RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 OTOP2Q7RTS6 562 aa14.04□□□□□ -0.16
SFXN3-207ENST00000489434 MORC4Q8TE76 937 aa14.04□□□□□ -0.16
SFXN3-207ENST00000489434 WDR11Q9BZH6 1224 aa14.04□□□□□ -0.16
SFXN3-207ENST00000489434 PRDM12Q9H4Q4 367 aa14.04□□□□□ -0.16
SFXN3-207ENST00000489434 GPCPD1Q9NPB8 672 aa14.04□□□□□ -0.16
SFXN3-207ENST00000489434 SLC4A7Q9Y6M7 1214 aa14.04□□□□□ -0.16
SFXN3-207ENST00000489434 DDX49Q9Y6V7 483 aaKnown RBP14.04□□□□□ -0.16
SFXN3-207ENST00000489434 LRRC37A2A6NM11 1700 aa14.04□□□□□ -0.16
SFXN3-207ENST00000489434 FGAP02671 866 aa14.03□□□□□ -0.16
SFXN3-207ENST00000489434 PFKMP08237 780 aa14.03□□□□□ -0.16
SFXN3-207ENST00000489434 ALDH5A1P51649 535 aaPredicted RBP14.03□□□□□ -0.16
SFXN3-207ENST00000489434 PDE1AP54750 535 aa14.03□□□□□ -0.16
SFXN3-207ENST00000489434 MFAP1P55081 439 aaKnown RBP14.03□□□□□ -0.16
SFXN3-207ENST00000489434 CCL23P55773 120 aa14.03□□□□□ -0.16
SFXN3-207ENST00000489434 PSMC6P62333 389 aa14.03□□□□□ -0.16
SFXN3-207ENST00000489434 PDE4DQ08499 809 aa14.03□□□□□ -0.16
SFXN3-207ENST00000489434 TTBK2Q6IQ55 1244 aa14.03□□□□□ -0.16
SFXN3-207ENST00000489434 RASGRP2Q7LDG7 609 aa14.03□□□□□ -0.16
SFXN3-207ENST00000489434 USP38Q8NB14 1042 aa14.03□□□□□ -0.16
SFXN3-207ENST00000489434 PPM1EQ8WY54 764 aa14.03□□□□□ -0.16
SFXN3-207ENST00000489434 TMEM47Q9BQJ4 181 aa14.03□□□□□ -0.16
SFXN3-207ENST00000489434 ALDH8A1Q9H2A2 487 aaPredicted RBP14.03□□□□□ -0.16
SFXN3-207ENST00000489434 TCP11L1Q9NUJ3 509 aa14.03□□□□□ -0.16
SFXN3-207ENST00000489434 CXXC1Q9P0U4 656 aaPredicted RBP14.03□□□□□ -0.16
SFXN3-207ENST00000489434 GRIN2DO15399 1336 aa14.03□□□□□ -0.16
SFXN3-207ENST00000489434 SPTBN5Q9NRC6 3674 aaKnown RBP14.02□□□□□ -0.16
SFXN3-207ENST00000489434 CHD7Q9P2D1 2997 aa14.02□□□□□ -0.16
SFXN3-207ENST00000489434 BDP1A6H8Y1 2624 aa14.02□□□□□ -0.16
SFXN3-207ENST00000489434 FRMPD2Q68DX3 1309 aaPredicted RBP14.02□□□□□ -0.17
SFXN3-207ENST00000489434 SALL3Q9BXA9 1300 aa14.02□□□□□ -0.17
SFXN3-207ENST00000489434 ZBBXA8MT70 800 aa14.02□□□□□ -0.17
SFXN3-207ENST00000489434 NFIBO00712 420 aa14.02□□□□□ -0.17
SFXN3-207ENST00000489434 KPNA6O60684 536 aa14.02□□□□□ -0.17
SFXN3-207ENST00000489434 MYL3P08590 195 aa14.02□□□□□ -0.17
SFXN3-207ENST00000489434 IGFBP4P22692 258 aa14.02□□□□□ -0.17
SFXN3-207ENST00000489434 CALML3P27482 149 aa14.02□□□□□ -0.17
SFXN3-207ENST00000489434 RNF207Q6ZRF8 634 aa14.02□□□□□ -0.17
SFXN3-207ENST00000489434 MFSD6Q6ZSS7 791 aa14.02□□□□□ -0.17
SFXN3-207ENST00000489434 IL27Q8NEV9 243 aa14.02□□□□□ -0.17
SFXN3-207ENST00000489434 OR6J1Q8NGC5 347 aa14.02□□□□□ -0.17
SFXN3-207ENST00000489434 SCFD2Q8WU76 684 aa14.02□□□□□ -0.17
SFXN3-207ENST00000489434 ATXN2LQ8WWM7 1075 aaKnown RBP14.02□□□□□ -0.17
SFXN3-207ENST00000489434 TTC14Q96N46 770 aa14.02□□□□□ -0.17
SFXN3-207ENST00000489434 PURBQ96QR8 312 aaKnown RBP14.02□□□□□ -0.17
SFXN3-207ENST00000489434 MTG1Q9BT17 334 aaPredicted RBP14.02□□□□□ -0.17
SFXN3-207ENST00000489434 TSPYL2Q9H2G4 693 aaPredicted RBP14.02□□□□□ -0.17
SFXN3-207ENST00000489434 RNF41Q9H4P4 317 aaPredicted RBP14.02□□□□□ -0.17
SFXN3-207ENST00000489434 PRDM6Q9NQX0 595 aa14.02□□□□□ -0.17
SFXN3-207ENST00000489434 TNKSO95271 1327 aa14.01□□□□□ -0.17
SFXN3-207ENST00000489434 ZMYM6O95789 1325 aa14.01□□□□□ -0.17
SFXN3-207ENST00000489434 UMODL1Q5DID0 1318 aa14.01□□□□□ -0.17
SFXN3-207ENST00000489434 NKRFO15226 690 aaKnown RBP eCLIP14.01□□□□□ -0.17
SFXN3-207ENST00000489434 ACTN1P12814 892 aa14.01□□□□□ -0.17
SFXN3-207ENST00000489434 PTGS1P23219 599 aa14.01□□□□□ -0.17
SFXN3-207ENST00000489434 PPP2R5BQ15173 497 aa14.01□□□□□ -0.17
SFXN3-207ENST00000489434 FAM47CQ5HY64 1035 aa14.01□□□□□ -0.17
SFXN3-207ENST00000489434 DNERQ8NFT8 737 aa14.01□□□□□ -0.17
SFXN3-207ENST00000489434 FAM227BQ96M60 508 aa14.01□□□□□ -0.17
SFXN3-207ENST00000489434 WNT8AQ9H1J5 351 aa14.01□□□□□ -0.17
SFXN3-207ENST00000489434 NKX2-4Q9H2Z4 354 aa14.01□□□□□ -0.17
SFXN3-207ENST00000489434 THEGQ9P2T0 379 aa14.01□□□□□ -0.17
SFXN3-207ENST00000489434 LCTP09848 1927 aa14.01□□□□□ -0.17
SFXN3-207ENST00000489434 TRANK1O15050 2925 aa14.01□□□□□ -0.17
SFXN3-207ENST00000489434 WDR19Q8NEZ3 1342 aa14□□□□□ -0.17
SFXN3-207ENST00000489434 A0A0D9SFI3 127 aa14□□□□□ -0.17
SFXN3-207ENST00000489434 RBM47A0AV96 593 aaKnown RBP14□□□□□ -0.17
SFXN3-207ENST00000489434 TRIM6-TRIM34B2RNG4 842 aa14□□□□□ -0.17
SFXN3-207ENST00000489434 HSPD1P10809 573 aaKnown RBP14□□□□□ -0.17
SFXN3-207ENST00000489434 PDHBP11177 359 aa14□□□□□ -0.17
SFXN3-207ENST00000489434 ATP2A2P16615 1042 aaKnown RBP14□□□□□ -0.17
SFXN3-207ENST00000489434 HAND2P61296 217 aa14□□□□□ -0.17
SFXN3-207ENST00000489434 RPS6P62753 249 aaKnown RBP14□□□□□ -0.17
SFXN3-207ENST00000489434 PURAQ00577 322 aaKnown RBP14□□□□□ -0.17
SFXN3-207ENST00000489434 ZNF543Q08ER8 600 aa14□□□□□ -0.17
SFXN3-207ENST00000489434 TMEM63BQ5T3F8 832 aa14□□□□□ -0.17
SFXN3-207ENST00000489434 GPATCH4Q5T3I0 446 aaKnown RBP14□□□□□ -0.17
SFXN3-207ENST00000489434 PPP2R2DQ66LE6 453 aa14□□□□□ -0.17
SFXN3-207ENST00000489434 RETREG2Q8NC44 543 aa14□□□□□ -0.17
SFXN3-207ENST00000489434 ESR2Q92731 530 aa14□□□□□ -0.17
SFXN3-207ENST00000489434 TRMT13Q9NUP7 481 aaKnown RBP14□□□□□ -0.17
SFXN3-207ENST00000489434 PCDHA11Q9Y5I1 949 aa14□□□□□ -0.17
SFXN3-207ENST00000489434 GBF1Q92538 1859 aa13.99□□□□□ -0.17
SFXN3-207ENST00000489434 CCDC171Q6TFL3 1326 aa13.99□□□□□ -0.17
SFXN3-207ENST00000489434 TNFRSF10AO00220 468 aa13.99□□□□□ -0.17
SFXN3-207ENST00000489434 CYP2C9P11712 490 aa13.99□□□□□ -0.17
SFXN3-207ENST00000489434 RFC2P35250 354 aa13.99□□□□□ -0.17
SFXN3-207ENST00000489434 NT5C2P49902 561 aa13.99□□□□□ -0.17
SFXN3-207ENST00000489434 RRP1P56182 461 aaKnown RBP13.99□□□□□ -0.17
SFXN3-207ENST00000489434 MRPS5P82675 430 aaKnown RBP13.99□□□□□ -0.17
SFXN3-207ENST00000489434 NMIQ13287 307 aaPredicted RBP13.99□□□□□ -0.17
SFXN3-207ENST00000489434 HDAC1Q13547 482 aaPredicted RBP13.99□□□□□ -0.17
SFXN3-207ENST00000489434 CCDC85BQ15834 202 aaPredicted RBP13.99□□□□□ -0.17
SFXN3-207ENST00000489434 CCDC178Q5BJE1 867 aa13.99□□□□□ -0.17
SFXN3-207ENST00000489434 NFRKBQ6P4R8 1299 aa13.99□□□□□ -0.17
SFXN3-207ENST00000489434 SLC30A10Q6XR72 485 aa13.99□□□□□ -0.17
SFXN3-207ENST00000489434 CLEC4DQ8WXI8 215 aa13.99□□□□□ -0.17
SFXN3-207ENST00000489434 SCLYQ96I15 445 aa13.99□□□□□ -0.17
SFXN3-207ENST00000489434 NOD1Q9Y239 953 aa13.99□□□□□ -0.17
SFXN3-207ENST00000489434 YBX2Q9Y2T7 364 aaKnown RBP13.99□□□□□ -0.17
SFXN3-207ENST00000489434 A6NJR5 290 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms