RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 PPP1R2P3Q6NXS1 205 aa17.84■□□□□ 0.45
BRAT1-206ENST00000493232 POMGNT1Q8WZA1 660 aa17.84■□□□□ 0.45
BRAT1-206ENST00000493232 CCDC127Q96BQ5 260 aa17.84■□□□□ 0.45
BRAT1-206ENST00000493232 TRIM11Q96F44 468 aa17.84■□□□□ 0.45
BRAT1-206ENST00000493232 PLEKHG1Q9ULL1 1385 aa17.83■□□□□ 0.45
BRAT1-206ENST00000493232 WDR17Q8IZU2 1322 aa17.83■□□□□ 0.45
BRAT1-206ENST00000493232 MYL7Q01449 175 aa17.83■□□□□ 0.45
BRAT1-206ENST00000493232 PLCB4Q15147 1175 aa17.83■□□□□ 0.45
BRAT1-206ENST00000493232 SH2D4BQ5SQS7 431 aa17.83■□□□□ 0.45
BRAT1-206ENST00000493232 FANCLQ9NW38 375 aa17.83■□□□□ 0.45
BRAT1-206ENST00000493232 GOLGA8CPA6NN73 597 aa17.83■□□□□ 0.45
BRAT1-206ENST00000493232 LMNB1P20700 586 aa17.83■□□□□ 0.45
BRAT1-206ENST00000493232 HOXA7P31268 230 aaPredicted RBP17.83■□□□□ 0.45
BRAT1-206ENST00000493232 SCRN1Q12765 414 aa17.83■□□□□ 0.45
BRAT1-206ENST00000493232 ARHGEF6Q15052 776 aa17.83■□□□□ 0.45
BRAT1-206ENST00000493232 ANKRD42Q8N9B4 389 aa17.83■□□□□ 0.45
BRAT1-206ENST00000493232 NT5C1BQ96P26 610 aa17.83■□□□□ 0.45
BRAT1-206ENST00000493232 IFT122Q9HBG6 1241 aa17.83■□□□□ 0.45
BRAT1-206ENST00000493232 DBNLQ9UJU6 430 aaKnown RBP17.83■□□□□ 0.44
BRAT1-206ENST00000493232 COPB1P53618 953 aaKnown RBP17.83■□□□□ 0.44
BRAT1-206ENST00000493232 BFSP1Q12934 665 aa17.83■□□□□ 0.44
BRAT1-206ENST00000493232 SLC39A14Q15043 492 aa17.83■□□□□ 0.44
BRAT1-206ENST00000493232 SEPT14Q6ZU15 432 aa17.83■□□□□ 0.44
BRAT1-206ENST00000493232 LARP4BQ92615 738 aaKnown RBP17.83■□□□□ 0.44
BRAT1-206ENST00000493232 DHTKD1Q96HY7 919 aaPredicted RBP17.83■□□□□ 0.44
BRAT1-206ENST00000493232 KANSL2Q9H9L4 492 aa17.83■□□□□ 0.44
BRAT1-206ENST00000493232 KIAA1024Q9UPX6 916 aa17.83■□□□□ 0.44
BRAT1-206ENST00000493232 ATP7BP35670 1465 aa17.82■□□□□ 0.44
BRAT1-206ENST00000493232 NDUFA8P51970 172 aa17.82■□□□□ 0.44
BRAT1-206ENST00000493232 ZNF827Q17R98 1081 aa17.82■□□□□ 0.44
BRAT1-206ENST00000493232 PNMA8AQ86V59 439 aaPredicted RBP17.82■□□□□ 0.44
BRAT1-206ENST00000493232 CCDC13Q8IYE1 715 aa17.82■□□□□ 0.44
BRAT1-206ENST00000493232 DTNBO60941 627 aa17.82■□□□□ 0.44
BRAT1-206ENST00000493232 ATF2P15336 505 aa17.82■□□□□ 0.44
BRAT1-206ENST00000493232 CLIC6Q96NY7 704 aa17.82■□□□□ 0.44
BRAT1-206ENST00000493232 RPS6KC1Q96S38 1066 aa17.82■□□□□ 0.44
BRAT1-206ENST00000493232 ADD3Q9UEY8 706 aaKnown RBP17.82■□□□□ 0.44
BRAT1-206ENST00000493232 ABCC12Q96J65 1359 aa17.82■□□□□ 0.44
BRAT1-206ENST00000493232 GUCY2FP51841 1108 aa17.82■□□□□ 0.44
BRAT1-206ENST00000493232 LMNB2Q03252 620 aa17.82■□□□□ 0.44
BRAT1-206ENST00000493232 CC2D2BQ6DHV5 1058 aa17.82■□□□□ 0.44
BRAT1-206ENST00000493232 RSPH3Q86UC2 560 aa17.82■□□□□ 0.44
BRAT1-206ENST00000493232 OSBPL3Q9H4L5 887 aa17.82■□□□□ 0.44
BRAT1-206ENST00000493232 ANKFY1Q9P2R3 1169 aa17.82■□□□□ 0.44
BRAT1-206ENST00000493232 IGSF1Q8N6C5 1336 aa17.82■□□□□ 0.44
BRAT1-206ENST00000493232 PASKQ96RG2 1323 aa17.82■□□□□ 0.44
BRAT1-206ENST00000493232 EIF3CLB5ME19 914 aaKnown RBP17.82■□□□□ 0.44
BRAT1-206ENST00000493232 ADORA1P30542 326 aa17.82■□□□□ 0.44
BRAT1-206ENST00000493232 APOA5Q6Q788 366 aa17.82■□□□□ 0.44
BRAT1-206ENST00000493232 CDHR1Q96JP9 859 aa17.82■□□□□ 0.44
BRAT1-206ENST00000493232 EIF3CQ99613 913 aaKnown RBP17.82■□□□□ 0.44
BRAT1-206ENST00000493232 DESI2Q9BSY9 194 aa17.82■□□□□ 0.44
BRAT1-206ENST00000493232 NBPF3Q9H094 633 aa17.82■□□□□ 0.44
BRAT1-206ENST00000493232 KLHL14Q9P2G3 628 aa17.82■□□□□ 0.44
BRAT1-206ENST00000493232 CLASP1Q7Z460 1538 aa17.82■□□□□ 0.44
BRAT1-206ENST00000493232 HNRNPDLO14979 420 aaKnown RBP17.81■□□□□ 0.44
BRAT1-206ENST00000493232 BUB1O43683 1085 aa17.81■□□□□ 0.44
BRAT1-206ENST00000493232 EEF1GP26641 437 aaKnown RBP17.81■□□□□ 0.44
BRAT1-206ENST00000493232 GJA10Q969M2 543 aa17.81■□□□□ 0.44
BRAT1-206ENST00000493232 CNOT6LQ96LI5 555 aaKnown RBP17.81■□□□□ 0.44
BRAT1-206ENST00000493232 CCDC68Q9H2F9 335 aa17.81■□□□□ 0.44
BRAT1-206ENST00000493232 CLIC4Q9Y696 253 aa17.81■□□□□ 0.44
BRAT1-206ENST00000493232 IGSF3O75054 1194 aa17.81■□□□□ 0.44
BRAT1-206ENST00000493232 NT5C2P49902 561 aa17.81■□□□□ 0.44
BRAT1-206ENST00000493232 ETF1P62495 437 aaKnown RBP17.81■□□□□ 0.44
BRAT1-206ENST00000493232 IRX4P78413 519 aa17.81■□□□□ 0.44
BRAT1-206ENST00000493232 APBA1Q02410 837 aa17.81■□□□□ 0.44
BRAT1-206ENST00000493232 CYP4A11Q02928 519 aa17.81■□□□□ 0.44
BRAT1-206ENST00000493232 SLC7A3Q8WY07 619 aa17.81■□□□□ 0.44
BRAT1-206ENST00000493232 IPO11Q9UI26 975 aaKnown RBP17.81■□□□□ 0.44
BRAT1-206ENST00000493232 EPN1Q9Y6I3 576 aaPredicted RBP17.81■□□□□ 0.44
BRAT1-206ENST00000493232 TMEM94Q12767 1356 aa17.81■□□□□ 0.44
BRAT1-206ENST00000493232 EFCAB8A8MWE9 144 aa17.81■□□□□ 0.44
BRAT1-206ENST00000493232 HGSO14964 777 aaPredicted RBP17.81■□□□□ 0.44
BRAT1-206ENST00000493232 MYL1P05976 194 aa17.81■□□□□ 0.44
BRAT1-206ENST00000493232 OSBPP22059 807 aa17.81■□□□□ 0.44
BRAT1-206ENST00000493232 GARSP41250 739 aaKnown RBP17.81■□□□□ 0.44
BRAT1-206ENST00000493232 SATB1Q01826 763 aa17.81■□□□□ 0.44
BRAT1-206ENST00000493232 FAM196AQ6ZSG2 479 aa17.81■□□□□ 0.44
BRAT1-206ENST00000493232 STK17AQ9UEE5 414 aa17.81■□□□□ 0.44
BRAT1-206ENST00000493232 SUPT20HL1Q3ZLR7 823 aa17.81■□□□□ 0.44
BRAT1-206ENST00000493232 ARHGEF25Q86VW2 580 aa17.81■□□□□ 0.44
BRAT1-206ENST00000493232 RETREG2Q8NC44 543 aa17.81■□□□□ 0.44
BRAT1-206ENST00000493232 ZNF577Q9BSK1 485 aa17.81■□□□□ 0.44
BRAT1-206ENST00000493232 PUS3Q9BZE2 481 aaKnown RBP17.81■□□□□ 0.44
BRAT1-206ENST00000493232 DHX36Q9H2U1 1008 aaKnown RBP17.81■□□□□ 0.44
BRAT1-206ENST00000493232 A6NJR5 290 aa17.8■□□□□ 0.44
BRAT1-206ENST00000493232 THAP12O43422 761 aa17.8■□□□□ 0.44
BRAT1-206ENST00000493232 POLR3EQ9NVU0 708 aa17.8■□□□□ 0.44
BRAT1-206ENST00000493232 TARBP1Q13395 1621 aaKnown RBP17.8■□□□□ 0.44
BRAT1-206ENST00000493232 PTPREP23469 700 aa17.8■□□□□ 0.44
BRAT1-206ENST00000493232 PSMC2P35998 433 aaKnown RBP17.8■□□□□ 0.44
BRAT1-206ENST00000493232 CDKL2Q92772 493 aa17.8■□□□□ 0.44
BRAT1-206ENST00000493232 SEPT9Q9UHD8 586 aaPredicted RBP17.8■□□□□ 0.44
BRAT1-206ENST00000493232 ABL1P00519 1130 aa17.8■□□□□ 0.44
BRAT1-206ENST00000493232 MGARPQ8TDB4 240 aa17.8■□□□□ 0.44
BRAT1-206ENST00000493232 ZBTB1Q9Y2K1 713 aa17.8■□□□□ 0.44
BRAT1-206ENST00000493232 EFCAB6Q5THR3 1501 aa17.8■□□□□ 0.44
BRAT1-206ENST00000493232 ITKQ08881 620 aa17.8■□□□□ 0.44
BRAT1-206ENST00000493232 ACCSQ96QU6 501 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms