RNA–Protein interactions for RNA: ENST00000489583.1

APTX-229, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 397 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-229ENST00000489583 TCP11L1Q9NUJ3 509 aa22.86■■□□□ 1.25
APTX-229ENST00000489583 ZBBXA8MT70 800 aa22.85■■□□□ 1.25
APTX-229ENST00000489583 MYL3P08590 195 aa22.85■■□□□ 1.25
APTX-229ENST00000489583 RRP1P56182 461 aaKnown RBP22.85■■□□□ 1.25
APTX-229ENST00000489583 TJAP1Q5JTD0 557 aa22.85■■□□□ 1.25
APTX-229ENST00000489583 TTBK2Q6IQ55 1244 aa22.85■■□□□ 1.25
APTX-229ENST00000489583 OTOP2Q7RTS6 562 aa22.85■■□□□ 1.25
APTX-229ENST00000489583 OR6J1Q8NGC5 347 aa22.85■■□□□ 1.25
APTX-229ENST00000489583 RILPL2Q969X0 211 aa22.85■■□□□ 1.25
APTX-229ENST00000489583 TRPV6Q9H1D0 765 aa22.85■■□□□ 1.25
APTX-229ENST00000489583 TSPYL2Q9H2G4 693 aaPredicted RBP22.85■■□□□ 1.25
APTX-229ENST00000489583 SLC4A7Q9Y6M7 1214 aa22.85■■□□□ 1.25
APTX-229ENST00000489583 GRXCR1A8MXD5 290 aa22.84■■□□□ 1.25
APTX-229ENST00000489583 NKRFO15226 690 aaKnown RBP eCLIP22.84■■□□□ 1.25
APTX-229ENST00000489583 B4GALT4O60513 344 aa22.84■■□□□ 1.25
APTX-229ENST00000489583 IGFBP4P22692 258 aa22.84■■□□□ 1.25
APTX-229ENST00000489583 PBX2P40425 430 aa22.84■■□□□ 1.25
APTX-229ENST00000489583 PSMC6P62333 389 aa22.84■■□□□ 1.25
APTX-229ENST00000489583 PPP2R5BQ15173 497 aa22.84■■□□□ 1.25
APTX-229ENST00000489583 FAM47CQ5HY64 1035 aa22.84■■□□□ 1.25
APTX-229ENST00000489583 RASIP1Q5U651 963 aa22.84■■□□□ 1.25
APTX-229ENST00000489583 MORC4Q8TE76 937 aa22.84■■□□□ 1.25
APTX-229ENST00000489583 PRDM12Q9H4Q4 367 aa22.84■■□□□ 1.25
APTX-229ENST00000489583 KPNA6O60684 536 aa22.83■■□□□ 1.25
APTX-229ENST00000489583 PFKMP08237 780 aa22.83■■□□□ 1.25
APTX-229ENST00000489583 FGRP09769 529 aa22.83■■□□□ 1.25
APTX-229ENST00000489583 HSPD1P10809 573 aaKnown RBP22.83■■□□□ 1.25
APTX-229ENST00000489583 ACTN1P12814 892 aa22.83■■□□□ 1.25
APTX-229ENST00000489583 CCDC178Q5BJE1 867 aa22.83■■□□□ 1.25
APTX-229ENST00000489583 RASGRP2Q7LDG7 609 aa22.83■■□□□ 1.25
APTX-229ENST00000489583 ESR2Q92731 530 aa22.83■■□□□ 1.25
APTX-229ENST00000489583 FAM227BQ96M60 508 aa22.83■■□□□ 1.25
APTX-229ENST00000489583 MTG1Q9BT17 334 aaPredicted RBP22.83■■□□□ 1.25
APTX-229ENST00000489583 NOC4LQ9BVI4 516 aaKnown RBP22.83■■□□□ 1.25
APTX-229ENST00000489583 ALDH8A1Q9H2A2 487 aaPredicted RBP22.83■■□□□ 1.25
APTX-229ENST00000489583 NOD1Q9Y239 953 aa22.83■■□□□ 1.25
APTX-229ENST00000489583 ZMYM6O95789 1325 aa22.82■■□□□ 1.24
APTX-229ENST00000489583 NFIBO00712 420 aa22.82■■□□□ 1.24
APTX-229ENST00000489583 FOXP2O15409 715 aa22.82■■□□□ 1.24
APTX-229ENST00000489583 NOVP48745 357 aa22.82■■□□□ 1.24
APTX-229ENST00000489583 HAND2P61296 217 aa22.82■■□□□ 1.24
APTX-229ENST00000489583 AKNAD1Q5T1N1 836 aa22.82■■□□□ 1.24
APTX-229ENST00000489583 GPATCH4Q5T3I0 446 aaKnown RBP22.82■■□□□ 1.24
APTX-229ENST00000489583 RETREG2Q8NC44 543 aa22.82■■□□□ 1.24
APTX-229ENST00000489583 DNERQ8NFT8 737 aa22.82■■□□□ 1.24
APTX-229ENST00000489583 SCFD2Q8WU76 684 aa22.82■■□□□ 1.24
APTX-229ENST00000489583 DDX49Q9Y6V7 483 aaKnown RBP22.82■■□□□ 1.24
APTX-229ENST00000489583 CCDC171Q6TFL3 1326 aa22.82■■□□□ 1.24
APTX-229ENST00000489583 SALL3Q9BXA9 1300 aa22.82■■□□□ 1.24
APTX-229ENST00000489583 A0A0D9SFI3 127 aa22.81■■□□□ 1.24
APTX-229ENST00000489583 PDHBP11177 359 aa22.81■■□□□ 1.24
APTX-229ENST00000489583 NT5C2P49902 561 aa22.81■■□□□ 1.24
APTX-229ENST00000489583 HDAC1Q13547 482 aaPredicted RBP22.81■■□□□ 1.24
APTX-229ENST00000489583 IQCA1Q86XH1 822 aa22.81■■□□□ 1.24
APTX-229ENST00000489583 PURBQ96QR8 312 aaKnown RBP22.81■■□□□ 1.24
APTX-229ENST00000489583 NKX2-4Q9H2Z4 354 aa22.81■■□□□ 1.24
APTX-229ENST00000489583 EYSQ5T1H1 3165 aa22.81■■□□□ 1.24
APTX-229ENST00000489583 ZNF213O14771 459 aa22.8■■□□□ 1.24
APTX-229ENST00000489583 ZNF543Q08ER8 600 aa22.8■■□□□ 1.24
APTX-229ENST00000489583 NMIQ13287 307 aaPredicted RBP22.8■■□□□ 1.24
APTX-229ENST00000489583 PPP2R2DQ66LE6 453 aa22.8■■□□□ 1.24
APTX-229ENST00000489583 TNKSO95271 1327 aa22.8■■□□□ 1.24
APTX-229ENST00000489583 WDR19Q8NEZ3 1342 aa22.8■■□□□ 1.24
APTX-229ENST00000489583 RPS6P62753 249 aaKnown RBP22.79■■□□□ 1.24
APTX-229ENST00000489583 PURAQ00577 322 aaKnown RBP22.79■■□□□ 1.24
APTX-229ENST00000489583 AAMPQ13685 434 aa22.79■■□□□ 1.24
APTX-229ENST00000489583 TTLL4Q14679 1199 aa22.79■■□□□ 1.24
APTX-229ENST00000489583 SLC30A10Q6XR72 485 aa22.79■■□□□ 1.24
APTX-229ENST00000489583 ATXN2LQ8WWM7 1075 aaKnown RBP22.79■■□□□ 1.24
APTX-229ENST00000489583 CRBNQ96SW2 442 aa22.79■■□□□ 1.24
APTX-229ENST00000489583 RWDD1Q9H446 243 aaPredicted RBP22.79■■□□□ 1.24
APTX-229ENST00000489583 CXXC1Q9P0U4 656 aaPredicted RBP22.79■■□□□ 1.24
APTX-229ENST00000489583 THEGQ9P2T0 379 aa22.79■■□□□ 1.24
APTX-229ENST00000489583 GRIN2DO15399 1336 aa22.79■■□□□ 1.24
APTX-229ENST00000489583 UMODL1Q5DID0 1318 aa22.79■■□□□ 1.24
APTX-229ENST00000489583 DHX16O60231 1041 aaKnown RBP22.78■■□□□ 1.24
APTX-229ENST00000489583 TXNP10599 105 aaKnown RBP22.78■■□□□ 1.24
APTX-229ENST00000489583 ATP2A2P16615 1042 aaKnown RBP22.78■■□□□ 1.24
APTX-229ENST00000489583 CHMP4BP1P59074 171 aa22.78■■□□□ 1.24
APTX-229ENST00000489583 USH1GQ495M9 461 aa22.78■■□□□ 1.24
APTX-229ENST00000489583 SCLYQ96I15 445 aa22.78■■□□□ 1.24
APTX-229ENST00000489583 LNPKQ9C0E8 428 aa22.78■■□□□ 1.24
APTX-229ENST00000489583 KAT14Q9H8E8 782 aa22.78■■□□□ 1.24
APTX-229ENST00000489583 TRMT13Q9NUP7 481 aaKnown RBP22.78■■□□□ 1.24
APTX-229ENST00000489583 RBM47A0AV96 593 aaKnown RBP22.77■■□□□ 1.24
APTX-229ENST00000489583 PTGS1P23219 599 aa22.77■■□□□ 1.24
APTX-229ENST00000489583 RFC2P35250 354 aa22.77■■□□□ 1.24
APTX-229ENST00000489583 BFSP2Q13515 415 aa22.77■■□□□ 1.24
APTX-229ENST00000489583 CCDC85BQ15834 202 aaPredicted RBP22.77■■□□□ 1.24
APTX-229ENST00000489583 DEFB128Q7Z7B8 93 aa22.77■■□□□ 1.24
APTX-229ENST00000489583 CCDC155Q8N6L0 562 aa22.77■■□□□ 1.24
APTX-229ENST00000489583 FTOQ9C0B1 505 aaKnown RBP eCLIP22.77■■□□□ 1.24
APTX-229ENST00000489583 DIAPH3Q9NSV4 1193 aa22.77■■□□□ 1.24
APTX-229ENST00000489583 PCDHA11Q9Y5I1 949 aa22.77■■□□□ 1.24
APTX-229ENST00000489583 CDH23Q9H251 3354 aa22.76■■□□□ 1.23
APTX-229ENST00000489583 HIP1O00291 1037 aa22.76■■□□□ 1.23
APTX-229ENST00000489583 CYP2C9P11712 490 aa22.76■■□□□ 1.23
APTX-229ENST00000489583 NBPF20Q3BBV1 942 aa22.76■■□□□ 1.23
APTX-229ENST00000489583 TMEM63BQ5T3F8 832 aa22.76■■□□□ 1.23
APTX-229ENST00000489583 NFRKBQ6P4R8 1299 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms