RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 A0A0C4DFX4 3053 aa12.13□□□□□ -0.47
TTC28-207ENST00000490475 PTPDC1A2A3K4 754 aa12.12□□□□□ -0.47
TTC28-207ENST00000490475 DYNC1LI2O43237 492 aaPredicted RBP12.12□□□□□ -0.47
TTC28-207ENST00000490475 ADCY6O43306 1168 aa12.12□□□□□ -0.47
TTC28-207ENST00000490475 KPNA6O60684 536 aa12.12□□□□□ -0.47
TTC28-207ENST00000490475 ITGB8P26012 769 aa12.12□□□□□ -0.47
TTC28-207ENST00000490475 ALDH5A1P51649 535 aaPredicted RBP12.12□□□□□ -0.47
TTC28-207ENST00000490475 ITGA7Q13683 1181 aa12.12□□□□□ -0.47
TTC28-207ENST00000490475 BAATQ14032 418 aaPredicted RBP12.12□□□□□ -0.47
TTC28-207ENST00000490475 IMMTQ16891 758 aaKnown RBP12.12□□□□□ -0.47
TTC28-207ENST00000490475 TAPT1Q6NXT6 567 aa12.12□□□□□ -0.47
TTC28-207ENST00000490475 RNF207Q6ZRF8 634 aa12.12□□□□□ -0.47
TTC28-207ENST00000490475 DSCC1Q9BVC3 393 aa12.12□□□□□ -0.47
TTC28-207ENST00000490475 KRT23Q9C075 422 aa12.12□□□□□ -0.47
TTC28-207ENST00000490475 GPHNQ9NQX3 736 aaPredicted RBP12.12□□□□□ -0.47
TTC28-207ENST00000490475 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.11□□□□□ -0.47
TTC28-207ENST00000490475 CTAGE5O15320 804 aa12.11□□□□□ -0.47
TTC28-207ENST00000490475 CD4P01730 458 aa12.11□□□□□ -0.47
TTC28-207ENST00000490475 SMPD1P17405 629 aa12.11□□□□□ -0.47
TTC28-207ENST00000490475 SLC16A2P36021 539 aa12.11□□□□□ -0.47
TTC28-207ENST00000490475 PTH1RQ03431 593 aa12.11□□□□□ -0.47
TTC28-207ENST00000490475 PDE4DQ08499 809 aa12.11□□□□□ -0.47
TTC28-207ENST00000490475 TRAF1Q13077 416 aa12.11□□□□□ -0.47
TTC28-207ENST00000490475 ASPRV1Q53RT3 343 aa12.11□□□□□ -0.47
TTC28-207ENST00000490475 BMP2KLQ5H9B9 411 aa12.11□□□□□ -0.47
TTC28-207ENST00000490475 CXCL17Q6UXB2 119 aa12.11□□□□□ -0.47
TTC28-207ENST00000490475 MCF2L2Q86YR7 1114 aa12.11□□□□□ -0.47
TTC28-207ENST00000490475 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.11□□□□□ -0.47
TTC28-207ENST00000490475 FBXO16Q8IX29 292 aaPredicted RBP12.11□□□□□ -0.47
TTC28-207ENST00000490475 RPUSD2Q8IZ73 545 aaKnown RBP12.11□□□□□ -0.47
TTC28-207ENST00000490475 SCFD2Q8WU76 684 aa12.11□□□□□ -0.47
TTC28-207ENST00000490475 RUFY2Q8WXA3 655 aa12.11□□□□□ -0.47
TTC28-207ENST00000490475 FAM161BQ96MY7 647 aa12.11□□□□□ -0.47
TTC28-207ENST00000490475 CDX2Q99626 313 aaPredicted RBP12.11□□□□□ -0.47
TTC28-207ENST00000490475 WDR11Q9BZH6 1224 aa12.11□□□□□ -0.47
TTC28-207ENST00000490475 HIPK3Q9H422 1215 aa12.11□□□□□ -0.47
TTC28-207ENST00000490475 KAT14Q9H8E8 782 aa12.11□□□□□ -0.47
TTC28-207ENST00000490475 GPCPD1Q9NPB8 672 aa12.11□□□□□ -0.47
TTC28-207ENST00000490475 LAMA4Q16363 1823 aa12.11□□□□□ -0.47
TTC28-207ENST00000490475 LRRC37A2A6NM11 1700 aa12.11□□□□□ -0.47
TTC28-207ENST00000490475 FRMPD2Q68DX3 1309 aaPredicted RBP12.11□□□□□ -0.47
TTC28-207ENST00000490475 RBM47A0AV96 593 aaKnown RBP12.1□□□□□ -0.47
TTC28-207ENST00000490475 SGSM2O43147 1006 aa12.1□□□□□ -0.47
TTC28-207ENST00000490475 PFKMP08237 780 aa12.1□□□□□ -0.47
TTC28-207ENST00000490475 DNAJB2P25686 324 aa12.1□□□□□ -0.47
TTC28-207ENST00000490475 BEX3Q00994 111 aa12.1□□□□□ -0.47
TTC28-207ENST00000490475 PPP2R5BQ15173 497 aa12.1□□□□□ -0.47
TTC28-207ENST00000490475 RAB30Q15771 203 aa12.1□□□□□ -0.47
TTC28-207ENST00000490475 TTBK2Q6IQ55 1244 aa12.1□□□□□ -0.47
TTC28-207ENST00000490475 EEPD1Q7L9B9 569 aa12.1□□□□□ -0.47
TTC28-207ENST00000490475 PNMA1Q8ND90 353 aa12.1□□□□□ -0.47
TTC28-207ENST00000490475 MAFAQ8NHW3 353 aaPredicted RBP12.1□□□□□ -0.47
TTC28-207ENST00000490475 ANKS1AQ92625 1134 aa12.1□□□□□ -0.47
TTC28-207ENST00000490475 CHMP4CQ96CF2 233 aa12.1□□□□□ -0.47
TTC28-207ENST00000490475 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.1□□□□□ -0.479e-6■■■■■ 27.7
TTC28-207ENST00000490475 IL23AQ9NPF7 189 aa12.1□□□□□ -0.47
TTC28-207ENST00000490475 TSHZ2Q9NRE2 1034 aa12.1□□□□□ -0.47
TTC28-207ENST00000490475 MYO9BQ13459 2157 aa12.1□□□□□ -0.47
TTC28-207ENST00000490475 ASTN1O14525 1302 aa12.1□□□□□ -0.47
TTC28-207ENST00000490475 ABCB11O95342 1321 aa12.1□□□□□ -0.47
TTC28-207ENST00000490475 NFIBO00712 420 aa12.09□□□□□ -0.47
TTC28-207ENST00000490475 FOSL2P15408 326 aa12.09□□□□□ -0.47
TTC28-207ENST00000490475 CSF2RAP15509 400 aa12.09□□□□□ -0.47
TTC28-207ENST00000490475 CALML3P27482 149 aa12.09□□□□□ -0.47
TTC28-207ENST00000490475 EPHB4P54760 987 aa12.09□□□□□ -0.47
TTC28-207ENST00000490475 SNAP25P60880 206 aa12.09□□□□□ -0.47
TTC28-207ENST00000490475 RPS6P62753 249 aaKnown RBP12.09□□□□□ -0.47
TTC28-207ENST00000490475 TTLL4Q14679 1199 aa12.09□□□□□ -0.47
TTC28-207ENST00000490475 TMEM240Q5SV17 173 aa12.09□□□□□ -0.47
TTC28-207ENST00000490475 TBC1D10CQ8IV04 446 aa12.09□□□□□ -0.47
TTC28-207ENST00000490475 SAMD3Q8N6K7 520 aa12.09□□□□□ -0.47
TTC28-207ENST00000490475 TIFAQ96CG3 184 aa12.09□□□□□ -0.47
TTC28-207ENST00000490475 ZSCAN10Q96SZ4 725 aaPredicted RBP12.09□□□□□ -0.47
TTC28-207ENST00000490475 UBAC1Q9BSL1 405 aa12.09□□□□□ -0.47
TTC28-207ENST00000490475 PDGFCQ9NRA1 345 aa12.09□□□□□ -0.47
TTC28-207ENST00000490475 MSRAQ9UJ68 235 aa12.09□□□□□ -0.47
TTC28-207ENST00000490475 LCTP09848 1927 aa12.09□□□□□ -0.47
TTC28-207ENST00000490475 MYH6P13533 1939 aa12.09□□□□□ -0.47
TTC28-207ENST00000490475 KDM4AO75164 1064 aa12.08□□□□□ -0.48
TTC28-207ENST00000490475 FGBP02675 491 aa12.08□□□□□ -0.48
TTC28-207ENST00000490475 EDNRBP24530 442 aa12.08□□□□□ -0.48
TTC28-207ENST00000490475 PTPN11Q06124 597 aaPredicted RBP12.08□□□□□ -0.48
TTC28-207ENST00000490475 TRDNQ13061 729 aa12.08□□□□□ -0.48
TTC28-207ENST00000490475 RASIP1Q5U651 963 aa12.08□□□□□ -0.48
TTC28-207ENST00000490475 OR6J1Q8NGC5 347 aa12.08□□□□□ -0.48
TTC28-207ENST00000490475 NSUN6Q8TEA1 469 aaKnown RBP12.08□□□□□ -0.48
TTC28-207ENST00000490475 CLEC4DQ8WXI8 215 aa12.08□□□□□ -0.48
TTC28-207ENST00000490475 HERVK_113Q902F9 699 aa12.08□□□□□ -0.48
TTC28-207ENST00000490475 IWS1Q96ST2 819 aa12.08□□□□□ -0.48
TTC28-207ENST00000490475 ESYT1Q9BSJ8 1104 aa12.08□□□□□ -0.48
TTC28-207ENST00000490475 MTG1Q9BT17 334 aaPredicted RBP12.08□□□□□ -0.48
TTC28-207ENST00000490475 PPP1R12CQ9BZL4 782 aa12.08□□□□□ -0.48
TTC28-207ENST00000490475 TTYH1Q9H313 450 aaPredicted RBP12.08□□□□□ -0.48
TTC28-207ENST00000490475 ZNF576Q9H609 170 aa12.08□□□□□ -0.48
TTC28-207ENST00000490475 MAP3K20Q9NYL2 800 aaKnown RBP12.08□□□□□ -0.48
TTC28-207ENST00000490475 MRPL11Q9Y3B7 192 aaKnown RBP12.08□□□□□ -0.48
TTC28-207ENST00000490475 PARP1P09874 1014 aaKnown RBP12.07□□□□□ -0.48
TTC28-207ENST00000490475 RFC2P35250 354 aa12.07□□□□□ -0.48
TTC28-207ENST00000490475 IRX5P78411 483 aaPredicted RBP12.07□□□□□ -0.48
TTC28-207ENST00000490475 PURAQ00577 322 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms