RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 UPF3AQ9H1J1 476 aaKnown RBP20.75■□□□□ 0.91
ABCF3-217ENST00000489719 SENP2Q9HC62 589 aa20.75■□□□□ 0.91
ABCF3-217ENST00000489719 STARD7Q9NQZ5 370 aa20.75■□□□□ 0.91
ABCF3-217ENST00000489719 PDGFCQ9NRA1 345 aa20.75■□□□□ 0.91
ABCF3-217ENST00000489719 DDX49Q9Y6V7 483 aaKnown RBP20.75■□□□□ 0.91
ABCF3-217ENST00000489719 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.74■□□□□ 0.91
ABCF3-217ENST00000489719 CEP290O15078 2479 aa20.74■□□□□ 0.91
ABCF3-217ENST00000489719 ADCY6O43306 1168 aa20.74■□□□□ 0.91
ABCF3-217ENST00000489719 PRC1O43663 620 aa20.74■□□□□ 0.91
ABCF3-217ENST00000489719 CST5P28325 142 aaPredicted RBP20.74■□□□□ 0.91
ABCF3-217ENST00000489719 ANTXR2P58335 489 aa20.74■□□□□ 0.91
ABCF3-217ENST00000489719 TRAF1Q13077 416 aa20.74■□□□□ 0.91
ABCF3-217ENST00000489719 SNX17Q15036 470 aa20.74■□□□□ 0.91
ABCF3-217ENST00000489719 TAPT1Q6NXT6 567 aa20.74■□□□□ 0.91
ABCF3-217ENST00000489719 NFXL1Q6ZNB6 911 aa20.74■□□□□ 0.91
ABCF3-217ENST00000489719 UBE2OQ9C0C9 1292 aaKnown RBP20.74■□□□□ 0.91
ABCF3-217ENST00000489719 ZBTB5O15062 677 aa20.73■□□□□ 0.91
ABCF3-217ENST00000489719 ZEB2O60315 1214 aa20.73■□□□□ 0.91
ABCF3-217ENST00000489719 ASGR1P07306 291 aa20.73■□□□□ 0.91
ABCF3-217ENST00000489719 SMPD1P17405 629 aa20.73■□□□□ 0.91
ABCF3-217ENST00000489719 FXR1P51114 621 aaKnown RBP eCLIP20.73■□□□□ 0.91
ABCF3-217ENST00000489719 MDM2Q00987 491 aaPredicted RBP20.73■□□□□ 0.91
ABCF3-217ENST00000489719 TLE2Q04725 743 aa20.73■□□□□ 0.91
ABCF3-217ENST00000489719 TROAPQ12815 778 aa20.73■□□□□ 0.91
ABCF3-217ENST00000489719 CCSAPQ6IQ19 270 aaPredicted RBP20.73■□□□□ 0.91
ABCF3-217ENST00000489719 TBC1D5Q92609 795 aa20.73■□□□□ 0.91
ABCF3-217ENST00000489719 TMEM87BQ96K49 555 aa20.73■□□□□ 0.91
ABCF3-217ENST00000489719 PRDM5Q9NQX1 630 aaPredicted RBP20.73■□□□□ 0.91
ABCF3-217ENST00000489719 GNEQ9Y223 722 aaKnown RBP20.73■□□□□ 0.91
ABCF3-217ENST00000489719 Q9Y3F1 56 aa20.73■□□□□ 0.91
ABCF3-217ENST00000489719 LAMA4Q16363 1823 aa20.72■□□□□ 0.91
ABCF3-217ENST00000489719 MYADML2A6NDP7 307 aa20.72■□□□□ 0.91
ABCF3-217ENST00000489719 CCDC69A6NI79 296 aa20.72■□□□□ 0.91
ABCF3-217ENST00000489719 IRX5P78411 483 aaPredicted RBP20.72■□□□□ 0.91
ABCF3-217ENST00000489719 TLK2Q86UE8 772 aa20.72■□□□□ 0.91
ABCF3-217ENST00000489719 HOMER1Q86YM7 354 aa20.72■□□□□ 0.91
ABCF3-217ENST00000489719 MTMR8Q96EF0 704 aa20.72■□□□□ 0.91
ABCF3-217ENST00000489719 WDR11Q9BZH6 1224 aa20.72■□□□□ 0.91
ABCF3-217ENST00000489719 RIOX1Q9H6W3 641 aa20.72■□□□□ 0.91
ABCF3-217ENST00000489719 PCDHA1Q9Y5I3 950 aa20.72■□□□□ 0.91
ABCF3-217ENST00000489719 PLXNA1Q9UIW2 1896 aa20.72■□□□□ 0.91
ABCF3-217ENST00000489719 ELP1O95163 1332 aa20.72■□□□□ 0.91
ABCF3-217ENST00000489719 KIF5BP33176 963 aa20.71■□□□□ 0.91
ABCF3-217ENST00000489719 NKX3-2P78367 333 aa20.71■□□□□ 0.91
ABCF3-217ENST00000489719 BEX3Q00994 111 aa20.71■□□□□ 0.91
ABCF3-217ENST00000489719 CTCFLQ8NI51 663 aaPredicted RBP20.71■□□□□ 0.91
ABCF3-217ENST00000489719 SYTL5Q8TDW5 730 aaPredicted RBP20.71■□□□□ 0.91
ABCF3-217ENST00000489719 NSUN6Q8TEA1 469 aaKnown RBP20.71■□□□□ 0.91
ABCF3-217ENST00000489719 MAP3K14Q99558 947 aa20.71■□□□□ 0.91
ABCF3-217ENST00000489719 LY9Q9HBG7 655 aa20.71■□□□□ 0.91
ABCF3-217ENST00000489719 SMCHD1A6NHR9 2005 aa20.71■□□□□ 0.91
ABCF3-217ENST00000489719 DCDC2CA8MYV0 355 aa20.7■□□□□ 0.9
ABCF3-217ENST00000489719 PQBP1O60828 265 aaKnown RBP20.7■□□□□ 0.9
ABCF3-217ENST00000489719 CFBP00751 764 aa20.7■□□□□ 0.9
ABCF3-217ENST00000489719 FSCN1Q16658 493 aaKnown RBP20.7■□□□□ 0.9
ABCF3-217ENST00000489719 DUSP28Q4G0W2 176 aa20.7■□□□□ 0.9
ABCF3-217ENST00000489719 ZNF654Q8IZM8 581 aa20.7■□□□□ 0.9
ABCF3-217ENST00000489719 TAAR1Q96RJ0 339 aa20.7■□□□□ 0.9
ABCF3-217ENST00000489719 PIGSQ96S52 555 aa20.7■□□□□ 0.9
ABCF3-217ENST00000489719 GPHNQ9NQX3 736 aaPredicted RBP20.7■□□□□ 0.9
ABCF3-217ENST00000489719 PNMA6FA0A0J9YX94 578 aa20.69■□□□□ 0.9
ABCF3-217ENST00000489719 RBM47A0AV96 593 aaKnown RBP20.69■□□□□ 0.9
ABCF3-217ENST00000489719 CABYRO75952 493 aa20.69■□□□□ 0.9
ABCF3-217ENST00000489719 DDAH1O94760 285 aa20.69■□□□□ 0.9
ABCF3-217ENST00000489719 LIFRP42702 1097 aa20.69■□□□□ 0.9
ABCF3-217ENST00000489719 GNAQP50148 359 aa20.69■□□□□ 0.9
ABCF3-217ENST00000489719 ARHGEF16Q5VV41 709 aa20.69■□□□□ 0.9
ABCF3-217ENST00000489719 TOX2Q96NM4 488 aa20.69■□□□□ 0.9
ABCF3-217ENST00000489719 NEK1Q96PY6 1258 aa20.69■□□□□ 0.9
ABCF3-217ENST00000489719 IWS1Q96ST2 819 aa20.69■□□□□ 0.9
ABCF3-217ENST00000489719 RMDN3Q96TC7 470 aa20.69■□□□□ 0.9
ABCF3-217ENST00000489719 LZTS2Q9BRK4 669 aa20.69■□□□□ 0.9
ABCF3-217ENST00000489719 MAP3K20Q9NYL2 800 aaKnown RBP20.69■□□□□ 0.9
ABCF3-217ENST00000489719 SH2B2O14492 632 aaPredicted RBP20.68■□□□□ 0.9
ABCF3-217ENST00000489719 CTAGE5O15320 804 aa20.68■□□□□ 0.9
ABCF3-217ENST00000489719 CLTBP09497 229 aa20.68■□□□□ 0.9
ABCF3-217ENST00000489719 CALM1P0DP23 149 aa20.68■□□□□ 0.9
ABCF3-217ENST00000489719 CALM2P0DP24 149 aa20.68■□□□□ 0.9
ABCF3-217ENST00000489719 CALM3P0DP25 149 aa20.68■□□□□ 0.9
ABCF3-217ENST00000489719 EDNRBP24530 442 aa20.68■□□□□ 0.9
ABCF3-217ENST00000489719 TMEM63BQ5T3F8 832 aa20.68■□□□□ 0.9
ABCF3-217ENST00000489719 SYNE3Q6ZMZ3 975 aa20.68■□□□□ 0.9
ABCF3-217ENST00000489719 ANKRD33Q7Z3H0 272 aa20.68■□□□□ 0.9
ABCF3-217ENST00000489719 SAMD3Q8N6K7 520 aa20.68■□□□□ 0.9
ABCF3-217ENST00000489719 SCFD2Q8WU76 684 aa20.68■□□□□ 0.9
ABCF3-217ENST00000489719 PDLIM7Q9NR12 457 aa20.68■□□□□ 0.9
ABCF3-217ENST00000489719 TMEM39AQ9NV64 488 aa20.68■□□□□ 0.9
ABCF3-217ENST00000489719 A0A0U1RQG5 324 aaPredicted RBP20.67■□□□□ 0.9
ABCF3-217ENST00000489719 NKRFO15226 690 aaKnown RBP eCLIP20.67■□□□□ 0.9
ABCF3-217ENST00000489719 CYTH3O43739 400 aa20.67■□□□□ 0.9
ABCF3-217ENST00000489719 PPP1R11O60927 126 aaPredicted RBP20.67■□□□□ 0.9
ABCF3-217ENST00000489719 STXBP2Q15833 593 aa20.67■□□□□ 0.9
ABCF3-217ENST00000489719 BRDTQ58F21 947 aaPredicted RBP20.67■□□□□ 0.9
ABCF3-217ENST00000489719 SH3RF1Q7Z6J0 888 aa20.67■□□□□ 0.9
ABCF3-217ENST00000489719 TDHQ8IZJ6 230 aa20.67■□□□□ 0.9
ABCF3-217ENST00000489719 PIBF1Q8WXW3 757 aa20.67■□□□□ 0.9
ABCF3-217ENST00000489719 MYL10Q9BUA6 226 aa20.67■□□□□ 0.9
ABCF3-217ENST00000489719 PCDH10Q9P2E7 1040 aa20.67■□□□□ 0.9
ABCF3-217ENST00000489719 SLC12A7Q9Y666 1083 aa20.67■□□□□ 0.9
ABCF3-217ENST00000489719 MROH7Q68CQ1 1323 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms