RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 LCTP09848 1927 aa9.11□□□□□ -0.95
SSR1-210ENST00000489567 PTPDC1A2A3K4 754 aa9.11□□□□□ -0.95
SSR1-210ENST00000489567 SMARCA1P28370 1054 aa9.11□□□□□ -0.95
SSR1-210ENST00000489567 CCND3P30281 292 aaPredicted RBP9.11□□□□□ -0.95
SSR1-210ENST00000489567 RBM25P49756 843 aaKnown RBP9.11□□□□□ -0.95
SSR1-210ENST00000489567 RCAN1P53805 252 aa9.11□□□□□ -0.95
SSR1-210ENST00000489567 AK2P54819 239 aa9.11□□□□□ -0.95
SSR1-210ENST00000489567 RPS6P62753 249 aaKnown RBP9.11□□□□□ -0.95
SSR1-210ENST00000489567 UBXN2AP68543 259 aa9.11□□□□□ -0.95
SSR1-210ENST00000489567 CCT2P78371 535 aaKnown RBP9.11□□□□□ -0.95
SSR1-210ENST00000489567 LZTS2Q9BRK4 669 aa9.11□□□□□ -0.95
SSR1-210ENST00000489567 RNF208Q9H0X6 261 aa9.11□□□□□ -0.95
SSR1-210ENST00000489567 RBM28Q9NW13 759 aaKnown RBP9.11□□□□□ -0.95
SSR1-210ENST00000489567 COL20A1Q9P218 1284 aa9.11□□□□□ -0.95
SSR1-210ENST00000489567 TPCN1Q9ULQ1 816 aa9.11□□□□□ -0.95
SSR1-210ENST00000489567 DIS3Q9Y2L1 958 aaKnown RBP9.11□□□□□ -0.95
SSR1-210ENST00000489567 PCDHA1Q9Y5I3 950 aa9.11□□□□□ -0.95
SSR1-210ENST00000489567 NID2Q14112 1375 aa9.11□□□□□ -0.95
SSR1-210ENST00000489567 PFASO15067 1338 aa9.1□□□□□ -0.95
SSR1-210ENST00000489567 ABCB11O95342 1321 aa9.1□□□□□ -0.95
SSR1-210ENST00000489567 PLXNA1Q9UIW2 1896 aa9.1□□□□□ -0.95
SSR1-210ENST00000489567 POTEB2H3BUK9 544 aa9.1□□□□□ -0.95
SSR1-210ENST00000489567 DTNBO60941 627 aa9.1□□□□□ -0.95
SSR1-210ENST00000489567 SNAI1O95863 264 aaPredicted RBP9.1□□□□□ -0.95
SSR1-210ENST00000489567 CALML3P27482 149 aa9.1□□□□□ -0.95
SSR1-210ENST00000489567 NEK4P51957 841 aa9.1□□□□□ -0.95
SSR1-210ENST00000489567 NTRK3Q16288 839 aa9.1□□□□□ -0.95
SSR1-210ENST00000489567 RNF207Q6ZRF8 634 aa9.1□□□□□ -0.95
SSR1-210ENST00000489567 TRMT44Q8IYL2 757 aaKnown RBP9.1□□□□□ -0.95
SSR1-210ENST00000489567 RRP36Q96EU6 259 aaKnown RBP9.1□□□□□ -0.95
SSR1-210ENST00000489567 TINF2Q9BSI4 451 aa9.1□□□□□ -0.95
SSR1-210ENST00000489567 BACH2Q9BYV9 841 aa9.1□□□□□ -0.95
SSR1-210ENST00000489567 ALDH8A1Q9H2A2 487 aaPredicted RBP9.1□□□□□ -0.95
SSR1-210ENST00000489567 PAK6Q9NQU5 681 aaPredicted RBP9.1□□□□□ -0.95
SSR1-210ENST00000489567 SLC5A4Q9NY91 659 aa9.1□□□□□ -0.95
SSR1-210ENST00000489567 RPTORQ8N122 1335 aa9.1□□□□□ -0.95
SSR1-210ENST00000489567 MYH6P13533 1939 aa9.09□□□□□ -0.95
SSR1-210ENST00000489567 LARGE1O95461 756 aa9.09□□□□□ -0.95
SSR1-210ENST00000489567 CYBAP13498 195 aa9.09□□□□□ -0.95
SSR1-210ENST00000489567 EN2P19622 333 aaPredicted RBP9.09□□□□□ -0.95
SSR1-210ENST00000489567 STK3Q13188 491 aa9.09□□□□□ -0.95
SSR1-210ENST00000489567 MFSD14CQ5VZR4 134 aa9.09□□□□□ -0.95
SSR1-210ENST00000489567 MAMDC4Q6UXC1 1216 aa9.09□□□□□ -0.95
SSR1-210ENST00000489567 NOL8Q76FK4 1167 aaKnown RBP9.09□□□□□ -0.95
SSR1-210ENST00000489567 SHISA4Q96DD7 197 aa9.09□□□□□ -0.95
SSR1-210ENST00000489567 ZNF274Q96GC6 653 aaPredicted RBP9.09□□□□□ -0.95
SSR1-210ENST00000489567 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.09□□□□□ -0.952e-9■■■■■ 37.6
SSR1-210ENST00000489567 HMX1Q9NP08 348 aaPredicted RBP9.09□□□□□ -0.95
SSR1-210ENST00000489567 PNMA2Q9UL42 364 aa9.09□□□□□ -0.95
SSR1-210ENST00000489567 MRPL11Q9Y3B7 192 aaKnown RBP9.09□□□□□ -0.95
SSR1-210ENST00000489567 V9GY48 417 aaPredicted RBP9.09□□□□□ -0.95
SSR1-210ENST00000489567 CFBP00751 764 aa9.08□□□□□ -0.96
SSR1-210ENST00000489567 HOXA13P31271 388 aaPredicted RBP9.08□□□□□ -0.96
SSR1-210ENST00000489567 TYW1BQ6NUM6 668 aa9.08□□□□□ -0.96
SSR1-210ENST00000489567 ZNF467Q7Z7K2 595 aaPredicted RBP9.08□□□□□ -0.96
SSR1-210ENST00000489567 RGS22Q8NE09 1264 aa9.08□□□□□ -0.96
SSR1-210ENST00000489567 SYTL5Q8TDW5 730 aaPredicted RBP9.08□□□□□ -0.96
SSR1-210ENST00000489567 GPKOWQ92917 476 aaPredicted RBP eCLIP9.08□□□□□ -0.962e-15■□□□□ 9.4
SSR1-210ENST00000489567 PHKBQ93100 1093 aa9.08□□□□□ -0.96
SSR1-210ENST00000489567 DEFB118Q96PH6 123 aa9.08□□□□□ -0.96
SSR1-210ENST00000489567 SEC63Q9UGP8 760 aaKnown RBP9.08□□□□□ -0.96
SSR1-210ENST00000489567 GJB1P08034 283 aa9.08□□□□□ -0.96
SSR1-210ENST00000489567 ZNF865P0CJ78 1059 aaPredicted RBP9.08□□□□□ -0.96
SSR1-210ENST00000489567 ALDH5A1P51649 535 aaPredicted RBP9.08□□□□□ -0.96
SSR1-210ENST00000489567 HSD17B4P51659 736 aa9.08□□□□□ -0.96
SSR1-210ENST00000489567 GHRHRQ02643 423 aa9.08□□□□□ -0.96
SSR1-210ENST00000489567 SCRN1Q12765 414 aa9.08□□□□□ -0.96
SSR1-210ENST00000489567 PKN1Q16512 942 aa9.08□□□□□ -0.96
SSR1-210ENST00000489567 ME3Q16798 604 aa9.08□□□□□ -0.96
SSR1-210ENST00000489567 ANO1Q5XXA6 986 aa9.08□□□□□ -0.96
SSR1-210ENST00000489567 LHX8Q68G74 356 aa9.08□□□□□ -0.96
SSR1-210ENST00000489567 WWC2Q6AWC2 1192 aa9.08□□□□□ -0.96
SSR1-210ENST00000489567 ARMCX2Q7L311 632 aa9.08□□□□□ -0.96
SSR1-210ENST00000489567 U2AF1L4Q8WU68 220 aaKnown RBP9.08□□□□□ -0.96
SSR1-210ENST00000489567 TBC1D32Q96NH3 1257 aa9.08□□□□□ -0.96
SSR1-210ENST00000489567 TAAR1Q96RJ0 339 aa9.08□□□□□ -0.96
SSR1-210ENST00000489567 TMEM106CQ9BVX2 250 aa9.08□□□□□ -0.96
SSR1-210ENST00000489567 KATNBL1Q9H079 304 aa9.08□□□□□ -0.96
SSR1-210ENST00000489567 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.08□□□□□ -0.96
SSR1-210ENST00000489567 SYNGAP1Q96PV0 1343 aa9.08□□□□□ -0.96
SSR1-210ENST00000489567 CCDC196A0A1B0GTZ2 297 aa9.07□□□□□ -0.96
SSR1-210ENST00000489567 ADCY6O43306 1168 aa9.07□□□□□ -0.96
SSR1-210ENST00000489567 CNGA1P29973 690 aa9.07□□□□□ -0.96
SSR1-210ENST00000489567 GJA8P48165 433 aa9.07□□□□□ -0.96
SSR1-210ENST00000489567 PPP2R5BQ15173 497 aa9.07□□□□□ -0.96
SSR1-210ENST00000489567 IFFO2Q5TF58 517 aa9.07□□□□□ -0.96
SSR1-210ENST00000489567 HEATR3Q7Z4Q2 680 aa9.07□□□□□ -0.96
SSR1-210ENST00000489567 MCF2L2Q86YR7 1114 aa9.07□□□□□ -0.96
SSR1-210ENST00000489567 MSL3Q8N5Y2 521 aaKnown RBP9.07□□□□□ -0.96
SSR1-210ENST00000489567 NECAB1Q8N987 351 aa9.07□□□□□ -0.96
SSR1-210ENST00000489567 LENG1Q96BZ8 264 aaPredicted RBP9.07□□□□□ -0.96
SSR1-210ENST00000489567 MCM3APO60318 1980 aa9.07□□□□□ -0.96
SSR1-210ENST00000489567 RBBP6Q7Z6E9 1792 aaKnown RBP9.07□□□□□ -0.96
SSR1-210ENST00000489567 STXBP3O00186 592 aa9.06□□□□□ -0.96
SSR1-210ENST00000489567 ADAMTS3O15072 1205 aa9.06□□□□□ -0.96
SSR1-210ENST00000489567 PFKFB2O60825 505 aa9.06□□□□□ -0.96
SSR1-210ENST00000489567 SGPL1O95470 568 aa9.06□□□□□ -0.96
SSR1-210ENST00000489567 IFNAR1P17181 557 aa9.06□□□□□ -0.96
SSR1-210ENST00000489567 PTGS1P23219 599 aa9.06□□□□□ -0.96
SSR1-210ENST00000489567 ST3GAL1Q11201 340 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms