RNA–Protein interactions for RNA: ENST00000490441.1

DUBR-204, DPPA2 upstream binding RNA, humanhuman

TSL 1 (best) BASIC

Gene DUBR, Length 1,149 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-204ENST00000490441 GNEQ9Y223 722 aaKnown RBP13.21□□□□□ -0.29
DUBR-204ENST00000490441 ASTN1O14525 1302 aa13.2□□□□□ -0.3
DUBR-204ENST00000490441 LOC102724159A0A0B4J2E5 919 aa13.2□□□□□ -0.3
DUBR-204ENST00000490441 DLL1O00548 723 aa13.2□□□□□ -0.3
DUBR-204ENST00000490441 NFIBO00712 420 aa13.2□□□□□ -0.3
DUBR-204ENST00000490441 DYNC1LI2O43237 492 aaPredicted RBP13.2□□□□□ -0.3
DUBR-204ENST00000490441 SMPD1P17405 629 aa13.2□□□□□ -0.3
DUBR-204ENST00000490441 CALML3P27482 149 aa13.2□□□□□ -0.3
DUBR-204ENST00000490441 EPHB4P54760 987 aa13.2□□□□□ -0.3
DUBR-204ENST00000490441 NKX3-2P78367 333 aa13.2□□□□□ -0.3
DUBR-204ENST00000490441 ZNF543Q08ER8 600 aa13.2□□□□□ -0.3
DUBR-204ENST00000490441 PWP2Q15269 919 aaKnown RBP13.2□□□□□ -0.3
DUBR-204ENST00000490441 GPATCH4Q5T3I0 446 aaKnown RBP13.2□□□□□ -0.3
DUBR-204ENST00000490441 MFSD5Q6N075 450 aa13.2□□□□□ -0.3
DUBR-204ENST00000490441 KIAA1211Q6ZU35 1233 aa13.2□□□□□ -0.3
DUBR-204ENST00000490441 TMEM199Q8N511 208 aa13.2□□□□□ -0.3
DUBR-204ENST00000490441 EXOC6Q8TAG9 804 aa13.2□□□□□ -0.3
DUBR-204ENST00000490441 PDGFCQ9NRA1 345 aa13.2□□□□□ -0.3
DUBR-204ENST00000490441 Q9Y3F1 56 aa13.2□□□□□ -0.3
DUBR-204ENST00000490441 DDX49Q9Y6V7 483 aaKnown RBP13.2□□□□□ -0.3
DUBR-204ENST00000490441 NEDD4P46934 1319 aa13.19□□□□□ -0.3
DUBR-204ENST00000490441 WDR19Q8NEZ3 1342 aa13.19□□□□□ -0.3
DUBR-204ENST00000490441 CTAGE5O15320 804 aa13.19□□□□□ -0.3
DUBR-204ENST00000490441 IGHDP01880 384 aa13.19□□□□□ -0.3
DUBR-204ENST00000490441 ALDH5A1P51649 535 aaPredicted RBP13.19□□□□□ -0.3
DUBR-204ENST00000490441 IMMTQ16891 758 aaKnown RBP13.19□□□□□ -0.3
DUBR-204ENST00000490441 TAPT1Q6NXT6 567 aa13.19□□□□□ -0.3
DUBR-204ENST00000490441 RNF207Q6ZRF8 634 aa13.19□□□□□ -0.3
DUBR-204ENST00000490441 DGKHQ86XP1 1220 aa13.19□□□□□ -0.3
DUBR-204ENST00000490441 FAM126BQ8IXS8 530 aa13.19□□□□□ -0.3
DUBR-204ENST00000490441 MORC4Q8TE76 937 aa13.19□□□□□ -0.3
DUBR-204ENST00000490441 PURBQ96QR8 312 aaKnown RBP13.19□□□□□ -0.3
DUBR-204ENST00000490441 ZKSCAN3Q9BRR0 538 aa13.19□□□□□ -0.3
DUBR-204ENST00000490441 SEZ6LQ9BYH1 1024 aa13.19□□□□□ -0.3
DUBR-204ENST00000490441 PPP1R12CQ9BZL4 782 aa13.19□□□□□ -0.3
DUBR-204ENST00000490441 SEMA6BQ9H3T3 888 aa13.19□□□□□ -0.3
DUBR-204ENST00000490441 LAMA2P24043 3122 aaKnown RBP13.19□□□□□ -0.3
DUBR-204ENST00000490441 LRRC37A2A6NM11 1700 aa13.19□□□□□ -0.3
DUBR-204ENST00000490441 TMEM265A0A087WTH1 108 aa13.18□□□□□ -0.3
DUBR-204ENST00000490441 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.18□□□□□ -0.3
DUBR-204ENST00000490441 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.18□□□□□ -0.3
DUBR-204ENST00000490441 B4DLN1 442 aa13.18□□□□□ -0.3
DUBR-204ENST00000490441 KDM4AO75164 1064 aa13.18□□□□□ -0.3
DUBR-204ENST00000490441 SNHG28P0DPA3 235 aa13.18□□□□□ -0.3
DUBR-204ENST00000490441 MRPL12P52815 198 aaKnown RBP13.18□□□□□ -0.3
DUBR-204ENST00000490441 PDE4DQ08499 809 aa13.18□□□□□ -0.3
DUBR-204ENST00000490441 ITGA7Q13683 1181 aa13.18□□□□□ -0.3
DUBR-204ENST00000490441 SLC30A10Q6XR72 485 aa13.18□□□□□ -0.3
DUBR-204ENST00000490441 CDX2Q99626 313 aaPredicted RBP13.18□□□□□ -0.3
DUBR-204ENST00000490441 DSCC1Q9BVC3 393 aa13.18□□□□□ -0.3
DUBR-204ENST00000490441 KAT14Q9H8E8 782 aa13.18□□□□□ -0.3
DUBR-204ENST00000490441 CTNNA3Q9UI47 895 aa13.18□□□□□ -0.3
DUBR-204ENST00000490441 GOLGA8HP0CJ92 632 aa13.17□□□□□ -0.3
DUBR-204ENST00000490441 CSF2RAP15509 400 aa13.17□□□□□ -0.3
DUBR-204ENST00000490441 RPS6P62753 249 aaKnown RBP13.17□□□□□ -0.3
DUBR-204ENST00000490441 USH1GQ495M9 461 aa13.17□□□□□ -0.3
DUBR-204ENST00000490441 DUSP28Q4G0W2 176 aa13.17□□□□□ -0.3
DUBR-204ENST00000490441 BRDTQ58F21 947 aaPredicted RBP13.17□□□□□ -0.3
DUBR-204ENST00000490441 PSRC1Q6PGN9 363 aaPredicted RBP13.17□□□□□ -0.3
DUBR-204ENST00000490441 PNMA1Q8ND90 353 aa13.17□□□□□ -0.3
DUBR-204ENST00000490441 CLEC4DQ8WXI8 215 aa13.17□□□□□ -0.3
DUBR-204ENST00000490441 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.17□□□□□ -0.3
DUBR-204ENST00000490441 WDR11Q9BZH6 1224 aa13.17□□□□□ -0.3
DUBR-204ENST00000490441 HIPK3Q9H422 1215 aa13.17□□□□□ -0.3
DUBR-204ENST00000490441 GPHNQ9NQX3 736 aaPredicted RBP13.17□□□□□ -0.3
DUBR-204ENST00000490441 POLR3EQ9NVU0 708 aa13.17□□□□□ -0.3
DUBR-204ENST00000490441 MYO9BQ13459 2157 aa13.17□□□□□ -0.3
DUBR-204ENST00000490441 RAD50Q92878 1312 aa13.16□□□□□ -0.3
DUBR-204ENST00000490441 LAMA4Q16363 1823 aa13.16□□□□□ -0.3
DUBR-204ENST00000490441 LCTP09848 1927 aa13.16□□□□□ -0.3
DUBR-204ENST00000490441 A0A0C4DFX4 3053 aa13.16□□□□□ -0.3
DUBR-204ENST00000490441 B4E1Z4 1266 aa13.16□□□□□ -0.3
DUBR-204ENST00000490441 DHX16O60231 1041 aaKnown RBP13.16□□□□□ -0.3
DUBR-204ENST00000490441 CD4P01730 458 aa13.16□□□□□ -0.3
DUBR-204ENST00000490441 PTGS1P23219 599 aa13.16□□□□□ -0.3
DUBR-204ENST00000490441 DNAJB2P25686 324 aa13.16□□□□□ -0.3
DUBR-204ENST00000490441 CPT1AP50416 773 aa13.16□□□□□ -0.3
DUBR-204ENST00000490441 PPP2R5BQ15173 497 aa13.16□□□□□ -0.3
DUBR-204ENST00000490441 SLC43A3Q8NBI5 491 aa13.16□□□□□ -0.3
DUBR-204ENST00000490441 DNERQ8NFT8 737 aa13.16□□□□□ -0.3
DUBR-204ENST00000490441 OR6J1Q8NGC5 347 aa13.16□□□□□ -0.3
DUBR-204ENST00000490441 ZSCAN10Q96SZ4 725 aaPredicted RBP13.16□□□□□ -0.3
DUBR-204ENST00000490441 UBAC1Q9BSL1 405 aa13.16□□□□□ -0.3
DUBR-204ENST00000490441 KRT23Q9C075 422 aa13.16□□□□□ -0.3
DUBR-204ENST00000490441 MTIF3Q9H2K0 278 aaKnown RBP13.16□□□□□ -0.3
DUBR-204ENST00000490441 TTYH1Q9H313 450 aaPredicted RBP13.16□□□□□ -0.3
DUBR-204ENST00000490441 CNNM2Q9H8M5 875 aa13.16□□□□□ -0.3
DUBR-204ENST00000490441 NKRFO15226 690 aaKnown RBP eCLIP13.15□□□□□ -0.3
DUBR-204ENST00000490441 MYL3P08590 195 aa13.15□□□□□ -0.3
DUBR-204ENST00000490441 PYGBP11216 843 aa13.15□□□□□ -0.3
DUBR-204ENST00000490441 FOSL2P15408 326 aa13.15□□□□□ -0.3
DUBR-204ENST00000490441 CYP2C18P33260 490 aa13.15□□□□□ -0.3
DUBR-204ENST00000490441 PSMC6P62333 389 aa13.15□□□□□ -0.3
DUBR-204ENST00000490441 CDC37Q16543 378 aaPredicted RBP13.15□□□□□ -0.3
DUBR-204ENST00000490441 ASPRV1Q53RT3 343 aa13.15□□□□□ -0.3
DUBR-204ENST00000490441 TMEM240Q5SV17 173 aa13.15□□□□□ -0.3
DUBR-204ENST00000490441 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.15□□□□□ -0.3
DUBR-204ENST00000490441 MAFAQ8NHW3 353 aaPredicted RBP13.15□□□□□ -0.3
DUBR-204ENST00000490441 SCFD2Q8WU76 684 aa13.15□□□□□ -0.3
DUBR-204ENST00000490441 MYLIPQ8WY64 445 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms