RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 FPGSQ05932 587 aa19.28■□□□□ 0.68
PDLIM2-217ENST00000491330 DUSP28Q4G0W2 176 aa19.28■□□□□ 0.68
PDLIM2-217ENST00000491330 ERICH6BQ5W0A0 696 aa19.28■□□□□ 0.68
PDLIM2-217ENST00000491330 TMTC2Q8N394 836 aa19.28■□□□□ 0.68
PDLIM2-217ENST00000491330 MORC4Q8TE76 937 aa19.28■□□□□ 0.68
PDLIM2-217ENST00000491330 NSUN6Q8TEA1 469 aaKnown RBP19.28■□□□□ 0.68
PDLIM2-217ENST00000491330 SCFD2Q8WU76 684 aa19.28■□□□□ 0.68
PDLIM2-217ENST00000491330 ZNFX1Q9P2E3 1918 aaKnown RBP19.27■□□□□ 0.68
PDLIM2-217ENST00000491330 TRIOBPQ9H2D6 2365 aa19.27■□□□□ 0.68
PDLIM2-217ENST00000491330 KLRF2D3W0D1 207 aa19.27■□□□□ 0.68
PDLIM2-217ENST00000491330 KIAA0355O15063 1070 aa19.27■□□□□ 0.68
PDLIM2-217ENST00000491330 KPNA6O60684 536 aa19.27■□□□□ 0.68
PDLIM2-217ENST00000491330 NKX3-2P78367 333 aa19.27■□□□□ 0.68
PDLIM2-217ENST00000491330 TTLL4Q14679 1199 aa19.27■□□□□ 0.68
PDLIM2-217ENST00000491330 PPP2R5BQ15173 497 aa19.27■□□□□ 0.68
PDLIM2-217ENST00000491330 CCSAPQ6IQ19 270 aaPredicted RBP19.27■□□□□ 0.68
PDLIM2-217ENST00000491330 TMEM199Q8N511 208 aa19.27■□□□□ 0.68
PDLIM2-217ENST00000491330 SAMD3Q8N6K7 520 aa19.27■□□□□ 0.68
PDLIM2-217ENST00000491330 CLEC4DQ8WXI8 215 aa19.27■□□□□ 0.68
PDLIM2-217ENST00000491330 KATNBL1Q9H079 304 aa19.27■□□□□ 0.68
PDLIM2-217ENST00000491330 MAP3K20Q9NYL2 800 aaKnown RBP19.27■□□□□ 0.68
PDLIM2-217ENST00000491330 GNEQ9Y223 722 aaKnown RBP19.27■□□□□ 0.68
PDLIM2-217ENST00000491330 CYP21A2P08686 494 aa19.26■□□□□ 0.67
PDLIM2-217ENST00000491330 SMPD1P17405 629 aa19.26■□□□□ 0.67
PDLIM2-217ENST00000491330 BEX3Q00994 111 aa19.26■□□□□ 0.67
PDLIM2-217ENST00000491330 STXBP2Q15833 593 aa19.26■□□□□ 0.67
PDLIM2-217ENST00000491330 TMEM67Q5HYA8 995 aa19.26■□□□□ 0.67
PDLIM2-217ENST00000491330 RNF20Q5VTR2 975 aa19.26■□□□□ 0.67
PDLIM2-217ENST00000491330 SLC30A10Q6XR72 485 aa19.26■□□□□ 0.67
PDLIM2-217ENST00000491330 DEFB123Q8N688 67 aa19.26■□□□□ 0.67
PDLIM2-217ENST00000491330 LRCH3Q96II8 777 aa19.26■□□□□ 0.67
PDLIM2-217ENST00000491330 IWS1Q96ST2 819 aa19.26■□□□□ 0.67
PDLIM2-217ENST00000491330 PLXNA1Q9UIW2 1896 aa19.25■□□□□ 0.67
PDLIM2-217ENST00000491330 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.25■□□□□ 0.67
PDLIM2-217ENST00000491330 TRIM43BA6NCK2 446 aa19.25■□□□□ 0.67
PDLIM2-217ENST00000491330 E7EWF7 191 aa19.25■□□□□ 0.67
PDLIM2-217ENST00000491330 TIMP1P01033 207 aa19.25■□□□□ 0.67
PDLIM2-217ENST00000491330 SUPT20HL2P0C7V6 817 aa19.25■□□□□ 0.67
PDLIM2-217ENST00000491330 KIF5BP33176 963 aa19.25■□□□□ 0.67
PDLIM2-217ENST00000491330 PPIGQ13427 754 aaKnown RBP eCLIP19.25■□□□□ 0.67
PDLIM2-217ENST00000491330 ITGA7Q13683 1181 aa19.25■□□□□ 0.67
PDLIM2-217ENST00000491330 QRICH1Q2TAL8 776 aa19.25■□□□□ 0.67
PDLIM2-217ENST00000491330 ARHGEF16Q5VV41 709 aa19.25■□□□□ 0.67
PDLIM2-217ENST00000491330 TAPT1Q6NXT6 567 aa19.25■□□□□ 0.67
PDLIM2-217ENST00000491330 CXCL17Q6UXB2 119 aa19.25■□□□□ 0.67
PDLIM2-217ENST00000491330 OR6J1Q8NGC5 347 aa19.25■□□□□ 0.67
PDLIM2-217ENST00000491330 CTCFLQ8NI51 663 aaPredicted RBP19.25■□□□□ 0.67
PDLIM2-217ENST00000491330 MAP4K1Q92918 833 aa19.25■□□□□ 0.67
PDLIM2-217ENST00000491330 TRIM43Q96BQ3 446 aaPredicted RBP19.25■□□□□ 0.67
PDLIM2-217ENST00000491330 MTA3Q9BTC8 594 aa19.25■□□□□ 0.67
PDLIM2-217ENST00000491330 MTIF3Q9H2K0 278 aaKnown RBP19.25■□□□□ 0.67
PDLIM2-217ENST00000491330 PDGFCQ9NRA1 345 aa19.25■□□□□ 0.67
PDLIM2-217ENST00000491330 MYADML2A6NDP7 307 aa19.24■□□□□ 0.67
PDLIM2-217ENST00000491330 ZBTB5O15062 677 aa19.24■□□□□ 0.67
PDLIM2-217ENST00000491330 CENPBP07199 599 aaPredicted RBP19.24■□□□□ 0.67
PDLIM2-217ENST00000491330 TXNP10599 105 aaKnown RBP19.24■□□□□ 0.67
PDLIM2-217ENST00000491330 PTH1RQ03431 593 aa19.24■□□□□ 0.67
PDLIM2-217ENST00000491330 FAAP100Q0VG06 881 aa19.24■□□□□ 0.67
PDLIM2-217ENST00000491330 BMP2KLQ5H9B9 411 aa19.24■□□□□ 0.67
PDLIM2-217ENST00000491330 NFXL1Q6ZNB6 911 aa19.24■□□□□ 0.67
PDLIM2-217ENST00000491330 JMJD4Q9H9V9 463 aa19.24■□□□□ 0.67
PDLIM2-217ENST00000491330 PCDHA1Q9Y5I3 950 aa19.24■□□□□ 0.67
PDLIM2-217ENST00000491330 SOX1O00570 391 aaPredicted RBP19.23■□□□□ 0.67
PDLIM2-217ENST00000491330 CFBP00751 764 aa19.23■□□□□ 0.67
PDLIM2-217ENST00000491330 GNAQP50148 359 aa19.23■□□□□ 0.67
PDLIM2-217ENST00000491330 CDK7P50613 346 aa19.23■□□□□ 0.67
PDLIM2-217ENST00000491330 SEC23AQ15436 765 aa19.23■□□□□ 0.67
PDLIM2-217ENST00000491330 SH3RF1Q7Z6J0 888 aa19.23■□□□□ 0.67
PDLIM2-217ENST00000491330 CCDC136Q96JN2 1154 aa19.23■□□□□ 0.67
PDLIM2-217ENST00000491330 RNPC3Q96LT9 517 aaKnown RBP19.23■□□□□ 0.67
PDLIM2-217ENST00000491330 RMDN3Q96TC7 470 aa19.23■□□□□ 0.67
PDLIM2-217ENST00000491330 RBM8AQ9Y5S9 174 aaKnown RBP19.23■□□□□ 0.67
PDLIM2-217ENST00000491330 FRMPD3Q5JV73 1810 aa19.23■□□□□ 0.67
PDLIM2-217ENST00000491330 RBM47A0AV96 593 aaKnown RBP19.22■□□□□ 0.67
PDLIM2-217ENST00000491330 CCDC69A6NI79 296 aa19.22■□□□□ 0.67
PDLIM2-217ENST00000491330 MCM5P33992 734 aa19.22■□□□□ 0.67
PDLIM2-217ENST00000491330 SHHQ15465 462 aa19.22■□□□□ 0.67
PDLIM2-217ENST00000491330 ZNF697Q5TEC3 545 aa19.22■□□□□ 0.67
PDLIM2-217ENST00000491330 MFSD5Q6N075 450 aa19.22■□□□□ 0.67
PDLIM2-217ENST00000491330 SYNE3Q6ZMZ3 975 aa19.22■□□□□ 0.67
PDLIM2-217ENST00000491330 CYB5R4Q7L1T6 521 aa19.22■□□□□ 0.67
PDLIM2-217ENST00000491330 PURBQ96QR8 312 aaKnown RBP19.22■□□□□ 0.67
PDLIM2-217ENST00000491330 LZTS2Q9BRK4 669 aa19.22■□□□□ 0.67
PDLIM2-217ENST00000491330 MTG1Q9BT17 334 aaPredicted RBP19.22■□□□□ 0.67
PDLIM2-217ENST00000491330 CPVLQ9H3G5 476 aa19.22■□□□□ 0.67
PDLIM2-217ENST00000491330 PALM3A6NDB9 673 aaPredicted RBP19.21■□□□□ 0.67
PDLIM2-217ENST00000491330 ADCY6O43306 1168 aa19.21■□□□□ 0.67
PDLIM2-217ENST00000491330 EIF3JO75822 258 aaKnown RBP19.21■□□□□ 0.67
PDLIM2-217ENST00000491330 MYL3P08590 195 aa19.21■□□□□ 0.67
PDLIM2-217ENST00000491330 CALM1P0DP23 149 aa19.21■□□□□ 0.67
PDLIM2-217ENST00000491330 CALM2P0DP24 149 aa19.21■□□□□ 0.67
PDLIM2-217ENST00000491330 CALM3P0DP25 149 aa19.21■□□□□ 0.67
PDLIM2-217ENST00000491330 FAM109BQ6ICB4 259 aaPredicted RBP19.21■□□□□ 0.67
PDLIM2-217ENST00000491330 KCNV1Q6PIU1 500 aa19.21■□□□□ 0.67
PDLIM2-217ENST00000491330 HOMER1Q86YM7 354 aa19.21■□□□□ 0.67
PDLIM2-217ENST00000491330 SYTL5Q8TDW5 730 aaPredicted RBP19.21■□□□□ 0.67
PDLIM2-217ENST00000491330 TMEM87BQ96K49 555 aa19.21■□□□□ 0.67
PDLIM2-217ENST00000491330 ANO2Q9NQ90 1003 aa19.21■□□□□ 0.67
PDLIM2-217ENST00000491330 SEC63Q9UGP8 760 aaKnown RBP19.21■□□□□ 0.67
PDLIM2-217ENST00000491330 ALPK3Q96L96 1907 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms