RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 PCDHA6Q9UN73 950 aa15.15■□□□□ 0.02
SNX12-205ENST00000490561 PCDHA8Q9Y5H6 950 aa15.15■□□□□ 0.02
SNX12-205ENST00000490561 M0R2N6 131 aa15.14■□□□□ 0.01
SNX12-205ENST00000490561 NFIBO00712 420 aa15.14■□□□□ 0.01
SNX12-205ENST00000490561 MEIS2O14770 477 aa15.14■□□□□ 0.01
SNX12-205ENST00000490561 OPLAHO14841 1288 aa15.14■□□□□ 0.01
SNX12-205ENST00000490561 ERCC3P19447 782 aa15.14■□□□□ 0.01
SNX12-205ENST00000490561 CRHR2Q13324 411 aa15.14■□□□□ 0.01
SNX12-205ENST00000490561 PKP1Q13835 747 aa15.14■□□□□ 0.01
SNX12-205ENST00000490561 NONOQ15233 471 aaKnown RBP eCLIP15.14■□□□□ 0.01
SNX12-205ENST00000490561 RILPL1Q5EBL4 403 aa15.14■□□□□ 0.01
SNX12-205ENST00000490561 MUM1L1Q5H9M0 696 aa15.14■□□□□ 0.01
SNX12-205ENST00000490561 C17orf99Q6UX52 265 aa15.14■□□□□ 0.01
SNX12-205ENST00000490561 FERMT3Q86UX7 667 aa15.14■□□□□ 0.01
SNX12-205ENST00000490561 ABRAQ8N0Z2 381 aa15.14■□□□□ 0.01
SNX12-205ENST00000490561 OXER1Q8TDS5 423 aa15.14■□□□□ 0.01
SNX12-205ENST00000490561 TNFRSF25Q93038 417 aa15.14■□□□□ 0.01
SNX12-205ENST00000490561 ZNF396Q96N95 335 aaPredicted RBP15.14■□□□□ 0.01
SNX12-205ENST00000490561 NAP1L4Q99733 375 aaKnown RBP15.14■□□□□ 0.01
SNX12-205ENST00000490561 SAGE1Q9NXZ1 904 aa15.14■□□□□ 0.01
SNX12-205ENST00000490561 ZDHHC9Q9Y397 364 aa15.14■□□□□ 0.01
SNX12-205ENST00000490561 RIPK3Q9Y572 518 aa15.14■□□□□ 0.01
SNX12-205ENST00000490561 RBBP6Q7Z6E9 1792 aaKnown RBP15.13■□□□□ 0.01
SNX12-205ENST00000490561 KIF28PB7ZC32 967 aa15.13■□□□□ 0.01
SNX12-205ENST00000490561 STRNO43815 780 aa15.13■□□□□ 0.01
SNX12-205ENST00000490561 NR5A1Q13285 461 aa15.13■□□□□ 0.01
SNX12-205ENST00000490561 KCTD2Q14681 263 aa15.13■□□□□ 0.01
SNX12-205ENST00000490561 Q3C1V9 767 aa15.13■□□□□ 0.01
SNX12-205ENST00000490561 JAKMIP3Q5VZ66 844 aa15.13■□□□□ 0.01
SNX12-205ENST00000490561 NSMFQ6X4W1 530 aa15.13■□□□□ 0.01
SNX12-205ENST00000490561 ANKRD35Q8N283 1001 aa15.13■□□□□ 0.01
SNX12-205ENST00000490561 BIN2Q9UBW5 565 aaPredicted RBP15.13■□□□□ 0.01
SNX12-205ENST00000490561 CPA4Q9UI42 421 aa15.13■□□□□ 0.01
SNX12-205ENST00000490561 IVNS1ABPQ9Y6Y0 642 aa15.13■□□□□ 0.01
SNX12-205ENST00000490561 B4DLN1 442 aa15.12■□□□□ 0.01
SNX12-205ENST00000490561 FCER1AP12319 257 aa15.12■□□□□ 0.01
SNX12-205ENST00000490561 TAL1P17542 331 aaPredicted RBP15.12■□□□□ 0.01
SNX12-205ENST00000490561 RPS6P62753 249 aaKnown RBP15.12■□□□□ 0.01
SNX12-205ENST00000490561 MAP2K1Q02750 393 aaPredicted RBP15.12■□□□□ 0.01
SNX12-205ENST00000490561 ORC2Q13416 577 aaPredicted RBP15.12■□□□□ 0.01
SNX12-205ENST00000490561 UBE2SQ16763 222 aa15.12■□□□□ 0.01
SNX12-205ENST00000490561 FOXD4L5Q5VV16 416 aaPredicted RBP15.12■□□□□ 0.01
SNX12-205ENST00000490561 MYSM1Q5VVJ2 828 aa15.12■□□□□ 0.01
SNX12-205ENST00000490561 USP17L6PQ6QN14 398 aa15.12■□□□□ 0.01
SNX12-205ENST00000490561 PIK3AP1Q6ZUJ8 805 aa15.12■□□□□ 0.01
SNX12-205ENST00000490561 SYTL5Q8TDW5 730 aaPredicted RBP15.12■□□□□ 0.01
SNX12-205ENST00000490561 FOXD4L4Q8WXT5 416 aaPredicted RBP15.12■□□□□ 0.01
SNX12-205ENST00000490561 MMP19Q99542 508 aa15.12■□□□□ 0.01
SNX12-205ENST00000490561 MPHOSPH6Q99547 160 aaKnown RBP15.12■□□□□ 0.01
SNX12-205ENST00000490561 ANO3Q9BYT9 981 aa15.12■□□□□ 0.01
SNX12-205ENST00000490561 A1CFQ9NQ94 594 aaKnown RBP15.12■□□□□ 0.01
SNX12-205ENST00000490561 LOC102724159A0A0B4J2E5 919 aa15.11■□□□□ 0.01
SNX12-205ENST00000490561 BMP15O95972 392 aa15.11■□□□□ 0.01
SNX12-205ENST00000490561 HTRA3P83110 453 aa15.11■□□□□ 0.01
SNX12-205ENST00000490561 BAATQ14032 418 aaPredicted RBP15.11■□□□□ 0.01
SNX12-205ENST00000490561 PWP2Q15269 919 aaKnown RBP15.11■□□□□ 0.01
SNX12-205ENST00000490561 WDR78Q5VTH9 848 aa15.11■□□□□ 0.01
SNX12-205ENST00000490561 XRRA1Q6P2D8 792 aa15.11■□□□□ 0.01
SNX12-205ENST00000490561 PLEKHH3Q7Z736 793 aa15.11■□□□□ 0.01
SNX12-205ENST00000490561 DNERQ8NFT8 737 aa15.11■□□□□ 0.01
SNX12-205ENST00000490561 RASGRP4Q8TDF6 673 aa15.11■□□□□ 0.01
SNX12-205ENST00000490561 RNF186Q9NXI6 227 aa15.11■□□□□ 0.01
SNX12-205ENST00000490561 SLC5A4Q9NY91 659 aa15.11■□□□□ 0.01
SNX12-205ENST00000490561 CYP39A1Q9NYL5 469 aa15.11■□□□□ 0.01
SNX12-205ENST00000490561 ADD3Q9UEY8 706 aaKnown RBP15.11■□□□□ 0.01
SNX12-205ENST00000490561 CFAP45Q9UL16 551 aa15.11■□□□□ 0.01
SNX12-205ENST00000490561 SLC15A5A6NIM6 579 aa15.1■□□□□ 0.01
SNX12-205ENST00000490561 POTEB2H3BUK9 544 aa15.1■□□□□ 0.01
SNX12-205ENST00000490561 HOXA13P31271 388 aaPredicted RBP15.1■□□□□ 0.01
SNX12-205ENST00000490561 SREBF1P36956 1147 aa15.1■□□□□ 0.01
SNX12-205ENST00000490561 USP11P51784 963 aa15.1■□□□□ 0.01
SNX12-205ENST00000490561 KRT85P78386 507 aa15.1■□□□□ 0.01
SNX12-205ENST00000490561 NOM1Q5C9Z4 860 aaKnown RBP15.1■□□□□ 0.01
SNX12-205ENST00000490561 SLC30A10Q6XR72 485 aa15.1■□□□□ 0.01
SNX12-205ENST00000490561 NEK8Q86SG6 692 aa15.1■□□□□ 0.01
SNX12-205ENST00000490561 FCHSD1Q86WN1 690 aa15.1■□□□□ 0.01
SNX12-205ENST00000490561 TBCKQ8TEA7 893 aa15.1■□□□□ 0.01
SNX12-205ENST00000490561 TNPO1Q92973 898 aaKnown RBP15.1■□□□□ 0.01
SNX12-205ENST00000490561 GBP4Q96PP9 640 aa15.1■□□□□ 0.01
SNX12-205ENST00000490561 BEGAINQ9BUH8 593 aa15.1■□□□□ 0.01
SNX12-205ENST00000490561 PORCNQ9H237 461 aa15.1■□□□□ 0.01
SNX12-205ENST00000490561 EFCC1Q9HA90 598 aa15.1■□□□□ 0.01
SNX12-205ENST00000490561 TMEM260Q9NX78 707 aa15.1■□□□□ 0.01
SNX12-205ENST00000490561 CEP131Q9UPN4 1083 aa15.1■□□□□ 0.01
SNX12-205ENST00000490561 FRMPD4Q14CM0 1322 aa15.1■□□□□ 0.01
SNX12-205ENST00000490561 PEX10O60683 326 aa15.09■□□□□ 0.01
SNX12-205ENST00000490561 CYP3A4P08684 503 aa15.09■□□□□ 0.01
SNX12-205ENST00000490561 GCFC2P16383 781 aaKnown RBP15.09■□□□□ 0.01
SNX12-205ENST00000490561 KIF22Q14807 665 aa15.09■□□□□ 0.01
SNX12-205ENST00000490561 CSPP1Q1MSJ5 1256 aa15.09■□□□□ 0.01
SNX12-205ENST00000490561 MOXD1Q6UVY6 613 aa15.09■□□□□ 0.01
SNX12-205ENST00000490561 GPR142Q7Z601 462 aa15.09■□□□□ 0.01
SNX12-205ENST00000490561 NSUN6Q8TEA1 469 aaKnown RBP15.09■□□□□ 0.01
SNX12-205ENST00000490561 TBC1D5Q92609 795 aa15.09■□□□□ 0.01
SNX12-205ENST00000490561 IWS1Q96ST2 819 aa15.09■□□□□ 0.01
SNX12-205ENST00000490561 RPTORQ8N122 1335 aa15.09■□□□□ 0.01
SNX12-205ENST00000490561 TRPA1O75762 1119 aa15.08■□□□□ 0
SNX12-205ENST00000490561 STAM2O75886 525 aa15.08■□□□□ 0
SNX12-205ENST00000490561 PTPREP23469 700 aa15.08■□□□□ 0
SNX12-205ENST00000490561 FCGRTP55899 365 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms