RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 MDM2Q00987 491 aaPredicted RBP13.76□□□□□ -0.21
MDC1-207ENST00000492462 TAPT1Q6NXT6 567 aa13.76□□□□□ -0.21
MDC1-207ENST00000492462 KIAA1211Q6ZU35 1233 aa13.76□□□□□ -0.21
MDC1-207ENST00000492462 MORC4Q8TE76 937 aa13.76□□□□□ -0.21
MDC1-207ENST00000492462 CCDC136Q96JN2 1154 aa13.76□□□□□ -0.21
MDC1-207ENST00000492462 LTBP2Q14767 1821 aa13.76□□□□□ -0.21
MDC1-207ENST00000492462 PALM3A6NDB9 673 aaPredicted RBP13.75□□□□□ -0.21
MDC1-207ENST00000492462 KLRF2D3W0D1 207 aa13.75□□□□□ -0.21
MDC1-207ENST00000492462 PPP1R11O60927 126 aaPredicted RBP13.75□□□□□ -0.21
MDC1-207ENST00000492462 C6orf222P0C671 652 aaPredicted RBP13.75□□□□□ -0.21
MDC1-207ENST00000492462 SMPD1P17405 629 aa13.75□□□□□ -0.21
MDC1-207ENST00000492462 HOXD11P31277 338 aaPredicted RBP13.75□□□□□ -0.21
MDC1-207ENST00000492462 ACLYP53396 1101 aa13.75□□□□□ -0.21
MDC1-207ENST00000492462 GJA9P57773 515 aa13.75□□□□□ -0.21
MDC1-207ENST00000492462 BEX3Q00994 111 aa13.75□□□□□ -0.21
MDC1-207ENST00000492462 TNFAIP2Q03169 654 aa13.75□□□□□ -0.21
MDC1-207ENST00000492462 TLE2Q04725 743 aa13.75□□□□□ -0.21
MDC1-207ENST00000492462 GRM4Q14833 912 aa13.75□□□□□ -0.21
MDC1-207ENST00000492462 WTAPQ15007 396 aa13.75□□□□□ -0.21
MDC1-207ENST00000492462 KCNA10Q16322 511 aa13.75□□□□□ -0.21
MDC1-207ENST00000492462 TMEM67Q5HYA8 995 aa13.75□□□□□ -0.21
MDC1-207ENST00000492462 SH3RF1Q7Z6J0 888 aa13.75□□□□□ -0.21
MDC1-207ENST00000492462 IGDCC4Q8TDY8 1250 aa13.75□□□□□ -0.21
MDC1-207ENST00000492462 UPF3AQ9H1J1 476 aaKnown RBP13.75□□□□□ -0.21
MDC1-207ENST00000492462 ANO2Q9NQ90 1003 aa13.75□□□□□ -0.21
MDC1-207ENST00000492462 COL20A1Q9P218 1284 aa13.75□□□□□ -0.21
MDC1-207ENST00000492462 PRUNE2Q8WUY3 3088 aa13.75□□□□□ -0.21
MDC1-207ENST00000492462 TROAPQ12815 778 aa13.74□□□□□ -0.21
MDC1-207ENST00000492462 NECTIN1Q15223 517 aa13.74□□□□□ -0.21
MDC1-207ENST00000492462 CREB3L3Q68CJ9 461 aa13.74□□□□□ -0.21
MDC1-207ENST00000492462 NOL8Q76FK4 1167 aaKnown RBP13.74□□□□□ -0.21
MDC1-207ENST00000492462 FBXO11Q86XK2 927 aa13.74□□□□□ -0.21
MDC1-207ENST00000492462 MTMR8Q96EF0 704 aa13.74□□□□□ -0.21
MDC1-207ENST00000492462 TSEN34Q9BSV6 310 aaKnown RBP13.74□□□□□ -0.21
MDC1-207ENST00000492462 MYL10Q9BUA6 226 aa13.74□□□□□ -0.21
MDC1-207ENST00000492462 ADD3Q9UEY8 706 aaKnown RBP13.74□□□□□ -0.21
MDC1-207ENST00000492462 PNMA2Q9UL42 364 aa13.74□□□□□ -0.21
MDC1-207ENST00000492462 GNEQ9Y223 722 aaKnown RBP13.74□□□□□ -0.21
MDC1-207ENST00000492462 ABCB11O95342 1321 aa13.73□□□□□ -0.21
MDC1-207ENST00000492462 ERICH2A1L162 156 aa13.73□□□□□ -0.21
MDC1-207ENST00000492462 OPLAHO14841 1288 aa13.73□□□□□ -0.21
MDC1-207ENST00000492462 PRC1O43663 620 aa13.73□□□□□ -0.21
MDC1-207ENST00000492462 CYTH3O43739 400 aa13.73□□□□□ -0.21
MDC1-207ENST00000492462 ASGR1P07306 291 aa13.73□□□□□ -0.21
MDC1-207ENST00000492462 CST5P28325 142 aaPredicted RBP13.73□□□□□ -0.21
MDC1-207ENST00000492462 BMP8BP34820 402 aa13.73□□□□□ -0.21
MDC1-207ENST00000492462 GNASQ5JWF2 1037 aa13.73□□□□□ -0.21
MDC1-207ENST00000492462 C1orf53Q5VUE5 145 aa13.73□□□□□ -0.21
MDC1-207ENST00000492462 SYTL5Q8TDW5 730 aaPredicted RBP13.73□□□□□ -0.21
MDC1-207ENST00000492462 TAAR1Q96RJ0 339 aa13.73□□□□□ -0.21
MDC1-207ENST00000492462 PIGSQ96S52 555 aa13.73□□□□□ -0.21
MDC1-207ENST00000492462 LY9Q9HBG7 655 aa13.73□□□□□ -0.21
MDC1-207ENST00000492462 VTA1Q9NP79 307 aa13.73□□□□□ -0.21
MDC1-207ENST00000492462 PRDM5Q9NQX1 630 aaPredicted RBP13.73□□□□□ -0.21
MDC1-207ENST00000492462 PDLIM7Q9NR12 457 aa13.73□□□□□ -0.21
MDC1-207ENST00000492462 TRIM43BA6NCK2 446 aa13.72□□□□□ -0.21
MDC1-207ENST00000492462 DYNC1LI2O43237 492 aaPredicted RBP13.72□□□□□ -0.21
MDC1-207ENST00000492462 PQBP1O60828 265 aaKnown RBP13.72□□□□□ -0.21
MDC1-207ENST00000492462 CDC45O75419 566 aa13.72□□□□□ -0.21
MDC1-207ENST00000492462 EDNRBP24530 442 aa13.72□□□□□ -0.21
MDC1-207ENST00000492462 ITGB8P26012 769 aa13.72□□□□□ -0.21
MDC1-207ENST00000492462 TLK2Q86UE8 772 aa13.72□□□□□ -0.21
MDC1-207ENST00000492462 HOMER1Q86YM7 354 aa13.72□□□□□ -0.21
MDC1-207ENST00000492462 RGS22Q8NE09 1264 aa13.72□□□□□ -0.21
MDC1-207ENST00000492462 NUP133Q8WUM0 1156 aa13.72□□□□□ -0.21
MDC1-207ENST00000492462 TRIM43Q96BQ3 446 aaPredicted RBP13.72□□□□□ -0.21
MDC1-207ENST00000492462 LRRC2Q9BYS8 371 aa13.72□□□□□ -0.21
MDC1-207ENST00000492462 UBE2OQ9C0C9 1292 aaKnown RBP13.72□□□□□ -0.21
MDC1-207ENST00000492462 STARD7Q9NQZ5 370 aa13.72□□□□□ -0.21
MDC1-207ENST00000492462 MOXD2PA6NHM9 499 aa13.71□□□□□ -0.21
MDC1-207ENST00000492462 SH2B2O14492 632 aaPredicted RBP13.71□□□□□ -0.21
MDC1-207ENST00000492462 ZBTB5O15062 677 aa13.71□□□□□ -0.21
MDC1-207ENST00000492462 NKX3-2P78367 333 aa13.71□□□□□ -0.21
MDC1-207ENST00000492462 PDE4DQ08499 809 aa13.71□□□□□ -0.21
MDC1-207ENST00000492462 SART3Q15020 963 aaKnown RBP13.71□□□□□ -0.21
MDC1-207ENST00000492462 FSCN1Q16658 493 aaKnown RBP13.71□□□□□ -0.21
MDC1-207ENST00000492462 IQSEC1Q6DN90 963 aa13.71□□□□□ -0.21
MDC1-207ENST00000492462 CXCL17Q6UXB2 119 aa13.71□□□□□ -0.21
MDC1-207ENST00000492462 RAB11FIP4Q86YS3 637 aa13.71□□□□□ -0.21
MDC1-207ENST00000492462 RASEFQ8IZ41 740 aa13.71□□□□□ -0.21
MDC1-207ENST00000492462 ZNF654Q8IZM8 581 aa13.71□□□□□ -0.21
MDC1-207ENST00000492462 PIBF1Q8WXW3 757 aa13.71□□□□□ -0.21
MDC1-207ENST00000492462 AMNQ9BXJ7 453 aa13.71□□□□□ -0.21
MDC1-207ENST00000492462 RIOX1Q9H6W3 641 aa13.71□□□□□ -0.21
MDC1-207ENST00000492462 SPC25Q9HBM1 224 aa13.71□□□□□ -0.21
MDC1-207ENST00000492462 MRPL11Q9Y3B7 192 aaKnown RBP13.71□□□□□ -0.21
MDC1-207ENST00000492462 RBM47A0AV96 593 aaKnown RBP13.7□□□□□ -0.22
MDC1-207ENST00000492462 RXRAP19793 462 aa13.7□□□□□ -0.22
MDC1-207ENST00000492462 MCM5P33992 734 aa13.7□□□□□ -0.22
MDC1-207ENST00000492462 DUSP28Q4G0W2 176 aa13.7□□□□□ -0.22
MDC1-207ENST00000492462 CATIPQ7Z7H3 387 aa13.7□□□□□ -0.22
MDC1-207ENST00000492462 PCSK9Q8NBP7 692 aaKnown RBP13.7□□□□□ -0.22
MDC1-207ENST00000492462 DNERQ8NFT8 737 aa13.7□□□□□ -0.22
MDC1-207ENST00000492462 COPS5Q92905 334 aa13.7□□□□□ -0.22
MDC1-207ENST00000492462 BADQ92934 168 aa13.7□□□□□ -0.22
MDC1-207ENST00000492462 GLT1D1Q96MS3 346 aa13.7□□□□□ -0.22
MDC1-207ENST00000492462 LBHD1Q9BQE6 289 aaPredicted RBP13.7□□□□□ -0.22
MDC1-207ENST00000492462 WDR11Q9BZH6 1224 aa13.7□□□□□ -0.22
MDC1-207ENST00000492462 PRKAG2Q9UGJ0 569 aa13.7□□□□□ -0.22
MDC1-207ENST00000492462 KIAA1217Q5T5P2 1943 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms