RNA–Protein interactions for RNA: ENST00000490692.1

PCSK9-202, Transcript of proprotein convertase subtilisin/kexin type 9, humanhuman

TSL 2

Gene PCSK9, Length 3,891 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9-202ENST00000490692 TBC1D7Q9P0N9 293 aa12.68□□□□□ -0.38
PCSK9-202ENST00000490692 ZSWIM5Q9P217 1185 aa12.68□□□□□ -0.38
PCSK9-202ENST00000490692 UBN2Q6ZU65 1347 aa12.68□□□□□ -0.38
PCSK9-202ENST00000490692 NPHP4O75161 1426 aaPredicted RBP12.68□□□□□ -0.38
PCSK9-202ENST00000490692 HMGB1P1B2RPK0 211 aaPredicted RBP12.68□□□□□ -0.38
PCSK9-202ENST00000490692 H0Y3Z8 333 aa12.68□□□□□ -0.38
PCSK9-202ENST00000490692 SH2B2O14492 632 aaPredicted RBP12.68□□□□□ -0.38
PCSK9-202ENST00000490692 GTPBP6O43824 516 aaPredicted RBP12.68□□□□□ -0.38
PCSK9-202ENST00000490692 KLK7P49862 253 aa12.68□□□□□ -0.38
PCSK9-202ENST00000490692 LLGL1Q15334 1064 aa12.68□□□□□ -0.38
PCSK9-202ENST00000490692 TMTC2Q8N394 836 aa12.68□□□□□ -0.38
PCSK9-202ENST00000490692 FANCBQ8NB91 859 aa12.68□□□□□ -0.38
PCSK9-202ENST00000490692 TSEN2Q8NCE0 465 aaKnown RBP12.68□□□□□ -0.38
PCSK9-202ENST00000490692 MRRFQ96E11 262 aaKnown RBP12.68□□□□□ -0.38
PCSK9-202ENST00000490692 MLXIPLQ9NP71 852 aa12.68□□□□□ -0.38
PCSK9-202ENST00000490692 SLC39A2Q9NP94 309 aa12.68□□□□□ -0.38
PCSK9-202ENST00000490692 TSPY2A6NKD2 308 aa12.68□□□□□ -0.38
PCSK9-202ENST00000490692 KCNV1Q6PIU1 500 aa12.68□□□□□ -0.38
PCSK9-202ENST00000490692 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.68□□□□□ -0.38
PCSK9-202ENST00000490692 INTS8Q75QN2 995 aaKnown RBP12.68□□□□□ -0.38
PCSK9-202ENST00000490692 MAEAQ7L5Y9 396 aa12.68□□□□□ -0.38
PCSK9-202ENST00000490692 MB21D2Q8IYB1 491 aaPredicted RBP12.68□□□□□ -0.38
PCSK9-202ENST00000490692 STAG1Q8WVM7 1258 aa12.68□□□□□ -0.38
PCSK9-202ENST00000490692 INTS9Q9NV88 658 aaKnown RBP12.68□□□□□ -0.38
PCSK9-202ENST00000490692 SNX12Q9UMY4 172 aa12.68□□□□□ -0.38
PCSK9-202ENST00000490692 A0A1W2PRG0 241 aa12.67□□□□□ -0.38
PCSK9-202ENST00000490692 CYP7A1P22680 504 aa12.67□□□□□ -0.38
PCSK9-202ENST00000490692 AMPD3Q01432 767 aa12.67□□□□□ -0.38
PCSK9-202ENST00000490692 PSMD2Q13200 908 aa12.67□□□□□ -0.38
PCSK9-202ENST00000490692 RASGRP4Q8TDF6 673 aa12.67□□□□□ -0.38
PCSK9-202ENST00000490692 FBXO2Q9UK22 296 aaPredicted RBP12.67□□□□□ -0.38
PCSK9-202ENST00000490692 SERPINA10Q9UK55 444 aa12.67□□□□□ -0.38
PCSK9-202ENST00000490692 HPS5Q9UPZ3 1129 aa12.67□□□□□ -0.38
PCSK9-202ENST00000490692 UTP11Q9Y3A2 253 aaKnown RBP12.67□□□□□ -0.38
PCSK9-202ENST00000490692 L3MBTL1Q9Y468 752 aa12.67□□□□□ -0.38
PCSK9-202ENST00000490692 PDE2AO00408 941 aaPredicted RBP12.67□□□□□ -0.38
PCSK9-202ENST00000490692 ZNF18P17022 549 aa12.67□□□□□ -0.38
PCSK9-202ENST00000490692 KLHL30Q0D2K2 578 aa12.67□□□□□ -0.38
PCSK9-202ENST00000490692 PTPAQ15257 358 aa12.67□□□□□ -0.38
PCSK9-202ENST00000490692 LETM2Q2VYF4 491 aa12.67□□□□□ -0.38
PCSK9-202ENST00000490692 DDX42Q86XP3 938 aaKnown RBP eCLIP12.67□□□□□ -0.38
PCSK9-202ENST00000490692 NOP53Q9NZM5 478 aaKnown RBP12.67□□□□□ -0.38
PCSK9-202ENST00000490692 RWDD2AQ9UIY3 292 aa12.67□□□□□ -0.38
PCSK9-202ENST00000490692 HPSEQ9Y251 543 aa12.67□□□□□ -0.38
PCSK9-202ENST00000490692 USP31Q70CQ4 1352 aa12.67□□□□□ -0.38
PCSK9-202ENST00000490692 LRRD1A4D1F6 860 aa12.67□□□□□ -0.38
PCSK9-202ENST00000490692 OPLAHO14841 1288 aa12.67□□□□□ -0.38
PCSK9-202ENST00000490692 SMTNP53814 917 aa12.67□□□□□ -0.38
PCSK9-202ENST00000490692 IRX1P78414 480 aaPredicted RBP12.67□□□□□ -0.38
PCSK9-202ENST00000490692 ZBED6P86452 979 aa12.67□□□□□ -0.38
PCSK9-202ENST00000490692 CCDC26Q8TAB7 109 aa12.67□□□□□ -0.38
PCSK9-202ENST00000490692 HSD3B7Q9H2F3 369 aa12.67□□□□□ -0.38
PCSK9-202ENST00000490692 CCDC160A6NGH7 325 aa12.66□□□□□ -0.38
PCSK9-202ENST00000490692 ANTXR2P58335 489 aa12.66□□□□□ -0.38
PCSK9-202ENST00000490692 TSC22D3Q99576 134 aa12.66□□□□□ -0.38
PCSK9-202ENST00000490692 VCPKMTQ9H867 229 aa12.66□□□□□ -0.38
PCSK9-202ENST00000490692 TRMT112Q9UI30 125 aaKnown RBP12.66□□□□□ -0.38
PCSK9-202ENST00000490692 STX8Q9UNK0 236 aa12.66□□□□□ -0.38
PCSK9-202ENST00000490692 KAT6BQ8WYB5 2073 aa12.66□□□□□ -0.38
PCSK9-202ENST00000490692 EVI5O60447 810 aa12.66□□□□□ -0.38
PCSK9-202ENST00000490692 PLEKP08567 350 aaPredicted RBP12.66□□□□□ -0.38
PCSK9-202ENST00000490692 CCDC38Q502W7 563 aa12.66□□□□□ -0.38
PCSK9-202ENST00000490692 MDM1Q8TC05 714 aa12.66□□□□□ -0.38
PCSK9-202ENST00000490692 STAMBPL1Q96FJ0 436 aa12.66□□□□□ -0.38
PCSK9-202ENST00000490692 KAZALD1Q96I82 304 aa12.66□□□□□ -0.38
PCSK9-202ENST00000490692 SEC16BQ96JE7 1060 aa12.66□□□□□ -0.38
PCSK9-202ENST00000490692 G3BP2Q9UN86 482 aaKnown RBP12.66□□□□□ -0.38
PCSK9-202ENST00000490692 KNDC1Q76NI1 1749 aa12.66□□□□□ -0.38
PCSK9-202ENST00000490692 PSMD14O00487 310 aa12.66□□□□□ -0.38
PCSK9-202ENST00000490692 AARSP49588 968 aaKnown RBP eCLIP12.66□□□□□ -0.38
PCSK9-202ENST00000490692 GFPT1Q06210 699 aaPredicted RBP12.66□□□□□ -0.38
PCSK9-202ENST00000490692 AKNAD1Q5T1N1 836 aa12.66□□□□□ -0.38
PCSK9-202ENST00000490692 PEX26Q7Z412 305 aa12.66□□□□□ -0.38
PCSK9-202ENST00000490692 KIF2BQ8N4N8 673 aa12.66□□□□□ -0.38
PCSK9-202ENST00000490692 FOXP1Q9H334 677 aaPredicted RBP12.66□□□□□ -0.38
PCSK9-202ENST00000490692 DIP2AQ14689 1571 aa12.66□□□□□ -0.38
PCSK9-202ENST00000490692 CEP170BQ9Y4F5 1589 aaPredicted RBP12.66□□□□□ -0.38
PCSK9-202ENST00000490692 FMNL1O95466 1100 aaPredicted RBP12.65□□□□□ -0.38
PCSK9-202ENST00000490692 FAM107AO95990 144 aa12.65□□□□□ -0.38
PCSK9-202ENST00000490692 CRYMQ14894 314 aa12.65□□□□□ -0.38
PCSK9-202ENST00000490692 DENND2CQ68D51 928 aa12.65□□□□□ -0.38
PCSK9-202ENST00000490692 OTUD6AQ7L8S5 288 aa12.65□□□□□ -0.38
PCSK9-202ENST00000490692 HOOK3Q86VS8 718 aa12.65□□□□□ -0.38
PCSK9-202ENST00000490692 NELFCDQ8IXH7 590 aa12.65□□□□□ -0.38
PCSK9-202ENST00000490692 ARHGEF2Q92974 986 aaKnown RBP12.65□□□□□ -0.38
PCSK9-202ENST00000490692 NOD2Q9HC29 1040 aa12.65□□□□□ -0.38
PCSK9-202ENST00000490692 CAPN6Q9Y6Q1 641 aa12.65□□□□□ -0.38
PCSK9-202ENST00000490692 LGALS16A8MUM7 142 aa12.65□□□□□ -0.38
PCSK9-202ENST00000490692 POLR2FP61218 127 aaKnown RBP12.65□□□□□ -0.38
PCSK9-202ENST00000490692 MFSD4BQ5TF39 518 aa12.65□□□□□ -0.38
PCSK9-202ENST00000490692 ZNF658Q5TYW1 1059 aaPredicted RBP12.65□□□□□ -0.38
PCSK9-202ENST00000490692 TTLL7Q6ZT98 887 aa12.65□□□□□ -0.38
PCSK9-202ENST00000490692 DZIP3Q86Y13 1208 aaKnown RBP12.65□□□□□ -0.38
PCSK9-202ENST00000490692 SH3GL3Q99963 347 aa12.65□□□□□ -0.38
PCSK9-202ENST00000490692 SETD1AO15047 1707 aaKnown RBP12.65□□□□□ -0.38
PCSK9-202ENST00000490692 ANO9A1A5B4 782 aa12.65□□□□□ -0.38
PCSK9-202ENST00000490692 PALMO75781 387 aa12.65□□□□□ -0.38
PCSK9-202ENST00000490692 RANBP1P43487 201 aa12.65□□□□□ -0.38
PCSK9-202ENST00000490692 MUM1Q2TAK8 710 aa12.65□□□□□ -0.38
PCSK9-202ENST00000490692 TTMPQ5BVD1 217 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms