 ZNF697Q5TEC3 545 aa13.39□□□□□ -0.27
CTSA-209ENST00000493522 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.39□□□□□ -0.27
CTSA-209ENST00000493522 KIF2CQ99661 725 aa13.39□□□□□ -0.27
CTSA-209ENST00000493522 ALDH8A1Q9H2A2 487 aaPredicted RBP13.39□□□□□ -0.27
CTSA-209ENST00000493522 MRPL11Q9Y3B7 192 aaKnown RBP13.39□□□□□ -0.27
CTSA-209ENST00000493522 IGHA2P01877 340 aa13.38□□□□□ -0.27
CTSA-209ENST00000493522 ADD1P35611 737 aaKnown RBP13.38□□□□□ -0.27
CTSA-209ENST00000493522 TRAF1Q13077 416 aa13.38□□□□□ -0.27
CTSA-209ENST00000493522 SLC30A10Q6XR72 485 aa13.38□□□□□ -0.27
CTSA-209ENST00000493522 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.38□□□□□ -0.27
CTSA-209ENST00000493522 CLEC4DQ8WXI8 215 aa13.38□□□□□ -0.27
CTSA-209ENST00000493522 ZNF274Q96GC6 653 aaPredicted RBP13.38□□□□□ -0.27
CTSA-209ENST00000493522 GUCD1Q96NT3 240 aa13.38□□□□□ -0.27
CTSA-209ENST00000493522 PRDM5Q9NQX1 630 aaPredicted RBP13.38□□□□□ -0.27
CTSA-209ENST00000493522 FAM217BQ9NTX9 383 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms