RNA–Protein interactions for RNA: ENST00000491366.5

SEC22A-209, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 482 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-209ENST00000491366 CCL5P13501 91 aa22.59■■□□□ 1.21
SEC22A-209ENST00000491366 AKAP17AQ02040 695 aaKnown RBP22.59■■□□□ 1.21
SEC22A-209ENST00000491366 SCRN1Q12765 414 aa22.59■■□□□ 1.21
SEC22A-209ENST00000491366 NTRK3Q16288 839 aa22.59■■□□□ 1.21
SEC22A-209ENST00000491366 ME3Q16798 604 aa22.59■■□□□ 1.21
SEC22A-209ENST00000491366 NECAB1Q8N987 351 aa22.59■■□□□ 1.21
SEC22A-209ENST00000491366 RGS22Q8NE09 1264 aa22.59■■□□□ 1.21
SEC22A-209ENST00000491366 TINF2Q9BSI4 451 aa22.59■■□□□ 1.21
SEC22A-209ENST00000491366 PLXNA1Q9UIW2 1896 aa22.59■■□□□ 1.21
SEC22A-209ENST00000491366 IFNAR1P17181 557 aa22.58■■□□□ 1.21
SEC22A-209ENST00000491366 HOXA13P31271 388 aaPredicted RBP22.58■■□□□ 1.21
SEC22A-209ENST00000491366 WWC2Q6AWC2 1192 aa22.58■■□□□ 1.21
SEC22A-209ENST00000491366 RNF208Q9H0X6 261 aa22.58■■□□□ 1.21
SEC22A-209ENST00000491366 DDX49Q9Y6V7 483 aaKnown RBP22.58■■□□□ 1.21
SEC22A-209ENST00000491366 RBBP6Q7Z6E9 1792 aaKnown RBP22.58■■□□□ 1.2
SEC22A-209ENST00000491366 PRPF3O43395 683 aaKnown RBP22.57■■□□□ 1.2
SEC22A-209ENST00000491366 PRAMEF19Q5SWL8 479 aa22.57■■□□□ 1.2
SEC22A-209ENST00000491366 CPLX2Q6PUV4 134 aaKnown RBP22.57■■□□□ 1.2
SEC22A-209ENST00000491366 ZNF467Q7Z7K2 595 aaPredicted RBP22.57■■□□□ 1.2
SEC22A-209ENST00000491366 SYTL5Q8TDW5 730 aaPredicted RBP22.57■■□□□ 1.2
SEC22A-209ENST00000491366 ADD3Q9UEY8 706 aaKnown RBP22.57■■□□□ 1.2
SEC22A-209ENST00000491366 ASTN1O14525 1302 aa22.57■■□□□ 1.2
SEC22A-209ENST00000491366 GCOM1H8Y6P7 765 aaPredicted RBP22.56■■□□□ 1.2
SEC22A-209ENST00000491366 DTNBO60941 627 aa22.56■■□□□ 1.2
SEC22A-209ENST00000491366 CAPN15O75808 1086 aa22.56■■□□□ 1.2
SEC22A-209ENST00000491366 IGHA2P01877 340 aa22.56■■□□□ 1.2
SEC22A-209ENST00000491366 POLR2MP0CAP2 368 aa22.56■■□□□ 1.2
SEC22A-209ENST00000491366 CCND3P30281 292 aaPredicted RBP22.56■■□□□ 1.2
SEC22A-209ENST00000491366 NAPAP54920 295 aa22.56■■□□□ 1.2
SEC22A-209ENST00000491366 SSRP1Q08945 709 aaKnown RBP22.56■■□□□ 1.2
SEC22A-209ENST00000491366 MAP3K21Q5TCX8 1036 aa22.56■■□□□ 1.2
SEC22A-209ENST00000491366 ARMCX2Q7L311 632 aa22.56■■□□□ 1.2
SEC22A-209ENST00000491366 TRIM22Q8IYM9 498 aa22.56■■□□□ 1.2
SEC22A-209ENST00000491366 TMEM106CQ9BVX2 250 aa22.56■■□□□ 1.2
SEC22A-209ENST00000491366 HMX1Q9NP08 348 aaPredicted RBP22.56■■□□□ 1.2
SEC22A-209ENST00000491366 COL20A1Q9P218 1284 aa22.56■■□□□ 1.2
SEC22A-209ENST00000491366 LIMCH1Q9UPQ0 1083 aa22.56■■□□□ 1.2
SEC22A-209ENST00000491366 RPTORQ8N122 1335 aa22.56■■□□□ 1.2
SEC22A-209ENST00000491366 ST18O60284 1047 aa22.55■■□□□ 1.2
SEC22A-209ENST00000491366 SCG2P13521 617 aa22.55■■□□□ 1.2
SEC22A-209ENST00000491366 CNGA1P29973 690 aa22.55■■□□□ 1.2
SEC22A-209ENST00000491366 ALDH5A1P51649 535 aaPredicted RBP22.55■■□□□ 1.2
SEC22A-209ENST00000491366 HSD17B4P51659 736 aa22.55■■□□□ 1.2
SEC22A-209ENST00000491366 SOX10P56693 466 aa22.55■■□□□ 1.2
SEC22A-209ENST00000491366 PFKFB3Q16875 520 aaPredicted RBP22.55■■□□□ 1.2
SEC22A-209ENST00000491366 MAMDC4Q6UXC1 1216 aa22.55■■□□□ 1.2
SEC22A-209ENST00000491366 MSL3Q8N5Y2 521 aaKnown RBP22.55■■□□□ 1.2
SEC22A-209ENST00000491366 TRPV1Q8NER1 839 aa22.55■■□□□ 1.2
SEC22A-209ENST00000491366 GTF3C6Q969F1 213 aa22.55■■□□□ 1.2
SEC22A-209ENST00000491366 TAAR1Q96RJ0 339 aa22.55■■□□□ 1.2
SEC22A-209ENST00000491366 RNF26Q9BY78 433 aaPredicted RBP22.55■■□□□ 1.2
SEC22A-209ENST00000491366 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.55■■□□□ 1.2
SEC22A-209ENST00000491366 RBM27Q9P2N5 1060 aaKnown RBP22.55■■□□□ 1.2
SEC22A-209ENST00000491366 CNPY2Q9Y2B0 182 aa22.55■■□□□ 1.2
SEC22A-209ENST00000491366 LCTP09848 1927 aa22.55■■□□□ 1.2
SEC22A-209ENST00000491366 SYNGAP1Q96PV0 1343 aa22.55■■□□□ 1.2
SEC22A-209ENST00000491366 ASB14A6NK59 587 aa22.54■■□□□ 1.2
SEC22A-209ENST00000491366 STXBP3O00186 592 aa22.54■■□□□ 1.2
SEC22A-209ENST00000491366 CDKL5O76039 1030 aa22.54■■□□□ 1.2
SEC22A-209ENST00000491366 SNAI1O95863 264 aaPredicted RBP22.54■■□□□ 1.2
SEC22A-209ENST00000491366 CYBAP13498 195 aa22.54■■□□□ 1.2
SEC22A-209ENST00000491366 PKN1Q16512 942 aa22.54■■□□□ 1.2
SEC22A-209ENST00000491366 FCHSD1Q86WN1 690 aa22.54■■□□□ 1.2
SEC22A-209ENST00000491366 CUL5Q93034 780 aa22.54■■□□□ 1.2
SEC22A-209ENST00000491366 MAF1Q9H063 256 aa22.54■■□□□ 1.2
SEC22A-209ENST00000491366 PSTPIP2Q9H939 334 aa22.54■■□□□ 1.2
SEC22A-209ENST00000491366 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.54■■□□□ 1.2
SEC22A-209ENST00000491366 TYW1BQ6NUM6 668 aa22.53■■□□□ 1.2
SEC22A-209ENST00000491366 USP17L6PQ6QN14 398 aa22.53■■□□□ 1.2
SEC22A-209ENST00000491366 SMARCC2Q8TAQ2 1214 aa22.53■■□□□ 1.2
SEC22A-209ENST00000491366 DEFB118Q96PH6 123 aa22.53■■□□□ 1.2
SEC22A-209ENST00000491366 RMDN3Q96TC7 470 aa22.53■■□□□ 1.2
SEC22A-209ENST00000491366 BARHL2Q9NY43 387 aa22.53■■□□□ 1.2
SEC22A-209ENST00000491366 ZHX1Q9UKY1 873 aaPredicted RBP22.53■■□□□ 1.2
SEC22A-209ENST00000491366 hCG_1984214I3L0E3 225 aa22.52■■□□□ 1.2
SEC22A-209ENST00000491366 GHRHRQ02643 423 aa22.52■■□□□ 1.2
SEC22A-209ENST00000491366 ARHGEF16Q5VV41 709 aa22.52■■□□□ 1.2
SEC22A-209ENST00000491366 PPP1R18Q6NYC8 613 aa22.52■■□□□ 1.2
SEC22A-209ENST00000491366 EEPD1Q7L9B9 569 aa22.52■■□□□ 1.2
SEC22A-209ENST00000491366 ZNF713Q8N859 430 aaPredicted RBP22.52■■□□□ 1.2
SEC22A-209ENST00000491366 DNERQ8NFT8 737 aa22.52■■□□□ 1.2
SEC22A-209ENST00000491366 MAP3K20Q9NYL2 800 aaKnown RBP22.52■■□□□ 1.2
SEC22A-209ENST00000491366 POTEFA5A3E0 1075 aa22.51■■□□□ 1.19
SEC22A-209ENST00000491366 CTDNEP1O95476 244 aa22.51■■□□□ 1.19
SEC22A-209ENST00000491366 EIF2AK2P19525 551 aaKnown RBP22.51■■□□□ 1.19
SEC22A-209ENST00000491366 PDE4DQ08499 809 aa22.51■■□□□ 1.19
SEC22A-209ENST00000491366 UBE2SQ16763 222 aa22.51■■□□□ 1.19
SEC22A-209ENST00000491366 SAMD3Q8N6K7 520 aa22.51■■□□□ 1.19
SEC22A-209ENST00000491366 NSUN6Q8TEA1 469 aaKnown RBP22.51■■□□□ 1.19
SEC22A-209ENST00000491366 ZSCAN31Q96LW9 406 aaPredicted RBP22.51■■□□□ 1.19
SEC22A-209ENST00000491366 MPHOSPH6Q99547 160 aaKnown RBP22.51■■□□□ 1.19
SEC22A-209ENST00000491366 PAK6Q9NQU5 681 aaPredicted RBP22.51■■□□□ 1.19
SEC22A-209ENST00000491366 SMCO2A6NFE2 343 aa22.5■■□□□ 1.19
SEC22A-209ENST00000491366 CD2BP2O95400 341 aaKnown RBP22.5■■□□□ 1.19
SEC22A-209ENST00000491366 DEXIO95424 95 aa22.5■■□□□ 1.19
SEC22A-209ENST00000491366 ADCY7P51828 1080 aa22.5■■□□□ 1.19
SEC22A-209ENST00000491366 ST3GAL1Q11201 340 aa22.5■■□□□ 1.19
SEC22A-209ENST00000491366 ACVR2BQ13705 512 aa22.5■■□□□ 1.19
SEC22A-209ENST00000491366 CCDC83Q8IWF9 413 aa22.5■■□□□ 1.19
SEC22A-209ENST00000491366 FBXO16Q8IX29 292 aaPredicted RBP22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms