RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 DHX32Q7L7V1 743 aaKnown RBP10.84□□□□□ -0.67
BRCA1-219ENST00000491747 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.84□□□□□ -0.67
BRCA1-219ENST00000491747 ACAD9Q9H845 621 aa10.84□□□□□ -0.67
BRCA1-219ENST00000491747 A1CFQ9NQ94 594 aaKnown RBP10.84□□□□□ -0.67
BRCA1-219ENST00000491747 RPTORQ8N122 1335 aa10.84□□□□□ -0.67
BRCA1-219ENST00000491747 CYTH3O43739 400 aa10.83□□□□□ -0.68
BRCA1-219ENST00000491747 GJB1P08034 283 aa10.83□□□□□ -0.68
BRCA1-219ENST00000491747 LIFRP42702 1097 aa10.83□□□□□ -0.68
BRCA1-219ENST00000491747 CNTN2Q02246 1040 aa10.83□□□□□ -0.68
BRCA1-219ENST00000491747 CDC37Q16543 378 aaPredicted RBP10.83□□□□□ -0.68
BRCA1-219ENST00000491747 TKFCQ3LXA3 575 aa10.83□□□□□ -0.68
BRCA1-219ENST00000491747 PRAMEF19Q5SWL8 479 aa10.83□□□□□ -0.68
BRCA1-219ENST00000491747 CATIPQ7Z7H3 387 aa10.83□□□□□ -0.68
BRCA1-219ENST00000491747 ANKRD35Q8N283 1001 aa10.83□□□□□ -0.68
BRCA1-219ENST00000491747 NUP133Q8WUM0 1156 aa10.83□□□□□ -0.68
BRCA1-219ENST00000491747 CLEC4DQ8WXI8 215 aa10.83□□□□□ -0.68
BRCA1-219ENST00000491747 DDX11Q96FC9 970 aa10.83□□□□□ -0.68
BRCA1-219ENST00000491747 JAKMIP1Q96N16 626 aaKnown RBP10.83□□□□□ -0.68
BRCA1-219ENST00000491747 DEFB118Q96PH6 123 aa10.83□□□□□ -0.68
BRCA1-219ENST00000491747 PURBQ96QR8 312 aaKnown RBP10.83□□□□□ -0.68
BRCA1-219ENST00000491747 UPF3BQ9BZI7 483 aaKnown RBP10.83□□□□□ -0.68
BRCA1-219ENST00000491747 HMX1Q9NP08 348 aaPredicted RBP10.83□□□□□ -0.68
BRCA1-219ENST00000491747 FBXO40Q9UH90 709 aa10.83□□□□□ -0.68
BRCA1-219ENST00000491747 NFIBO00712 420 aa10.83□□□□□ -0.68
BRCA1-219ENST00000491747 PPP1R11O60927 126 aaPredicted RBP10.83□□□□□ -0.68
BRCA1-219ENST00000491747 GJA8P48165 433 aa10.83□□□□□ -0.68
BRCA1-219ENST00000491747 KRT32Q14532 448 aa10.83□□□□□ -0.68
BRCA1-219ENST00000491747 QRICH1Q2TAL8 776 aa10.83□□□□□ -0.68
BRCA1-219ENST00000491747 USH1GQ495M9 461 aa10.83□□□□□ -0.68
BRCA1-219ENST00000491747 MTMR8Q96EF0 704 aa10.83□□□□□ -0.68
BRCA1-219ENST00000491747 DIS3Q9Y2L1 958 aaKnown RBP10.83□□□□□ -0.68
BRCA1-219ENST00000491747 ASTN1O14525 1302 aa10.83□□□□□ -0.68
BRCA1-219ENST00000491747 CCDC69A6NI79 296 aa10.82□□□□□ -0.68
BRCA1-219ENST00000491747 LETM1O95202 739 aaPredicted RBP10.82□□□□□ -0.68
BRCA1-219ENST00000491747 SGPL1O95470 568 aa10.82□□□□□ -0.68
BRCA1-219ENST00000491747 MFSD14CQ5VZR4 134 aa10.82□□□□□ -0.68
BRCA1-219ENST00000491747 NFXL1Q6ZNB6 911 aa10.82□□□□□ -0.68
BRCA1-219ENST00000491747 SGMS1Q86VZ5 419 aa10.82□□□□□ -0.68
BRCA1-219ENST00000491747 CCDC144CPQ8IYA2 1237 aa10.82□□□□□ -0.68
BRCA1-219ENST00000491747 TMEM87AQ8NBN3 555 aa10.82□□□□□ -0.68
BRCA1-219ENST00000491747 U2AF1L4Q8WU68 220 aaKnown RBP10.82□□□□□ -0.68
BRCA1-219ENST00000491747 RIOX1Q9H6W3 641 aa10.82□□□□□ -0.68
BRCA1-219ENST00000491747 CYP39A1Q9NYL5 469 aa10.82□□□□□ -0.68
BRCA1-219ENST00000491747 WDR19Q8NEZ3 1342 aa10.82□□□□□ -0.68
BRCA1-219ENST00000491747 MKI67P46013 3256 aaKnown RBP10.82□□□□□ -0.68
BRCA1-219ENST00000491747 LRRC37A2A6NM11 1700 aa10.82□□□□□ -0.68
BRCA1-219ENST00000491747 SOWAHBA6NEL2 793 aa10.82□□□□□ -0.68
BRCA1-219ENST00000491747 DHX16O60231 1041 aaKnown RBP10.82□□□□□ -0.68
BRCA1-219ENST00000491747 DDAH1O94760 285 aa10.82□□□□□ -0.68
BRCA1-219ENST00000491747 CYBAP13498 195 aa10.82□□□□□ -0.68
BRCA1-219ENST00000491747 CMTR1Q8N1G2 835 aaKnown RBP10.82□□□□□ -0.68
BRCA1-219ENST00000491747 TMTC2Q8N394 836 aa10.82□□□□□ -0.68
BRCA1-219ENST00000491747 FAM133AQ8N9E0 248 aa10.82□□□□□ -0.68
BRCA1-219ENST00000491747 TBC1D5Q92609 795 aa10.82□□□□□ -0.68
BRCA1-219ENST00000491747 TINF2Q9BSI4 451 aa10.82□□□□□ -0.68
BRCA1-219ENST00000491747 SLC5A4Q9NY91 659 aa10.82□□□□□ -0.68
BRCA1-219ENST00000491747 PLEKHA8P1O95397 391 aa10.81□□□□□ -0.68
BRCA1-219ENST00000491747 CCDC183Q5T5S1 534 aa10.81□□□□□ -0.68
BRCA1-219ENST00000491747 LHX8Q68G74 356 aa10.81□□□□□ -0.68
BRCA1-219ENST00000491747 NSMFQ6X4W1 530 aa10.81□□□□□ -0.68
BRCA1-219ENST00000491747 PIGSQ96S52 555 aa10.81□□□□□ -0.68
BRCA1-219ENST00000491747 MAP3K14Q99558 947 aa10.81□□□□□ -0.68
BRCA1-219ENST00000491747 CRISPLD2Q9H0B8 497 aa10.81□□□□□ -0.68
BRCA1-219ENST00000491747 SNAI1O95863 264 aaPredicted RBP10.81□□□□□ -0.68
BRCA1-219ENST00000491747 RPS6KB1P23443 525 aa10.81□□□□□ -0.68
BRCA1-219ENST00000491747 BAATQ14032 418 aaPredicted RBP10.81□□□□□ -0.68
BRCA1-219ENST00000491747 BLOC1S2Q6QNY1 142 aa10.81□□□□□ -0.68
BRCA1-219ENST00000491747 SLC30A10Q6XR72 485 aa10.81□□□□□ -0.68
BRCA1-219ENST00000491747 Q6ZUG5 572 aa10.81□□□□□ -0.68
BRCA1-219ENST00000491747 SRBD1Q8N5C6 995 aaKnown RBP10.81□□□□□ -0.68
BRCA1-219ENST00000491747 GDPD2Q9HCC8 539 aa10.81□□□□□ -0.68
BRCA1-219ENST00000491747 ATP6V1DQ9Y5K8 247 aa10.81□□□□□ -0.68
BRCA1-219ENST00000491747 SLC12A7Q9Y666 1083 aa10.81□□□□□ -0.68
BRCA1-219ENST00000491747 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.81□□□□□ -0.68
BRCA1-219ENST00000491747 POTEB2H3BUK9 544 aa10.8□□□□□ -0.68
BRCA1-219ENST00000491747 OPLAHO14841 1288 aa10.8□□□□□ -0.68
BRCA1-219ENST00000491747 HMGB1P09429 215 aaKnown RBP10.8□□□□□ -0.68
BRCA1-219ENST00000491747 CASTP20810 708 aaKnown RBP10.8□□□□□ -0.68
BRCA1-219ENST00000491747 MNX1P50219 401 aaPredicted RBP10.8□□□□□ -0.68
BRCA1-219ENST00000491747 FOXD4L6Q3SYB3 417 aaPredicted RBP10.8□□□□□ -0.68
BRCA1-219ENST00000491747 DNTTIP2Q5QJE6 756 aaKnown RBP10.8□□□□□ -0.68
BRCA1-219ENST00000491747 APOA5Q6Q788 366 aa10.8□□□□□ -0.68
BRCA1-219ENST00000491747 MAMDC4Q6UXC1 1216 aa10.8□□□□□ -0.68
BRCA1-219ENST00000491747 FOXD4L3Q6VB84 417 aaPredicted RBP10.8□□□□□ -0.68
BRCA1-219ENST00000491747 FBXO11Q86XK2 927 aa10.8□□□□□ -0.68
BRCA1-219ENST00000491747 HOMER1Q86YM7 354 aa10.8□□□□□ -0.68
BRCA1-219ENST00000491747 PIBF1Q8WXW3 757 aa10.8□□□□□ -0.68
BRCA1-219ENST00000491747 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.8□□□□□ -0.68
BRCA1-219ENST00000491747 PFASO15067 1338 aa10.8□□□□□ -0.68
BRCA1-219ENST00000491747 ZBTB5O15062 677 aa10.8□□□□□ -0.68
BRCA1-219ENST00000491747 GADD45BO75293 160 aaPredicted RBP10.8□□□□□ -0.68
BRCA1-219ENST00000491747 TFRCP02786 760 aaKnown RBP10.8□□□□□ -0.68
BRCA1-219ENST00000491747 ZNF865P0CJ78 1059 aaPredicted RBP10.8□□□□□ -0.68
BRCA1-219ENST00000491747 CNGA1P29973 690 aa10.8□□□□□ -0.68
BRCA1-219ENST00000491747 APOBRQ0VD83 1088 aa10.8□□□□□ -0.68
BRCA1-219ENST00000491747 ANO1Q5XXA6 986 aa10.8□□□□□ -0.68
BRCA1-219ENST00000491747 ZNF467Q7Z7K2 595 aaPredicted RBP10.8□□□□□ -0.68
BRCA1-219ENST00000491747 MICU3Q86XE3 530 aa10.8□□□□□ -0.68
BRCA1-219ENST00000491747 FANCBQ8NB91 859 aa10.8□□□□□ -0.68
BRCA1-219ENST00000491747 CTCFLQ8NI51 663 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms