RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 ANO3Q9BYT9 981 aa15.81■□□□□ 0.12
SMPD4-219ENST00000491128 RANBP17Q9H2T7 1088 aaKnown RBP15.81■□□□□ 0.12
SMPD4-219ENST00000491128 PPP1R18Q6NYC8 613 aa15.8■□□□□ 0.12
SMPD4-219ENST00000491128 FERMT2Q96AC1 680 aa15.8■□□□□ 0.12
SMPD4-219ENST00000491128 ATG4CQ96DT6 458 aa15.8■□□□□ 0.12
SMPD4-219ENST00000491128 KIAA1468Q9P260 1216 aa15.8■□□□□ 0.12
SMPD4-219ENST00000491128 CCPG1Q9ULG6 757 aa15.8■□□□□ 0.12
SMPD4-219ENST00000491128 ZNF536O15090 1300 aa15.8■□□□□ 0.12
SMPD4-219ENST00000491128 NFIBO00712 420 aa15.8■□□□□ 0.12
SMPD4-219ENST00000491128 ALAS1P13196 640 aa15.8■□□□□ 0.12
SMPD4-219ENST00000491128 OTUD5Q96G74 571 aa15.8■□□□□ 0.12
SMPD4-219ENST00000491128 SYNPO2Q9UMS6 1093 aa15.8■□□□□ 0.12
SMPD4-219ENST00000491128 WDR46O15213 610 aaKnown RBP15.79■□□□□ 0.12
SMPD4-219ENST00000491128 PPP1R12BO60237 982 aaPredicted RBP15.79■□□□□ 0.12
SMPD4-219ENST00000491128 USP50Q70EL3 339 aaPredicted RBP15.79■□□□□ 0.12
SMPD4-219ENST00000491128 ZNF579Q8NAF0 562 aaKnown RBP15.79■□□□□ 0.12
SMPD4-219ENST00000491128 PRPF38AQ8NAV1 312 aaKnown RBP15.79■□□□□ 0.12
SMPD4-219ENST00000491128 PURBQ96QR8 312 aaKnown RBP15.79■□□□□ 0.12
SMPD4-219ENST00000491128 PPP2R3BQ9Y5P8 575 aa15.79■□□□□ 0.12
SMPD4-219ENST00000491128 PITPNM2Q9BZ72 1349 aa15.79■□□□□ 0.12
SMPD4-219ENST00000491128 BMP15O95972 392 aa15.79■□□□□ 0.12
SMPD4-219ENST00000491128 OR52Z1P0C646 297 aa15.79■□□□□ 0.12
SMPD4-219ENST00000491128 MAP3K9P80192 1104 aa15.79■□□□□ 0.12
SMPD4-219ENST00000491128 FAM160B2Q86V87 743 aa15.79■□□□□ 0.12
SMPD4-219ENST00000491128 RASSF8Q8NHQ8 419 aa15.79■□□□□ 0.12
SMPD4-219ENST00000491128 POTEMA6NI47 508 aa15.78■□□□□ 0.12
SMPD4-219ENST00000491128 SPDYE3A6NKU9 549 aa15.78■□□□□ 0.12
SMPD4-219ENST00000491128 ACTN4O43707 911 aaKnown RBP15.78■□□□□ 0.12
SMPD4-219ENST00000491128 CALCRLQ16602 461 aa15.78■□□□□ 0.12
SMPD4-219ENST00000491128 DPCR1Q3MIW9 517 aa15.78■□□□□ 0.12
SMPD4-219ENST00000491128 MUM1L1Q5H9M0 696 aa15.78■□□□□ 0.12
SMPD4-219ENST00000491128 TREML2Q5T2D2 321 aa15.78■□□□□ 0.12
SMPD4-219ENST00000491128 LPAR1Q92633 364 aa15.78■□□□□ 0.12
SMPD4-219ENST00000491128 RRAGCQ9HB90 399 aa15.78■□□□□ 0.12
SMPD4-219ENST00000491128 DDX25Q9UHL0 483 aaKnown RBP15.78■□□□□ 0.12
SMPD4-219ENST00000491128 AFG3L2Q9Y4W6 797 aa15.78■□□□□ 0.12
SMPD4-219ENST00000491128 RIPK3Q9Y572 518 aa15.78■□□□□ 0.12
SMPD4-219ENST00000491128 FAM237AA0A1B0GTK4 181 aa15.78■□□□□ 0.12
SMPD4-219ENST00000491128 IRF6O14896 467 aa15.78■□□□□ 0.12
SMPD4-219ENST00000491128 LRRC15Q8TF66 581 aa15.78■□□□□ 0.12
SMPD4-219ENST00000491128 WDR18Q9BV38 432 aa15.78■□□□□ 0.12
SMPD4-219ENST00000491128 BLZF1Q9H2G9 400 aa15.78■□□□□ 0.12
SMPD4-219ENST00000491128 AS3MTQ9HBK9 375 aa15.78■□□□□ 0.12
SMPD4-219ENST00000491128 CBX8Q9HC52 389 aa15.78■□□□□ 0.12
SMPD4-219ENST00000491128 USP25Q9UHP3 1055 aa15.78■□□□□ 0.12
SMPD4-219ENST00000491128 PCDHA5Q9Y5H7 936 aa15.78■□□□□ 0.12
SMPD4-219ENST00000491128 ATAD5Q96QE3 1844 aa15.77■□□□□ 0.12
SMPD4-219ENST00000491128 ARHGAP4P98171 946 aa15.77■□□□□ 0.12
SMPD4-219ENST00000491128 MKRN3Q13064 507 aaKnown RBP15.77■□□□□ 0.12
SMPD4-219ENST00000491128 PRR16Q569H4 304 aa15.77■□□□□ 0.12
SMPD4-219ENST00000491128 CSADQ9Y600 493 aa15.77■□□□□ 0.12
SMPD4-219ENST00000491128 FAM86B1E9PN63 330 aa15.77■□□□□ 0.11
SMPD4-219ENST00000491128 CTAGE5O15320 804 aa15.77■□□□□ 0.11
SMPD4-219ENST00000491128 AP5Z1O43299 807 aa15.77■□□□□ 0.11
SMPD4-219ENST00000491128 FAM86B2P0C5J1 330 aa15.77■□□□□ 0.11
SMPD4-219ENST00000491128 ZNF165P49910 485 aa15.77■□□□□ 0.11
SMPD4-219ENST00000491128 PPP1R9AQ9ULJ8 1098 aa15.77■□□□□ 0.11
SMPD4-219ENST00000491128 MARCH6O60337 910 aa15.76■□□□□ 0.11
SMPD4-219ENST00000491128 USP14P54578 494 aa15.76■□□□□ 0.11
SMPD4-219ENST00000491128 MDM2Q00987 491 aaPredicted RBP15.76■□□□□ 0.11
SMPD4-219ENST00000491128 DHX8Q14562 1220 aaKnown RBP15.76■□□□□ 0.11
SMPD4-219ENST00000491128 ARL6IP4Q66PJ3 421 aaKnown RBP15.76■□□□□ 0.11
SMPD4-219ENST00000491128 HAS1Q92839 578 aa15.76■□□□□ 0.11
SMPD4-219ENST00000491128 NUDT12Q9BQG2 462 aa15.76■□□□□ 0.11
SMPD4-219ENST00000491128 CTDP1Q9Y5B0 961 aaPredicted RBP15.76■□□□□ 0.11
SMPD4-219ENST00000491128 PLS1Q14651 629 aa15.76■□□□□ 0.11
SMPD4-219ENST00000491128 MTMR9Q96QG7 549 aa15.76■□□□□ 0.11
SMPD4-219ENST00000491128 MTRQ99707 1265 aa15.76■□□□□ 0.11
SMPD4-219ENST00000491128 TTC12Q9H892 705 aaPredicted RBP15.76■□□□□ 0.11
SMPD4-219ENST00000491128 SLC38A10Q9HBR0 1119 aa15.76■□□□□ 0.11
SMPD4-219ENST00000491128 COL20A1Q9P218 1284 aa15.76■□□□□ 0.11
SMPD4-219ENST00000491128 VWA5AO00534 786 aa15.75■□□□□ 0.11
SMPD4-219ENST00000491128 ICAM1P05362 532 aa15.75■□□□□ 0.11
SMPD4-219ENST00000491128 STAT3P40763 770 aa15.75■□□□□ 0.11
SMPD4-219ENST00000491128 UBA7P41226 1012 aa15.75■□□□□ 0.11
SMPD4-219ENST00000491128 POSTNQ15063 836 aa15.75■□□□□ 0.11
SMPD4-219ENST00000491128 FAM177A1Q8N128 213 aaPredicted RBP15.75■□□□□ 0.11
SMPD4-219ENST00000491128 GCOM1H8Y6P7 765 aaPredicted RBP15.75■□□□□ 0.11
SMPD4-219ENST00000491128 POLR2MP0CAP2 368 aa15.75■□□□□ 0.11
SMPD4-219ENST00000491128 BMP6P22004 513 aa15.75■□□□□ 0.11
SMPD4-219ENST00000491128 LONP1P36776 959 aaKnown RBP15.75■□□□□ 0.11
SMPD4-219ENST00000491128 GADL1Q6ZQY3 521 aa15.75■□□□□ 0.11
SMPD4-219ENST00000491128 PAGE5Q96GU1 130 aa15.75■□□□□ 0.11
SMPD4-219ENST00000491128 TMOD4Q9NZQ9 345 aa15.75■□□□□ 0.11
SMPD4-219ENST00000491128 CENPFP49454 3210 aa15.74■□□□□ 0.11
SMPD4-219ENST00000491128 IREB2P48200 963 aaKnown RBP15.74■□□□□ 0.11
SMPD4-219ENST00000491128 TIGD1Q96MW7 591 aa15.74■□□□□ 0.11
SMPD4-219ENST00000491128 IQCA1LA6NCM1 817 aa15.74■□□□□ 0.11
SMPD4-219ENST00000491128 PLA2G6O60733 806 aa15.74■□□□□ 0.11
SMPD4-219ENST00000491128 E2F4Q16254 413 aa15.74■□□□□ 0.11
SMPD4-219ENST00000491128 STX1AQ16623 288 aa15.74■□□□□ 0.11
SMPD4-219ENST00000491128 NSMFQ6X4W1 530 aa15.74■□□□□ 0.11
SMPD4-219ENST00000491128 SMYD4Q8IYR2 804 aaPredicted RBP15.74■□□□□ 0.11
SMPD4-219ENST00000491128 CEP57L1Q8IYX8 460 aa15.74■□□□□ 0.11
SMPD4-219ENST00000491128 FAM200AQ8TCP9 573 aa15.74■□□□□ 0.11
SMPD4-219ENST00000491128 CLEC4DQ8WXI8 215 aa15.74■□□□□ 0.11
SMPD4-219ENST00000491128 MRPL11Q9Y3B7 192 aaKnown RBP15.74■□□□□ 0.11
SMPD4-219ENST00000491128 COBLO75128 1261 aa15.73■□□□□ 0.11
SMPD4-219ENST00000491128 NF2P35240 595 aa15.73■□□□□ 0.11
SMPD4-219ENST00000491128 ZNF76P36508 570 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms