RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 SYNPOQ8N3V7 929 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 IPMKQ8NFU5 416 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 PPP1R14CQ8TAE6 165 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 SSH3Q8TE77 659 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 GCC1Q96CN9 775 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 ANAPC16Q96DE5 110 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 BICD1Q96G01 975 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 RADILQ96JH8 1075 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 CNDP1Q96KN2 507 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 CNDP2Q96KP4 475 aaKnown RBP4.76□□□□□ -1.65
BRCA1-220ENST00000492859 TNIP3Q96KP6 325 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 DMRTB1Q96MA1 342 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 ASB2Q96Q27 587 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 CITED4Q96RK1 184 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 SH3GL1Q99961 368 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 NAA15Q9BXJ9 866 aaKnown RBP4.76□□□□□ -1.65
BRCA1-220ENST00000492859 TAOK3Q9H2K8 898 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 TCP11L1Q9NUJ3 509 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 UBAP1Q9NZ09 502 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 HCN4Q9Y3Q4 1203 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 ANGPTL3Q9Y5C1 460 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 BTBD11A6QL63 1104 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 GSG1L2A8MUP6 293 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 LACTBL1A8MY62 500 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 ESPNB1AK53 854 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 P4HA2O15460 535 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 SGSM2O43147 1006 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 FAM13AO94988 1023 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 MAP3K6O95382 1288 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 TGDSO95455 350 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 STAMBPO95630 424 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 CPP00450 1065 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 GNRH1P01148 92 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 CYP11A1P05108 521 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 HSD3B1P14060 373 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 FERP16591 822 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 GCGRP47871 477 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 MCM2P49736 904 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 ALDH5A1P51649 535 aaPredicted RBP4.75□□□□□ -1.65
BRCA1-220ENST00000492859 SLC9A5Q14940 896 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 CCDC152Q4G0S7 254 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 SFMBT2Q5VUG0 894 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 USPL1Q5W0Q7 1092 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 WWC2Q6AWC2 1192 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 POMZP3Q6PJE2 187 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 C4orf50Q6ZRC1 276 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 ERMP1Q7Z2K6 904 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 CCDC186Q7Z3E2 898 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.75□□□□□ -1.65
BRCA1-220ENST00000492859 SH3RF1Q7Z6J0 888 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 EPHX4Q8IUS5 362 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 SLC7A5P1Q8MH63 180 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 CCAR2Q8N163 923 aaKnown RBP4.75□□□□□ -1.65
BRCA1-220ENST00000492859 LINC00469Q8N7U9 141 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 USP38Q8NB14 1042 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 TNIP2Q8NFZ5 429 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 RIN3Q8TB24 985 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 KCTD13Q8WZ19 329 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 CCT6BQ92526 530 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 HDAC2Q92769 488 aaKnown RBP4.75□□□□□ -1.65
BRCA1-220ENST00000492859 FAM129BQ96TA1 746 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 CHCHD6Q9BRQ6 235 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 GPATCH1Q9BRR8 931 aaKnown RBP4.75□□□□□ -1.65
BRCA1-220ENST00000492859 NTPCRQ9BSD7 190 aaKnown RBP4.75□□□□□ -1.65
BRCA1-220ENST00000492859 PI4K2AQ9BTU6 479 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 TEX13BQ9BXU2 312 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 SEMA4AQ9H3S1 761 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 TRPV4Q9HBA0 871 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 PRDM9Q9NQV7 894 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 SLC5A4Q9NY91 659 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 ZC3H7BQ9UGR2 993 aaKnown RBP4.75□□□□□ -1.65
BRCA1-220ENST00000492859 EIF2B4Q9UI10 523 aaKnown RBP4.75□□□□□ -1.65
BRCA1-220ENST00000492859 GJD2Q9UKL4 321 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 COG5Q9UP83 839 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 KIAA1024Q9UPX6 916 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 SLC27A5Q9Y2P5 690 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 R3HCC1Q9Y3T6 440 aaKnown RBP4.75□□□□□ -1.65
BRCA1-220ENST00000492859 TACC3Q9Y6A5 838 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 TNKSO95271 1327 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 RAD50Q92878 1312 aa4.75□□□□□ -1.65
BRCA1-220ENST00000492859 A0A087WZG4 1122 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 LOC102724428A0A0B4J2F2 783 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 KRBA1A5PL33 1030 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 LRRC72A6NJI9 287 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 GABRDO14764 452 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 SART1O43290 800 aaKnown RBP4.74□□□□□ -1.65
BRCA1-220ENST00000492859 ZBTB43O43298 467 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 FRS3O43559 492 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 AHCYL1O43865 530 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 NMT2O60551 498 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 DKC1O60832 514 aaKnown RBP eCLIP4.74□□□□□ -1.65
BRCA1-220ENST00000492859 ZNF254O75437 659 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 CAPNS1P04632 268 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 TNNT1P13805 278 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 AKR1B1P15121 316 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 STMN1P16949 149 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 MPSTP25325 297 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 PBLDP30039 288 aaPredicted RBP4.74□□□□□ -1.65
BRCA1-220ENST00000492859 CA8P35219 290 aa4.74□□□□□ -1.65
BRCA1-220ENST00000492859 ADH7P40394 386 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms