RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 GHRHRQ02643 423 aa22.1■■□□□ 1.13
MRPL55-230ENST00000489430 TAPT1Q6NXT6 567 aa22.1■■□□□ 1.13
MRPL55-230ENST00000489430 CHST3Q7LGC8 479 aa22.1■■□□□ 1.13
MRPL55-230ENST00000489430 LENG1Q96BZ8 264 aaPredicted RBP22.1■■□□□ 1.13
MRPL55-230ENST00000489430 VAT1LQ9HCJ6 419 aa22.1■■□□□ 1.13
MRPL55-230ENST00000489430 RBM27Q9P2N5 1060 aaKnown RBP22.1■■□□□ 1.13
MRPL55-230ENST00000489430 GNEQ9Y223 722 aaKnown RBP22.1■■□□□ 1.13
MRPL55-230ENST00000489430 A0A1W2PQ45 241 aaPredicted RBP22.09■■□□□ 1.13
MRPL55-230ENST00000489430 A0A1W2PQY0 241 aa22.09■■□□□ 1.13
MRPL55-230ENST00000489430 ADCY6O43306 1168 aa22.09■■□□□ 1.13
MRPL55-230ENST00000489430 C6orf222P0C671 652 aaPredicted RBP22.09■■□□□ 1.13
MRPL55-230ENST00000489430 KIF5BP33176 963 aa22.09■■□□□ 1.13
MRPL55-230ENST00000489430 ACLYP53396 1101 aa22.09■■□□□ 1.13
MRPL55-230ENST00000489430 LZTS2Q9BRK4 669 aa22.09■■□□□ 1.13
MRPL55-230ENST00000489430 SENP2Q9HC62 589 aa22.09■■□□□ 1.13
MRPL55-230ENST00000489430 ZMYND8Q9ULU4 1186 aaPredicted RBP22.09■■□□□ 1.13
MRPL55-230ENST00000489430 RANBP2P49792 3224 aaKnown RBP22.08■■□□□ 1.13
MRPL55-230ENST00000489430 ELP1O95163 1332 aa22.08■■□□□ 1.13
MRPL55-230ENST00000489430 RBM47A0AV96 593 aaKnown RBP22.08■■□□□ 1.13
MRPL55-230ENST00000489430 KRT32Q14532 448 aa22.08■■□□□ 1.13
MRPL55-230ENST00000489430 KCNA10Q16322 511 aa22.08■■□□□ 1.13
MRPL55-230ENST00000489430 PURBQ96QR8 312 aaKnown RBP22.08■■□□□ 1.13
MRPL55-230ENST00000489430 PRKAG2Q9UGJ0 569 aa22.08■■□□□ 1.13
MRPL55-230ENST00000489430 ALPK3Q96L96 1907 aa22.08■■□□□ 1.12
MRPL55-230ENST00000489430 SH2B2O14492 632 aaPredicted RBP22.07■■□□□ 1.12
MRPL55-230ENST00000489430 SLC34A2O95436 690 aa22.07■■□□□ 1.12
MRPL55-230ENST00000489430 CALM1P0DP23 149 aa22.07■■□□□ 1.12
MRPL55-230ENST00000489430 CALM2P0DP24 149 aa22.07■■□□□ 1.12
MRPL55-230ENST00000489430 CALM3P0DP25 149 aa22.07■■□□□ 1.12
MRPL55-230ENST00000489430 GNAQP50148 359 aa22.07■■□□□ 1.12
MRPL55-230ENST00000489430 PDE4DQ08499 809 aa22.07■■□□□ 1.12
MRPL55-230ENST00000489430 DUSP28Q4G0W2 176 aa22.07■■□□□ 1.12
MRPL55-230ENST00000489430 GNASQ5JWF2 1037 aa22.07■■□□□ 1.12
MRPL55-230ENST00000489430 FBXO16Q8IX29 292 aaPredicted RBP22.07■■□□□ 1.12
MRPL55-230ENST00000489430 ZNF654Q8IZM8 581 aa22.07■■□□□ 1.12
MRPL55-230ENST00000489430 CTCFLQ8NI51 663 aaPredicted RBP22.07■■□□□ 1.12
MRPL55-230ENST00000489430 SYTL5Q8TDW5 730 aaPredicted RBP22.07■■□□□ 1.12
MRPL55-230ENST00000489430 NSUN6Q8TEA1 469 aaKnown RBP22.07■■□□□ 1.12
MRPL55-230ENST00000489430 FERMT2Q96AC1 680 aa22.07■■□□□ 1.12
MRPL55-230ENST00000489430 GLT1D1Q96MS3 346 aa22.07■■□□□ 1.12
MRPL55-230ENST00000489430 TOX2Q96NM4 488 aa22.07■■□□□ 1.12
MRPL55-230ENST00000489430 IWS1Q96ST2 819 aa22.07■■□□□ 1.12
MRPL55-230ENST00000489430 SMCHD1A6NHR9 2005 aa22.07■■□□□ 1.12
MRPL55-230ENST00000489430 DNAH12Q6ZR08 3092 aa22.07■■□□□ 1.12
MRPL55-230ENST00000489430 PNMA6FA0A0J9YX94 578 aa22.06■■□□□ 1.12
MRPL55-230ENST00000489430 CABYRO75952 493 aa22.06■■□□□ 1.12
MRPL55-230ENST00000489430 SMPD1P17405 629 aa22.06■■□□□ 1.12
MRPL55-230ENST00000489430 SYN1P17600 705 aa22.06■■□□□ 1.12
MRPL55-230ENST00000489430 NOL8Q76FK4 1167 aaKnown RBP22.06■■□□□ 1.12
MRPL55-230ENST00000489430 TLK2Q86UE8 772 aa22.06■■□□□ 1.12
MRPL55-230ENST00000489430 SGMS1Q86VZ5 419 aa22.06■■□□□ 1.12
MRPL55-230ENST00000489430 SPZ1Q9BXG8 430 aa22.06■■□□□ 1.12
MRPL55-230ENST00000489430 SEZ6LQ9BYH1 1024 aa22.06■■□□□ 1.12
MRPL55-230ENST00000489430 AP5M1Q9H0R1 490 aa22.06■■□□□ 1.12
MRPL55-230ENST00000489430 STARD7Q9NQZ5 370 aa22.06■■□□□ 1.12
MRPL55-230ENST00000489430 ATP11BQ9Y2G3 1177 aa22.06■■□□□ 1.12
MRPL55-230ENST00000489430 PCDHA1Q9Y5I3 950 aa22.06■■□□□ 1.12
MRPL55-230ENST00000489430 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.05■■□□□ 1.12
MRPL55-230ENST00000489430 CCDC69A6NI79 296 aa22.05■■□□□ 1.12
MRPL55-230ENST00000489430 NKRFO15226 690 aaKnown RBP eCLIP22.05■■□□□ 1.12
MRPL55-230ENST00000489430 CTAGE5O15320 804 aa22.05■■□□□ 1.12
MRPL55-230ENST00000489430 EPB41L2O43491 1005 aaKnown RBP22.05■■□□□ 1.12
MRPL55-230ENST00000489430 CYTH3O43739 400 aa22.05■■□□□ 1.12
MRPL55-230ENST00000489430 ZEB2O60315 1214 aa22.05■■□□□ 1.12
MRPL55-230ENST00000489430 CENPBP07199 599 aaPredicted RBP22.05■■□□□ 1.12
MRPL55-230ENST00000489430 ASGR1P07306 291 aa22.05■■□□□ 1.12
MRPL55-230ENST00000489430 HMGB1P09429 215 aaKnown RBP22.05■■□□□ 1.12
MRPL55-230ENST00000489430 TRIM60Q495X7 471 aa22.05■■□□□ 1.12
MRPL55-230ENST00000489430 NFXL1Q6ZNB6 911 aa22.05■■□□□ 1.12
MRPL55-230ENST00000489430 EEPD1Q7L9B9 569 aa22.05■■□□□ 1.12
MRPL55-230ENST00000489430 ANKRD33Q7Z3H0 272 aa22.05■■□□□ 1.12
MRPL55-230ENST00000489430 SCFD2Q8WU76 684 aa22.05■■□□□ 1.12
MRPL55-230ENST00000489430 NEK1Q96PY6 1258 aa22.05■■□□□ 1.12
MRPL55-230ENST00000489430 PDGFCQ9NRA1 345 aa22.05■■□□□ 1.12
MRPL55-230ENST00000489430 PPP4R2Q9NY27 417 aa22.05■■□□□ 1.12
MRPL55-230ENST00000489430 MROH7Q68CQ1 1323 aa22.05■■□□□ 1.12
MRPL55-230ENST00000489430 MYADML2A6NDP7 307 aa22.04■■□□□ 1.12
MRPL55-230ENST00000489430 MAGEA10P43363 369 aaPredicted RBP22.04■■□□□ 1.12
MRPL55-230ENST00000489430 HSD17B4P51659 736 aa22.04■■□□□ 1.12
MRPL55-230ENST00000489430 SLC35G1Q2M3R5 365 aa22.04■■□□□ 1.12
MRPL55-230ENST00000489430 PIGSQ96S52 555 aa22.04■■□□□ 1.12
MRPL55-230ENST00000489430 WDR11Q9BZH6 1224 aa22.04■■□□□ 1.12
MRPL55-230ENST00000489430 SLC12A7Q9Y666 1083 aa22.04■■□□□ 1.12
MRPL55-230ENST00000489430 PPP1R11O60927 126 aaPredicted RBP22.03■■□□□ 1.12
MRPL55-230ENST00000489430 REC8O95072 547 aa22.03■■□□□ 1.12
MRPL55-230ENST00000489430 FXR1P51114 621 aaKnown RBP eCLIP22.03■■□□□ 1.12
MRPL55-230ENST00000489430 FSCN1Q16658 493 aaKnown RBP22.03■■□□□ 1.12
MRPL55-230ENST00000489430 DHX32Q7L7V1 743 aaKnown RBP22.03■■□□□ 1.12
MRPL55-230ENST00000489430 KCNB2Q92953 911 aa22.03■■□□□ 1.12
MRPL55-230ENST00000489430 RMDN3Q96TC7 470 aa22.03■■□□□ 1.12
MRPL55-230ENST00000489430 LBHD1Q9BQE6 289 aaPredicted RBP22.03■■□□□ 1.12
MRPL55-230ENST00000489430 OPLAHO14841 1288 aa22.02■■□□□ 1.12
MRPL55-230ENST00000489430 DYNC1LI2O43237 492 aaPredicted RBP22.02■■□□□ 1.12
MRPL55-230ENST00000489430 TLE2Q04725 743 aa22.02■■□□□ 1.12
MRPL55-230ENST00000489430 HOMER1Q86YM7 354 aa22.02■■□□□ 1.12
MRPL55-230ENST00000489430 TBC1D5Q92609 795 aa22.02■■□□□ 1.12
MRPL55-230ENST00000489430 TAAR1Q96RJ0 339 aa22.02■■□□□ 1.12
MRPL55-230ENST00000489430 GPHNQ9NQX3 736 aaPredicted RBP22.02■■□□□ 1.12
MRPL55-230ENST00000489430 DDX49Q9Y6V7 483 aaKnown RBP22.02■■□□□ 1.12
MRPL55-230ENST00000489430 A0A0U1RQG5 324 aaPredicted RBP22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms